RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 FRAS1Q86XX4 4008 aa12.68□□□□□ -0.38
RIPPLY3-201ENST00000329553 Q8N377 158 aa12.66□□□□□ -0.38
RIPPLY3-201ENST00000329553 EPM2AB3EWF7 344 aa12.65□□□□□ -0.38
RIPPLY3-201ENST00000329553 ERC2-IT1O76042 136 aa12.65□□□□□ -0.38
RIPPLY3-201ENST00000329553 SCXQ7RTU7 201 aa12.65□□□□□ -0.38
RIPPLY3-201ENST00000329553 C20orf197Q8N268 126 aa12.65□□□□□ -0.38
RIPPLY3-201ENST00000329553 DEFB105AQ8NG35 78 aa12.64□□□□□ -0.39
RIPPLY3-201ENST00000329553 IGLV5-48A0A075B6I7 105 aa12.63□□□□□ -0.39
RIPPLY3-201ENST00000329553 PRLHP81277 87 aa12.62□□□□□ -0.39
RIPPLY3-201ENST00000329553 ST20-AS1Q8NBB2 130 aa12.62□□□□□ -0.39
RIPPLY3-201ENST00000329553 KRTAP10-2P60368 255 aa12.61□□□□□ -0.39
RIPPLY3-201ENST00000329553 DNAH11Q96DT5 4516 aa12.61□□□□□ -0.39
RIPPLY3-201ENST00000329553 SACSQ9NZJ4 4579 aa12.58□□□□□ -0.4
RIPPLY3-201ENST00000329553 KLKP1Q107X0 134 aa12.57□□□□□ -0.4
RIPPLY3-201ENST00000329553 NREPQ16612 68 aa12.57□□□□□ -0.4
RIPPLY3-201ENST00000329553 PLAC8Q9NZF1 115 aa12.57□□□□□ -0.4
RIPPLY3-201ENST00000329553 FAT2Q9NYQ8 4349 aa12.56□□□□□ -0.4
RIPPLY3-201ENST00000329553 HIGD2AQ9BW72 106 aa12.56□□□□□ -0.4
RIPPLY3-201ENST00000329553 DNAH5Q8TE73 4624 aa12.55□□□□□ -0.4
RIPPLY3-201ENST00000329553 H7BZZ5 65 aa12.54□□□□□ -0.4
RIPPLY3-201ENST00000329553 IGKV4-1P06312 121 aa12.54□□□□□ -0.4
RIPPLY3-201ENST00000329553 DNAH8Q96JB1 4490 aa12.53□□□□□ -0.4
RIPPLY3-201ENST00000329553 A0A1B0GW54 56 aa12.53□□□□□ -0.4
RIPPLY3-201ENST00000329553 H0Y9J4 135 aa12.53□□□□□ -0.4
RIPPLY3-201ENST00000329553 OXTP01178 125 aa12.53□□□□□ -0.4
RIPPLY3-201ENST00000329553 Q8N9L7 120 aa12.52□□□□□ -0.41
RIPPLY3-201ENST00000329553 UBE2AP49459 152 aa12.51□□□□□ -0.41
RIPPLY3-201ENST00000329553 BPY2O14599 106 aa12.5□□□□□ -0.41
RIPPLY3-201ENST00000329553 PKD1P98161 4303 aa12.5□□□□□ -0.41
RIPPLY3-201ENST00000329553 LCE6AA0A183 80 aa12.5□□□□□ -0.41
RIPPLY3-201ENST00000329553 A0A1W2PNM2 257 aa12.5□□□□□ -0.41
RIPPLY3-201ENST00000329553 FAM30AQ9NZY2 134 aa12.49□□□□□ -0.41
RIPPLY3-201ENST00000329553 FAM236DA0A1B0GTK5 79 aa12.48□□□□□ -0.41
RIPPLY3-201ENST00000329553 FAM236CP0DP71 79 aa12.48□□□□□ -0.41
RIPPLY3-201ENST00000329553 KRTAP13-1Q8IUC0 172 aa12.48□□□□□ -0.41
RIPPLY3-201ENST00000329553 SNURFQ9Y675 71 aa12.48□□□□□ -0.41
RIPPLY3-201ENST00000329553 C1orf137Q5JT78 98 aa12.47□□□□□ -0.41
RIPPLY3-201ENST00000329553 SMIM29Q86T20 159 aa12.46□□□□□ -0.41
RIPPLY3-201ENST00000329553 Q8NBF4 154 aa12.45□□□□□ -0.42
RIPPLY3-201ENST00000329553 PSORS1C2Q9UIG4 136 aa12.45□□□□□ -0.42
RIPPLY3-201ENST00000329553 KRTAP10-1P60331 282 aa12.44□□□□□ -0.42
RIPPLY3-201ENST00000329553 SPRR4Q96PI1 79 aa12.44□□□□□ -0.42
RIPPLY3-201ENST00000329553 SRRM2Q9UQ35 2752 aaKnown RBP12.42□□□□□ -0.42
RIPPLY3-201ENST00000329553 CIRBP-AS1Q8TBR5 109 aa12.42□□□□□ -0.42
RIPPLY3-201ENST00000329553 OCR1Q9BZK8 76 aa12.42□□□□□ -0.42
RIPPLY3-201ENST00000329553 NDUFC1O43677 76 aa12.41□□□□□ -0.42
RIPPLY3-201ENST00000329553 F8WEM9 126 aa12.4□□□□□ -0.42
RIPPLY3-201ENST00000329553 Q6ZSA8 131 aa12.39□□□□□ -0.43
RIPPLY3-201ENST00000329553 TMEM254Q8TBM7 123 aa12.39□□□□□ -0.43
RIPPLY3-201ENST00000329553 SERP1Q9Y6X1 66 aa12.37□□□□□ -0.43
RIPPLY3-201ENST00000329553 SPRR1BP22528 89 aa12.37□□□□□ -0.43
RIPPLY3-201ENST00000329553 Q5XG85 94 aa12.34□□□□□ -0.43
RIPPLY3-201ENST00000329553 LINC00336Q6ZUF6 198 aa12.33□□□□□ -0.44
RIPPLY3-201ENST00000329553 ZNF861PO60384 105 aa12.32□□□□□ -0.44
RIPPLY3-201ENST00000329553 A0A0U1RQV1 116 aa12.31□□□□□ -0.44
RIPPLY3-201ENST00000329553 DSCR10P59022 87 aa12.31□□□□□ -0.44
RIPPLY3-201ENST00000329553 A0A0G2JQZ4 141 aa12.3□□□□□ -0.44
RIPPLY3-201ENST00000329553 RYR2Q92736 4967 aa12.3□□□□□ -0.44
RIPPLY3-201ENST00000329553 IGLV8-61A0A075B6I0 122 aa12.3□□□□□ -0.44
RIPPLY3-201ENST00000329553 ATP5EP56381 51 aaPredicted RBP12.29□□□□□ -0.44
RIPPLY3-201ENST00000329553 IGFL1Q6UW32 110 aa12.29□□□□□ -0.44
RIPPLY3-201ENST00000329553 IGLV7-43P04211 117 aa12.28□□□□□ -0.44
RIPPLY3-201ENST00000329553 KMT2CQ8NEZ4 4911 aaKnown RBP12.27□□□□□ -0.45
RIPPLY3-201ENST00000329553 LRP1BQ9NZR2 4599 aa12.26□□□□□ -0.45
RIPPLY3-201ENST00000329553 C4orf26Q17RF5 130 aa12.26□□□□□ -0.45
RIPPLY3-201ENST00000329553 K7EQZ3 153 aa12.25□□□□□ -0.45
RIPPLY3-201ENST00000329553 C5orf47Q569G3 176 aa12.25□□□□□ -0.45
RIPPLY3-201ENST00000329553 PKHD1P08F94 4074 aa12.25□□□□□ -0.45
RIPPLY3-201ENST00000329553 A0A1B0GVY2 172 aa12.23□□□□□ -0.45
RIPPLY3-201ENST00000329553 LINC00483Q53H64 154 aa12.23□□□□□ -0.45
RIPPLY3-201ENST00000329553 ZNF706Q9Y5V0 76 aaPredicted RBP12.22□□□□□ -0.45
RIPPLY3-201ENST00000329553 ANAPC11Q9NYG5 84 aa12.19□□□□□ -0.46
RIPPLY3-201ENST00000329553 IGLV9-49A0A0B4J1Y8 123 aa12.17□□□□□ -0.46
RIPPLY3-201ENST00000329553 HCG22E2RYF7 251 aa12.17□□□□□ -0.46
RIPPLY3-201ENST00000329553 HRCT1Q6UXD1 115 aa12.17□□□□□ -0.46
RIPPLY3-201ENST00000329553 A0A087WSZ3 146 aa12.16□□□□□ -0.46
RIPPLY3-201ENST00000329553 SMIM26A0A096LP01 95 aa12.16□□□□□ -0.46
RIPPLY3-201ENST00000329553 DYNC1H1Q14204 4646 aaKnown RBP12.16□□□□□ -0.46
RIPPLY3-201ENST00000329553 FP248Q71RG6 208 aaPredicted RBP12.13□□□□□ -0.47
RIPPLY3-201ENST00000329553 DEFB116Q30KQ4 102 aa12.11□□□□□ -0.47
RIPPLY3-201ENST00000329553 ZCCHC13Q8WW36 166 aaKnown RBP12.11□□□□□ -0.47
RIPPLY3-201ENST00000329553 VPS13BQ7Z7G8 4022 aa12.1□□□□□ -0.47
RIPPLY3-201ENST00000329553 MOBPQ13875 183 aa12.07□□□□□ -0.48
RIPPLY3-201ENST00000329553 RPL37AP61513 92 aaKnown RBP12.05□□□□□ -0.48
RIPPLY3-201ENST00000329553 KRTAP29-1A8MX34 341 aaPredicted RBP12.03□□□□□ -0.48
RIPPLY3-201ENST00000329553 WFDC13Q8IUB5 93 aa12.02□□□□□ -0.48
RIPPLY3-201ENST00000329553 FAM229BQ4G0N7 80 aa12.02□□□□□ -0.49
RIPPLY3-201ENST00000329553 LINC00472Q9H8W2 130 aa12.02□□□□□ -0.49
RIPPLY3-201ENST00000329553 APOBP04114 4563 aaKnown RBP12□□□□□ -0.49
RIPPLY3-201ENST00000329553 SMR3BP02814 79 aaPredicted RBP12□□□□□ -0.49
RIPPLY3-201ENST00000329553 PRR15Q8IV56 129 aa11.99□□□□□ -0.49
RIPPLY3-201ENST00000329553 RYR3Q15413 4870 aa11.99□□□□□ -0.49
RIPPLY3-201ENST00000329553 A8MWP4 228 aa11.97□□□□□ -0.49
RIPPLY3-201ENST00000329553 A0A087X002 238 aa11.95□□□□□ -0.5
RIPPLY3-201ENST00000329553 hDV103S1A0JD37 113 aa11.94□□□□□ -0.5
RIPPLY3-201ENST00000329553 KRTAP1-4P0C5Y4 121 aa11.94□□□□□ -0.5
RIPPLY3-201ENST00000329553 CASC2Q6XLA1 102 aa11.94□□□□□ -0.5
RIPPLY3-201ENST00000329553 MP68P56378 58 aa11.92□□□□□ -0.5
RIPPLY3-201ENST00000329553 SSBP3-AS1Q7Z2R9 100 aa11.92□□□□□ -0.5
RIPPLY3-201ENST00000329553 KRTAP13-2Q52LG2 175 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms