RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 DNAH3Q8TD57 4116 aa14.95□□□□□ -0.02
TSKU-201ENST00000333090 PRLHP81277 87 aa14.94□□□□□ -0.02
TSKU-201ENST00000333090 MGAM2Q2M2H8 2515 aa14.94□□□□□ -0.02
TSKU-201ENST00000333090 A0A087WSZ3 146 aa14.94□□□□□ -0.02
TSKU-201ENST00000333090 DNAH1Q9P2D7 4330 aa14.89□□□□□ -0.03
TSKU-201ENST00000333090 IGKV2-24A0A0C4DH68 120 aa14.88□□□□□ -0.03
TSKU-201ENST00000333090 Q1T7F1 81 aa14.88□□□□□ -0.03
TSKU-201ENST00000333090 RPL37AP61513 92 aaKnown RBP14.88□□□□□ -0.03
TSKU-201ENST00000333090 HUWE1Q7Z6Z7 4374 aaKnown RBP14.87□□□□□ -0.03
TSKU-201ENST00000333090 C1orf195Q5TG92 126 aa14.87□□□□□ -0.03
TSKU-201ENST00000333090 CSMD3Q7Z407 3707 aa14.87□□□□□ -0.03
TSKU-201ENST00000333090 CYP4F30PQ9H0H9 118 aa14.86□□□□□ -0.03
TSKU-201ENST00000333090 MP68P56378 58 aa14.86□□□□□ -0.03
TSKU-201ENST00000333090 PSPHP1O15172 72 aa14.85□□□□□ -0.03
TSKU-201ENST00000333090 NDUFB1O75438 58 aa14.84□□□□□ -0.03
TSKU-201ENST00000333090 DNAH10Q8IVF4 4471 aa14.83□□□□□ -0.03
TSKU-201ENST00000333090 A0A096LNI7 61 aa14.83□□□□□ -0.04
TSKU-201ENST00000333090 LINC00208Q96KT6 92 aa14.83□□□□□ -0.04
TSKU-201ENST00000333090 COL7A1Q02388 2944 aa14.82□□□□□ -0.04
TSKU-201ENST00000333090 STAB2Q8WWQ8 2551 aa14.8□□□□□ -0.04
TSKU-201ENST00000333090 UBE2AP49459 152 aa14.8□□□□□ -0.04
TSKU-201ENST00000333090 IGLV8-61A0A075B6I0 122 aa14.79□□□□□ -0.04
TSKU-201ENST00000333090 TRAV22A0A0B4J277 110 aa14.79□□□□□ -0.04
TSKU-201ENST00000333090 SRRM2Q9UQ35 2752 aaKnown RBP14.79□□□□□ -0.04
TSKU-201ENST00000333090 TENM2Q9NT68 2774 aa14.79□□□□□ -0.04
TSKU-201ENST00000333090 C16orf90A8MZG2 172 aa14.76□□□□□ -0.05
TSKU-201ENST00000333090 KRTAP29-1A8MX34 341 aaPredicted RBP14.75□□□□□ -0.05
TSKU-201ENST00000333090 CASC2Q6XLA1 102 aa14.74□□□□□ -0.05
TSKU-201ENST00000333090 B9D2Q9BPU9 175 aa14.73□□□□□ -0.05
TSKU-201ENST00000333090 H0Y9P7 68 aa14.72□□□□□ -0.05
TSKU-201ENST00000333090 PRR15Q8IV56 129 aa14.71□□□□□ -0.06
TSKU-201ENST00000333090 CNBPP62633 177 aaKnown RBP14.69□□□□□ -0.06
TSKU-201ENST00000333090 K7EIL1 84 aa14.68□□□□□ -0.06
TSKU-201ENST00000333090 KRTAP11-1Q8IUC1 163 aa14.68□□□□□ -0.06
TSKU-201ENST00000333090 A8MUN3 132 aa14.68□□□□□ -0.06
TSKU-201ENST00000333090 PHF5AQ7RTV0 110 aaKnown RBP14.67□□□□□ -0.06
TSKU-201ENST00000333090 KRTAP1-5Q9BYS1 174 aa14.67□□□□□ -0.06
TSKU-201ENST00000333090 V9GYY9 64 aa14.67□□□□□ -0.06
TSKU-201ENST00000333090 DNAH9Q9NYC9 4486 aa14.66□□□□□ -0.06
TSKU-201ENST00000333090 CHTF8P0CG12 524 aa14.66□□□□□ -0.06
TSKU-201ENST00000333090 A8MWP4 228 aa14.65□□□□□ -0.07
TSKU-201ENST00000333090 LINC00472Q9H8W2 130 aa14.63□□□□□ -0.07
TSKU-201ENST00000333090 DNAH7Q8WXX0 4024 aa14.62□□□□□ -0.07
TSKU-201ENST00000333090 SPANXA2-OT1Q8N9U9 137 aa14.61□□□□□ -0.07
TSKU-201ENST00000333090 H3BPC8 53 aa14.6□□□□□ -0.07
TSKU-201ENST00000333090 H0Y9J4 135 aa14.59□□□□□ -0.07
TSKU-201ENST00000333090 SPRR1BP22528 89 aa14.58□□□□□ -0.08
TSKU-201ENST00000333090 Q5VV11 94 aa14.55□□□□□ -0.08
TSKU-201ENST00000333090 C9orf163Q8N9P6 203 aa14.52□□□□□ -0.08
TSKU-201ENST00000333090 A8MU10 97 aa14.52□□□□□ -0.09
TSKU-201ENST00000333090 Q8N9P0 234 aaPredicted RBP14.52□□□□□ -0.09
TSKU-201ENST00000333090 MMP24-AS1A0A0U1RRL7 71 aa14.5□□□□□ -0.09
TSKU-201ENST00000333090 PMAIP1Q13794 54 aa14.5□□□□□ -0.09
TSKU-201ENST00000333090 UBE2DNLQ8IWF7 75 aa14.48□□□□□ -0.09
TSKU-201ENST00000333090 CHKB-CPT1BH3BT56 60 aa14.47□□□□□ -0.09
TSKU-201ENST00000333090 LIMD2Q9BT23 127 aa14.46□□□□□ -0.09
TSKU-201ENST00000333090 PRR15LQ9BU68 103 aa14.46□□□□□ -0.09
TSKU-201ENST00000333090 C14orf177Q52M58 125 aa14.45□□□□□ -0.1
TSKU-201ENST00000333090 SEC61GP60059 68 aa14.42□□□□□ -0.1
TSKU-201ENST00000333090 PCOTHQ58A44 107 aa14.42□□□□□ -0.1
TSKU-201ENST00000333090 COA5Q86WW8 74 aa14.42□□□□□ -0.1
TSKU-201ENST00000333090 PLECQ15149 4684 aaKnown RBP14.42□□□□□ -0.1
TSKU-201ENST00000333090 IGLV9-49A0A0B4J1Y8 123 aa14.41□□□□□ -0.1
TSKU-201ENST00000333090 IGLV7-46A0A075B6I9 117 aa14.39□□□□□ -0.11
TSKU-201ENST00000333090 PANO1I0J062 215 aa14.38□□□□□ -0.11
TSKU-201ENST00000333090 Q96NJ1 140 aa14.35□□□□□ -0.11
TSKU-201ENST00000333090 KRTAP13-1Q8IUC0 172 aa14.35□□□□□ -0.11
TSKU-201ENST00000333090 CD164Q04900 197 aa14.32□□□□□ -0.12
TSKU-201ENST00000333090 MDFIQ99750 246 aa14.32□□□□□ -0.12
TSKU-201ENST00000333090 TP53AIP1Q9HCN2 124 aa14.31□□□□□ -0.12
TSKU-201ENST00000333090 MOBPQ13875 183 aa14.3□□□□□ -0.12
TSKU-201ENST00000333090 NDUFS5O43920 106 aa14.3□□□□□ -0.12
TSKU-201ENST00000333090 C8orf17Q9NRJ1 99 aa14.3□□□□□ -0.12
TSKU-201ENST00000333090 APLNQ9ULZ1 77 aa14.3□□□□□ -0.12
TSKU-201ENST00000333090 ASB16-AS1Q495Z4 193 aa14.28□□□□□ -0.12
TSKU-201ENST00000333090 IGHV6-1A0A0B4J1U7 121 aa14.28□□□□□ -0.12
TSKU-201ENST00000333090 A6NED7 52 aa14.27□□□□□ -0.12
TSKU-201ENST00000333090 Q75L30 129 aa14.27□□□□□ -0.13
TSKU-201ENST00000333090 SPTSSBQ8NFR3 76 aa14.27□□□□□ -0.13
TSKU-201ENST00000333090 LOC101927531A0A1B0GV80 90 aa14.25□□□□□ -0.13
TSKU-201ENST00000333090 STARD9Q9P2P6 4700 aa14.24□□□□□ -0.13
TSKU-201ENST00000333090 LCA10Q71F78 164 aa14.23□□□□□ -0.13
TSKU-201ENST00000333090 Q6ZR54 194 aa14.23□□□□□ -0.13
TSKU-201ENST00000333090 SPAG11AQ6PDA7 123 aa14.22□□□□□ -0.13
TSKU-201ENST00000333090 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.22□□□□□ -0.13
TSKU-201ENST00000333090 PRKDCP78527 4128 aaKnown RBP14.21□□□□□ -0.13
TSKU-201ENST00000333090 A0A1B0GVX0 72 aa14.21□□□□□ -0.14
TSKU-201ENST00000333090 CDK2AP2O75956 126 aa14.19□□□□□ -0.14
TSKU-201ENST00000333090 DYNC2H1Q8NCM8 4307 aaKnown RBP14.19□□□□□ -0.14
TSKU-201ENST00000333090 NBDYA0A0U1RRE5 68 aa14.17□□□□□ -0.14
TSKU-201ENST00000333090 LINC00483Q53H64 154 aa14.15□□□□□ -0.14
TSKU-201ENST00000333090 SPACA4Q8TDM5 124 aa14.15□□□□□ -0.14
TSKU-201ENST00000333090 MRPL34Q9BQ48 92 aaKnown RBP14.15□□□□□ -0.14
TSKU-201ENST00000333090 ANAPC11Q9NYG5 84 aa14.15□□□□□ -0.14
TSKU-201ENST00000333090 A0A087X002 238 aa14.14□□□□□ -0.15
TSKU-201ENST00000333090 NOTCH2NLQ7Z3S9 236 aa14.14□□□□□ -0.15
TSKU-201ENST00000333090 Q6ZRN7 208 aaPredicted RBP14.13□□□□□ -0.15
TSKU-201ENST00000333090 ATP11AUNQ6ZP68 121 aa14.13□□□□□ -0.15
TSKU-201ENST00000333090 WWC2-AS2Q96NR7 200 aa14.13□□□□□ -0.15
TSKU-201ENST00000333090 LINC01558Q9Y6Z2 57 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms