RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 TOMM7Q9P0U1 55 aa0.64□□□□□ -2.31
CBX3P1-201ENST00000325243 WNK1Q9H4A3 2382 aa0.64□□□□□ -2.31
CBX3P1-201ENST00000325243 PRUNE2Q8WUY3 3088 aa0.64□□□□□ -2.31
CBX3P1-201ENST00000325243 SPTBN5Q9NRC6 3674 aaKnown RBP0.64□□□□□ -2.31
CBX3P1-201ENST00000325243 SRCAPQ6ZRS2 3230 aa0.64□□□□□ -2.31
CBX3P1-201ENST00000325243 UTRNP46939 3433 aa0.63□□□□□ -2.31
CBX3P1-201ENST00000325243 PCNX1Q96RV3 2341 aa0.63□□□□□ -2.31
CBX3P1-201ENST00000325243 AKAP9Q99996 3911 aa0.63□□□□□ -2.31
CBX3P1-201ENST00000325243 A0A087WTM6 91 aa0.63□□□□□ -2.31
CBX3P1-201ENST00000325243 SPTY2D1-AS1A0A0U1RR47 76 aa0.63□□□□□ -2.31
CBX3P1-201ENST00000325243 K7EIM0 57 aa0.63□□□□□ -2.31
CBX3P1-201ENST00000325243 K7EQZ3 153 aa0.63□□□□□ -2.31
CBX3P1-201ENST00000325243 APELAP0DMC3 54 aa0.63□□□□□ -2.31
CBX3P1-201ENST00000325243 SSBP3-AS1Q7Z2R9 100 aa0.63□□□□□ -2.31
CBX3P1-201ENST00000325243 WFDC10BQ8IUB3 73 aa0.63□□□□□ -2.31
CBX3P1-201ENST00000325243 WFDC13Q8IUB5 93 aa0.63□□□□□ -2.31
CBX3P1-201ENST00000325243 COX14Q96I36 57 aa0.63□□□□□ -2.31
CBX3P1-201ENST00000325243 Q96NJ1 140 aa0.63□□□□□ -2.31
CBX3P1-201ENST00000325243 PRO3102Q9H379 93 aa0.63□□□□□ -2.31
CBX3P1-201ENST00000325243 TP53AIP1Q9HCN2 124 aa0.63□□□□□ -2.31
CBX3P1-201ENST00000325243 SPTBN4Q9H254 2564 aa0.63□□□□□ -2.31
CBX3P1-201ENST00000325243 ROS1P08922 2347 aa0.63□□□□□ -2.31
CBX3P1-201ENST00000325243 TENM2Q9NT68 2774 aa0.62□□□□□ -2.31
CBX3P1-201ENST00000325243 C5orf42Q9H799 3197 aa0.62□□□□□ -2.31
CBX3P1-201ENST00000325243 CENPFP49454 3210 aa0.62□□□□□ -2.31
CBX3P1-201ENST00000325243 ANGP03950 147 aaKnown RBP0.62□□□□□ -2.31
CBX3P1-201ENST00000325243 DEFB110Q30KQ9 67 aa0.62□□□□□ -2.31
CBX3P1-201ENST00000325243 MINOS1Q5TGZ0 78 aa0.62□□□□□ -2.31
CBX3P1-201ENST00000325243 C6orf48Q9UBA6 75 aa0.62□□□□□ -2.31
CBX3P1-201ENST00000325243 RP1L1Q8IWN7 2480 aaPredicted RBP0.62□□□□□ -2.31
CBX3P1-201ENST00000325243 CFAP54Q96N23 3096 aa0.62□□□□□ -2.31
CBX3P1-201ENST00000325243 FAM186AA6NE01 2351 aa0.62□□□□□ -2.31
CBX3P1-201ENST00000325243 LYSTQ99698 3801 aa0.62□□□□□ -2.31
CBX3P1-201ENST00000325243 UBR5O95071 2799 aaPredicted RBP0.62□□□□□ -2.31
CBX3P1-201ENST00000325243 NBEAQ8NFP9 2946 aa0.61□□□□□ -2.31
CBX3P1-201ENST00000325243 VPS13AQ96RL7 3174 aa0.61□□□□□ -2.31
CBX3P1-201ENST00000325243 CCDC168Q8NDH2 2452 aa0.61□□□□□ -2.31
CBX3P1-201ENST00000325243 TNRC18O15417 2968 aaPredicted RBP0.61□□□□□ -2.31
CBX3P1-201ENST00000325243 REV3LO60673 3130 aa0.61□□□□□ -2.31
CBX3P1-201ENST00000325243 CFAP47Q6ZTR5 3102 aa0.61□□□□□ -2.31
CBX3P1-201ENST00000325243 DMDP11532 3685 aa0.61□□□□□ -2.31
CBX3P1-201ENST00000325243 SZT2Q5T011 3432 aa0.61□□□□□ -2.31
CBX3P1-201ENST00000325243 IGLV5-48A0A075B6I7 105 aa0.61□□□□□ -2.31
CBX3P1-201ENST00000325243 A8MTW9 85 aa0.61□□□□□ -2.31
CBX3P1-201ENST00000325243 KAAG1Q9UBP8 84 aa0.61□□□□□ -2.31
CBX3P1-201ENST00000325243 GVINP1Q7Z2Y8 2422 aa0.61□□□□□ -2.31
CBX3P1-201ENST00000325243 TRIOO75962 3097 aa0.61□□□□□ -2.31
CBX3P1-201ENST00000325243 FRYLO94915 3013 aa0.61□□□□□ -2.31
CBX3P1-201ENST00000325243 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
CBX3P1-201ENST00000325243 NCOR1O75376 2440 aa0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 FAM208BQ5VWN6 2430 aa0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 SPG11Q96JI7 2443 aa0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 ASH1LQ9NR48 2969 aaKnown RBP0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 MKI67P46013 3256 aaKnown RBP0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 ZFHX4Q86UP3 3567 aa0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 PIEZO2Q9H5I5 2752 aa0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 OTOGQ6ZRI0 2925 aa0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 LYNX1G3V0Z9 82 aa0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 LY6G6CO95867 125 aa0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 DEFB131AP59861 70 aa0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 Q6ZRX8 168 aa0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 DEFB105AQ8NG35 78 aa0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 PLAC4Q8WY50 150 aa0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 CRIPTQ9P021 101 aa0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 CMYA5Q8N3K9 4069 aa0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 DNAH12Q6ZR08 3092 aa0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 SPENQ96T58 3664 aaKnown RBP0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 C2CD3Q4AC94 2353 aa0.6□□□□□ -2.31
CBX3P1-201ENST00000325243 DSPP15924 2871 aaKnown RBP0.59□□□□□ -2.31
CBX3P1-201ENST00000325243 SRRM2Q9UQ35 2752 aaKnown RBP0.59□□□□□ -2.31
CBX3P1-201ENST00000325243 ZNF462Q96JM2 2506 aa0.59□□□□□ -2.31
CBX3P1-201ENST00000325243 NCOR2Q9Y618 2525 aa0.59□□□□□ -2.31
CBX3P1-201ENST00000325243 NBASA2RRP1 2371 aa0.59□□□□□ -2.31
CBX3P1-201ENST00000325243 CACNA1HO95180 2353 aa0.59□□□□□ -2.31
CBX3P1-201ENST00000325243 DMXL1Q9Y485 3027 aa0.59□□□□□ -2.31
CBX3P1-201ENST00000325243 MMP24-AS1A0A0U1RRL7 71 aa0.59□□□□□ -2.31
CBX3P1-201ENST00000325243 G3V318 75 aa0.59□□□□□ -2.31
CBX3P1-201ENST00000325243 SPINK13Q1W4C9 94 aa0.59□□□□□ -2.31
CBX3P1-201ENST00000325243 DEFB108BQ8NET1 73 aa0.59□□□□□ -2.31
CBX3P1-201ENST00000325243 MRPL34Q9BQ48 92 aaKnown RBP0.59□□□□□ -2.31
CBX3P1-201ENST00000325243 PRRC2CQ9Y520 2896 aaKnown RBP0.59□□□□□ -2.32
CBX3P1-201ENST00000325243 CELSR2Q9HCU4 2923 aa0.59□□□□□ -2.32
CBX3P1-201ENST00000325243 SPEGQ15772 3267 aa0.59□□□□□ -2.32
CBX3P1-201ENST00000325243 COL6A5A8TX70 2615 aa0.59□□□□□ -2.32
CBX3P1-201ENST00000325243 HTTP42858 3142 aa0.59□□□□□ -2.32
CBX3P1-201ENST00000325243 ZZEF1O43149 2961 aa0.59□□□□□ -2.32
CBX3P1-201ENST00000325243 FRAS1Q86XX4 4008 aa0.59□□□□□ -2.32
CBX3P1-201ENST00000325243 ABCA2Q9BZC7 2435 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 LAMA2P24043 3122 aaKnown RBP0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 KALRNO60229 2985 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 EP400Q96L91 3159 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 CEP290O15078 2479 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 TTC28Q96AY4 2481 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 BSNQ9UPA5 3926 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 CHD6Q8TD26 2715 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 DCHS1Q96JQ0 3298 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 GVQW2A0A096LPI5 108 aaPredicted RBP0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 H0YAA0 97 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 HTN1P15515 57 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 CD52P31358 61 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms