RNA–Protein interactions for RNA: ENST00000317991.9

GRAMD1A-201, Transcript of GRAM domain containing 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GRAMD1A, Length 2,695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-201ENST00000317991 COL6A5A8TX70 2615 aa14.11□□□□□ -0.15
GRAMD1A-201ENST00000317991 A0A087WSZ3 146 aa14.1□□□□□ -0.15
GRAMD1A-201ENST00000317991 TRAV22A0A0B4J277 110 aa14.1□□□□□ -0.15
GRAMD1A-201ENST00000317991 PRLHP81277 87 aa14.09□□□□□ -0.15
GRAMD1A-201ENST00000317991 DNAH10Q8IVF4 4471 aa14.09□□□□□ -0.15
GRAMD1A-201ENST00000317991 CYP4F30PQ9H0H9 118 aa14.08□□□□□ -0.16
GRAMD1A-201ENST00000317991 LINC00588Q9Y4M8 146 aa14.08□□□□□ -0.16
GRAMD1A-201ENST00000317991 KRTAP24-1Q3LI83 254 aa14.08□□□□□ -0.16
GRAMD1A-201ENST00000317991 LINC00208Q96KT6 92 aa14.06□□□□□ -0.16
GRAMD1A-201ENST00000317991 V9GYY9 64 aa14.05□□□□□ -0.16
GRAMD1A-201ENST00000317991 CSMD3Q7Z407 3707 aa14.03□□□□□ -0.16
GRAMD1A-201ENST00000317991 CMYA5Q8N3K9 4069 aa14.03□□□□□ -0.16
GRAMD1A-201ENST00000317991 PRR15Q8IV56 129 aa14.02□□□□□ -0.16
GRAMD1A-201ENST00000317991 A8MUN3 132 aa14.01□□□□□ -0.17
GRAMD1A-201ENST00000317991 MP68P56378 58 aa14.01□□□□□ -0.17
GRAMD1A-201ENST00000317991 IGKV2-24A0A0C4DH68 120 aa14□□□□□ -0.17
GRAMD1A-201ENST00000317991 NDUFB1O75438 58 aa13.98□□□□□ -0.17
GRAMD1A-201ENST00000317991 LYSTQ99698 3801 aa13.98□□□□□ -0.17
GRAMD1A-201ENST00000317991 A8MU10 97 aa13.98□□□□□ -0.17
GRAMD1A-201ENST00000317991 KRTAP29-1A8MX34 341 aaPredicted RBP13.97□□□□□ -0.17
GRAMD1A-201ENST00000317991 B9D2Q9BPU9 175 aa13.96□□□□□ -0.17
GRAMD1A-201ENST00000317991 A0A096LNI7 61 aa13.95□□□□□ -0.18
GRAMD1A-201ENST00000317991 NBEAL1Q6ZS30 2694 aa13.93□□□□□ -0.18
GRAMD1A-201ENST00000317991 H0Y9P7 68 aa13.93□□□□□ -0.18
GRAMD1A-201ENST00000317991 IGLV8-61A0A075B6I0 122 aa13.92□□□□□ -0.18
GRAMD1A-201ENST00000317991 UBE2AP49459 152 aa13.92□□□□□ -0.18
GRAMD1A-201ENST00000317991 CASC2Q6XLA1 102 aa13.92□□□□□ -0.18
GRAMD1A-201ENST00000317991 CNBPP62633 177 aaKnown RBP13.91□□□□□ -0.18
GRAMD1A-201ENST00000317991 KRTAP11-1Q8IUC1 163 aa13.89□□□□□ -0.19
GRAMD1A-201ENST00000317991 SEC61GP60059 68 aa13.89□□□□□ -0.19
GRAMD1A-201ENST00000317991 Q5VV11 94 aa13.88□□□□□ -0.19
GRAMD1A-201ENST00000317991 PMAIP1Q13794 54 aa13.87□□□□□ -0.19
GRAMD1A-201ENST00000317991 DNAH9Q9NYC9 4486 aa13.86□□□□□ -0.19
GRAMD1A-201ENST00000317991 DNAH3Q8TD57 4116 aa13.85□□□□□ -0.19
GRAMD1A-201ENST00000317991 COL7A1Q02388 2944 aa13.83□□□□□ -0.2
GRAMD1A-201ENST00000317991 C16orf90A8MZG2 172 aa13.83□□□□□ -0.2
GRAMD1A-201ENST00000317991 Q8N9P0 234 aaPredicted RBP13.82□□□□□ -0.2
GRAMD1A-201ENST00000317991 PHF5AQ7RTV0 110 aaKnown RBP13.82□□□□□ -0.2
GRAMD1A-201ENST00000317991 LINC00472Q9H8W2 130 aa13.82□□□□□ -0.2
GRAMD1A-201ENST00000317991 HUWE1Q7Z6Z7 4374 aaKnown RBP13.81□□□□□ -0.2
GRAMD1A-201ENST00000317991 CHTF8P0CG12 524 aa13.81□□□□□ -0.2
GRAMD1A-201ENST00000317991 SPANXA2-OT1Q8N9U9 137 aa13.81□□□□□ -0.2
GRAMD1A-201ENST00000317991 A8MWP4 228 aa13.8□□□□□ -0.2
GRAMD1A-201ENST00000317991 KRTAP1-5Q9BYS1 174 aa13.8□□□□□ -0.2
GRAMD1A-201ENST00000317991 CHKB-CPT1BH3BT56 60 aa13.77□□□□□ -0.2
GRAMD1A-201ENST00000317991 TENM2Q9NT68 2774 aa13.77□□□□□ -0.2
GRAMD1A-201ENST00000317991 H0Y9J4 135 aa13.77□□□□□ -0.21
GRAMD1A-201ENST00000317991 C9orf163Q8N9P6 203 aa13.77□□□□□ -0.21
GRAMD1A-201ENST00000317991 PRR15LQ9BU68 103 aa13.76□□□□□ -0.21
GRAMD1A-201ENST00000317991 H3BPC8 53 aa13.75□□□□□ -0.21
GRAMD1A-201ENST00000317991 MGAM2Q2M2H8 2515 aa13.74□□□□□ -0.21
GRAMD1A-201ENST00000317991 MMP24-AS1A0A0U1RRL7 71 aa13.71□□□□□ -0.22
GRAMD1A-201ENST00000317991 LIMD2Q9BT23 127 aa13.7□□□□□ -0.22
GRAMD1A-201ENST00000317991 STAB2Q8WWQ8 2551 aa13.7□□□□□ -0.22
GRAMD1A-201ENST00000317991 SPRR1BP22528 89 aa13.69□□□□□ -0.22
GRAMD1A-201ENST00000317991 PCOTHQ58A44 107 aa13.68□□□□□ -0.22
GRAMD1A-201ENST00000317991 COA5Q86WW8 74 aa13.68□□□□□ -0.22
GRAMD1A-201ENST00000317991 MDFIQ99750 246 aa13.68□□□□□ -0.22
GRAMD1A-201ENST00000317991 IGLV7-46A0A075B6I9 117 aa13.62□□□□□ -0.23
GRAMD1A-201ENST00000317991 LCA10Q71F78 164 aa13.62□□□□□ -0.23
GRAMD1A-201ENST00000317991 SPTSSBQ8NFR3 76 aa13.62□□□□□ -0.23
GRAMD1A-201ENST00000317991 DNAH7Q8WXX0 4024 aa13.62□□□□□ -0.23
GRAMD1A-201ENST00000317991 CD164Q04900 197 aa13.6□□□□□ -0.23
GRAMD1A-201ENST00000317991 PANO1I0J062 215 aa13.57□□□□□ -0.24
GRAMD1A-201ENST00000317991 IGLV9-49A0A0B4J1Y8 123 aa13.57□□□□□ -0.24
GRAMD1A-201ENST00000317991 A6NED7 52 aa13.57□□□□□ -0.24
GRAMD1A-201ENST00000317991 Q96NJ1 140 aa13.57□□□□□ -0.24
GRAMD1A-201ENST00000317991 Q75L30 129 aa13.55□□□□□ -0.24
GRAMD1A-201ENST00000317991 SPAG11AQ6PDA7 123 aa13.54□□□□□ -0.24
GRAMD1A-201ENST00000317991 LOC101927531A0A1B0GV80 90 aa13.53□□□□□ -0.24
GRAMD1A-201ENST00000317991 K7EIL1 84 aa13.5□□□□□ -0.25
GRAMD1A-201ENST00000317991 NDUFS5O43920 106 aa13.5□□□□□ -0.25
GRAMD1A-201ENST00000317991 ASB16-AS1Q495Z4 193 aa13.49□□□□□ -0.25
GRAMD1A-201ENST00000317991 KRTAP13-1Q8IUC0 172 aa13.49□□□□□ -0.25
GRAMD1A-201ENST00000317991 UBE2DNLQ8IWF7 75 aa13.49□□□□□ -0.25
GRAMD1A-201ENST00000317991 C8orf17Q9NRJ1 99 aa13.49□□□□□ -0.25
GRAMD1A-201ENST00000317991 IGHV6-1A0A0B4J1U7 121 aa13.48□□□□□ -0.25
GRAMD1A-201ENST00000317991 MOBPQ13875 183 aa13.47□□□□□ -0.25
GRAMD1A-201ENST00000317991 DNHD1Q96M86 4753 aa13.45□□□□□ -0.26
GRAMD1A-201ENST00000317991 TP53AIP1Q9HCN2 124 aa13.45□□□□□ -0.26
GRAMD1A-201ENST00000317991 ATP11AUNQ6ZP68 121 aa13.45□□□□□ -0.26
GRAMD1A-201ENST00000317991 Q6ZR54 194 aa13.44□□□□□ -0.26
GRAMD1A-201ENST00000317991 C14orf177Q52M58 125 aa13.44□□□□□ -0.26
GRAMD1A-201ENST00000317991 A0A087X002 238 aa13.42□□□□□ -0.26
GRAMD1A-201ENST00000317991 NOTCH2NLQ7Z3S9 236 aa13.42□□□□□ -0.26
GRAMD1A-201ENST00000317991 KTN1-AS1Q86SY8 53 aa13.42□□□□□ -0.26
GRAMD1A-201ENST00000317991 PLECQ15149 4684 aaKnown RBP13.41□□□□□ -0.26
GRAMD1A-201ENST00000317991 FRAS1Q86XX4 4008 aa13.41□□□□□ -0.26
GRAMD1A-201ENST00000317991 HRES1P13985 223 aa13.41□□□□□ -0.26
GRAMD1A-201ENST00000317991 LINC01558Q9Y6Z2 57 aa13.4□□□□□ -0.26
GRAMD1A-201ENST00000317991 ANAPC11Q9NYG5 84 aa13.39□□□□□ -0.27
GRAMD1A-201ENST00000317991 CDC42SE1Q9NRR8 79 aa13.38□□□□□ -0.27
GRAMD1A-201ENST00000317991 A0A1B0GVX0 72 aa13.38□□□□□ -0.27
GRAMD1A-201ENST00000317991 PLAC8Q9NZF1 115 aa13.38□□□□□ -0.27
GRAMD1A-201ENST00000317991 A6NN06 94 aa13.36□□□□□ -0.27
GRAMD1A-201ENST00000317991 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.36□□□□□ -0.27
GRAMD1A-201ENST00000317991 SPINK7P58062 85 aa13.36□□□□□ -0.27
GRAMD1A-201ENST00000317991 APLNQ9ULZ1 77 aa13.36□□□□□ -0.27
GRAMD1A-201ENST00000317991 DNAH8Q96JB1 4490 aa13.35□□□□□ -0.27
GRAMD1A-201ENST00000317991 MRPL34Q9BQ48 92 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms