RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 A8MUU9 505 aa9.77□□□□□ -0.85
SSNA1-201ENST00000322310 FAM236CP0DP71 79 aa9.77□□□□□ -0.85
SSNA1-201ENST00000322310 Q6JHZ5 121 aa9.77□□□□□ -0.85
SSNA1-201ENST00000322310 KRTAP19-6Q3LI70 58 aa9.75□□□□□ -0.85
SSNA1-201ENST00000322310 SMIM11BQ8TCY0 68 aa9.75□□□□□ -0.85
SSNA1-201ENST00000322310 SYS1-DBNDD2H3BUS1 97 aa9.74□□□□□ -0.85
SSNA1-201ENST00000322310 LST1O00453 97 aa9.74□□□□□ -0.85
SSNA1-201ENST00000322310 LINC00846Q9NV44 126 aa9.73□□□□□ -0.85
SSNA1-201ENST00000322310 TRAV13-2A0A0B4J235 113 aa9.71□□□□□ -0.86
SSNA1-201ENST00000322310 OCIAD2Q56VL3 154 aa9.71□□□□□ -0.86
SSNA1-201ENST00000322310 SCGB1D4Q6XE38 83 aa9.71□□□□□ -0.86
SSNA1-201ENST00000322310 Q6ZQY7 126 aa9.7□□□□□ -0.86
SSNA1-201ENST00000322310 KRTAP16-1A8MUX0 517 aa9.69□□□□□ -0.86
SSNA1-201ENST00000322310 LINC01545Q5VT33 79 aa9.69□□□□□ -0.86
SSNA1-201ENST00000322310 IFITM1P13164 125 aa9.68□□□□□ -0.86
SSNA1-201ENST00000322310 LINC00575Q6W349 94 aa9.68□□□□□ -0.86
SSNA1-201ENST00000322310 MUSTN1Q8IVN3 82 aa9.68□□□□□ -0.86
SSNA1-201ENST00000322310 COPS9Q8WXC6 57 aa9.68□□□□□ -0.86
SSNA1-201ENST00000322310 KRTAP6-3Q3LI67 103 aa9.67□□□□□ -0.86
SSNA1-201ENST00000322310 MPLKIPQ8TAP9 179 aa9.64□□□□□ -0.87
SSNA1-201ENST00000322310 hADV29S1A0JD25 119 aa9.63□□□□□ -0.87
SSNA1-201ENST00000322310 H3BUT2 72 aa9.63□□□□□ -0.87
SSNA1-201ENST00000322310 HRES1P13985 223 aa9.62□□□□□ -0.87
SSNA1-201ENST00000322310 DSCR10P59022 87 aa9.62□□□□□ -0.87
SSNA1-201ENST00000322310 VAMP3Q15836 100 aa9.62□□□□□ -0.87
SSNA1-201ENST00000322310 RBM12B-AS1Q9P1G2 102 aa9.62□□□□□ -0.87
SSNA1-201ENST00000322310 PET117Q6UWS5 81 aa9.61□□□□□ -0.87
SSNA1-201ENST00000322310 Q6ZVH6 145 aa9.61□□□□□ -0.87
SSNA1-201ENST00000322310 SS18L2Q9UHA2 77 aa9.59□□□□□ -0.87
SSNA1-201ENST00000322310 ANKRD39Q53RE8 183 aa9.57□□□□□ -0.88
SSNA1-201ENST00000322310 SNHG12Q9BXW3 62 aa9.56□□□□□ -0.88
SSNA1-201ENST00000322310 C3orf79P0CE67 100 aa9.54□□□□□ -0.88
SSNA1-201ENST00000322310 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.54□□□□□ -0.88
SSNA1-201ENST00000322310 COLCA2A8K830 154 aa9.52□□□□□ -0.89
SSNA1-201ENST00000322310 NOTCH2NLQ7Z3S9 236 aa9.52□□□□□ -0.89
SSNA1-201ENST00000322310 A0A087WSZ3 146 aa9.51□□□□□ -0.89
SSNA1-201ENST00000322310 PPDPFLQ8WWR9 84 aa9.51□□□□□ -0.89
SSNA1-201ENST00000322310 SCGB1D1O95968 90 aa9.5□□□□□ -0.89
SSNA1-201ENST00000322310 TEN1Q86WV5 123 aa9.49□□□□□ -0.89
SSNA1-201ENST00000322310 KRTDAPP60985 99 aa9.48□□□□□ -0.89
SSNA1-201ENST00000322310 ATOH7Q8N100 152 aa9.48□□□□□ -0.89
SSNA1-201ENST00000322310 SIGMAR1Q99720 223 aa9.48□□□□□ -0.89
SSNA1-201ENST00000322310 HIST1H2BKO60814 126 aa9.47□□□□□ -0.89
SSNA1-201ENST00000322310 HIST1H2BJP06899 126 aa9.47□□□□□ -0.89
SSNA1-201ENST00000322310 HIST1H2BOP23527 126 aa9.47□□□□□ -0.89
SSNA1-201ENST00000322310 HIST1H2BBP33778 126 aa9.47□□□□□ -0.89
SSNA1-201ENST00000322310 HIST1H2BDP58876 126 aa9.47□□□□□ -0.89
SSNA1-201ENST00000322310 HIST1H2BCP62807 126 aa9.47□□□□□ -0.89
SSNA1-201ENST00000322310 HIST2H2BEQ16778 126 aa9.47□□□□□ -0.89
SSNA1-201ENST00000322310 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.47□□□□□ -0.89
SSNA1-201ENST00000322310 HIST1H2BHQ93079 126 aa9.47□□□□□ -0.89
SSNA1-201ENST00000322310 HIST1H2BNQ99877 126 aa9.47□□□□□ -0.89
SSNA1-201ENST00000322310 HIST1H2BMQ99879 126 aa9.47□□□□□ -0.89
SSNA1-201ENST00000322310 LINC00313P59037 77 aa9.46□□□□□ -0.9
SSNA1-201ENST00000322310 NEBP20929 6669 aa9.42□□□□□ -0.9
SSNA1-201ENST00000322310 Q8N9P0 234 aaPredicted RBP9.42□□□□□ -0.9
SSNA1-201ENST00000322310 MTURNQ8N3F0 131 aa9.4□□□□□ -0.9
SSNA1-201ENST00000322310 BVES-AS1Q5T3Y7 98 aa9.39□□□□□ -0.91
SSNA1-201ENST00000322310 TMA7Q9Y2S6 64 aaKnown RBP9.38□□□□□ -0.91
SSNA1-201ENST00000322310 NDUFV3P56181 108 aaKnown RBP9.37□□□□□ -0.91
SSNA1-201ENST00000322310 C12orf57Q99622 126 aa9.37□□□□□ -0.91
SSNA1-201ENST00000322310 A8MWP4 228 aa9.36□□□□□ -0.91
SSNA1-201ENST00000322310 IGKV4-1P06312 121 aa9.36□□□□□ -0.91
SSNA1-201ENST00000322310 A0A1W2PNM2 257 aa9.32□□□□□ -0.92
SSNA1-201ENST00000322310 H3BMG7 143 aa9.32□□□□□ -0.92
SSNA1-201ENST00000322310 MUC12Q9UKN1 5478 aa9.31□□□□□ -0.92
SSNA1-201ENST00000322310 DEFB116Q30KQ4 102 aa9.3□□□□□ -0.92
SSNA1-201ENST00000322310 IGHV6-1A0A0B4J1U7 121 aa9.28□□□□□ -0.92
SSNA1-201ENST00000322310 SPINK7P58062 85 aa9.27□□□□□ -0.93
SSNA1-201ENST00000322310 KRTAP20-1Q3LI63 56 aa9.27□□□□□ -0.93
SSNA1-201ENST00000322310 FAM218AQ96MZ4 157 aa9.27□□□□□ -0.93
SSNA1-201ENST00000322310 COA6Q5JTJ3 125 aaKnown RBP9.25□□□□□ -0.93
SSNA1-201ENST00000322310 FABP2P12104 132 aa9.23□□□□□ -0.93
SSNA1-201ENST00000322310 SNRPEP62304 92 aaKnown RBP9.23□□□□□ -0.93
SSNA1-201ENST00000322310 SNCGO76070 127 aa9.22□□□□□ -0.93
SSNA1-201ENST00000322310 ZCCHC13Q8WW36 166 aaKnown RBP9.22□□□□□ -0.93
SSNA1-201ENST00000322310 LINC00472Q9H8W2 130 aa9.21□□□□□ -0.94
SSNA1-201ENST00000322310 S100A6P06703 90 aa9.19□□□□□ -0.94
SSNA1-201ENST00000322310 WFDC13Q8IUB5 93 aa9.19□□□□□ -0.94
SSNA1-201ENST00000322310 HIST1H4GQ99525 98 aa9.19□□□□□ -0.94
SSNA1-201ENST00000322310 TRBV7-4A0A0J9YYF1 115 aa9.18□□□□□ -0.94
SSNA1-201ENST00000322310 A0A1B0GV72 72 aa9.17□□□□□ -0.94
SSNA1-201ENST00000322310 H0YGX0 51 aa9.17□□□□□ -0.94
SSNA1-201ENST00000322310 LOC105371267A0A1B0GV96 52 aa9.15□□□□□ -0.94
SSNA1-201ENST00000322310 ANKRD29Q8N6D5 301 aa9.15□□□□□ -0.94
SSNA1-201ENST00000322310 A0A1B0GVX0 72 aa9.13□□□□□ -0.95
SSNA1-201ENST00000322310 C8orf87E5RJ46 101 aa9.13□□□□□ -0.95
SSNA1-201ENST00000322310 HSBP1L1C9JCN9 74 aa9.12□□□□□ -0.95
SSNA1-201ENST00000322310 RAB37Q96AX2 223 aa9.12□□□□□ -0.95
SSNA1-201ENST00000322310 GHRHP01286 108 aa9.1□□□□□ -0.95
SSNA1-201ENST00000322310 A0A1B0GX51 115 aa9.07□□□□□ -0.96
SSNA1-201ENST00000322310 A6NN06 94 aa9.07□□□□□ -0.96
SSNA1-201ENST00000322310 TRACP01848 142 aa9.07□□□□□ -0.96
SSNA1-201ENST00000322310 CCKP06307 115 aa9.07□□□□□ -0.96
SSNA1-201ENST00000322310 S100A2P29034 98 aa9.05□□□□□ -0.96
SSNA1-201ENST00000322310 A0A0B4J2C4 111 aa9.03□□□□□ -0.96
SSNA1-201ENST00000322310 HIST3H2BBQ8N257 126 aa9.01□□□□□ -0.97
SSNA1-201ENST00000322310 H1FX-AS1Q4G0G2 97 aa8.99□□□□□ -0.97
SSNA1-201ENST00000322310 LYRM7Q5U5X0 104 aa8.99□□□□□ -0.97
SSNA1-201ENST00000322310 HIST1H2BLQ99880 126 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms