RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 HRNRQ86YZ3 2850 aaPredicted RBP3.98□□□□□ -1.77
SEC22A-201ENST00000309934 TNP2Q05952 138 aa3.98□□□□□ -1.77
SEC22A-201ENST00000309934 ITPR1Q14643 2758 aa3.98□□□□□ -1.77
SEC22A-201ENST00000309934 LINC00575Q6W349 94 aa3.98□□□□□ -1.77
SEC22A-201ENST00000309934 Q6ZQY7 126 aa3.98□□□□□ -1.77
SEC22A-201ENST00000309934 WFDC13Q8IUB5 93 aa3.98□□□□□ -1.77
SEC22A-201ENST00000309934 SPINT4Q6UDR6 99 aa3.98□□□□□ -1.77
SEC22A-201ENST00000309934 CDK2AP2O75956 126 aa3.97□□□□□ -1.77
SEC22A-201ENST00000309934 LINC00528Q8N1L1 170 aa3.97□□□□□ -1.77
SEC22A-201ENST00000309934 IGLV5-52A0A0A0MRZ9 124 aa3.97□□□□□ -1.77
SEC22A-201ENST00000309934 IGLV6-57P01721 117 aa3.97□□□□□ -1.77
SEC22A-201ENST00000309934 LINC00337Q8N6G1 96 aa3.97□□□□□ -1.77
SEC22A-201ENST00000309934 HSPG2P98160 4391 aa3.97□□□□□ -1.77
SEC22A-201ENST00000309934 C15orf56Q8N910 161 aa3.97□□□□□ -1.77
SEC22A-201ENST00000309934 ELOF1P60002 83 aaKnown RBP3.96□□□□□ -1.78
SEC22A-201ENST00000309934 SMIM29Q86T20 159 aa3.96□□□□□ -1.78
SEC22A-201ENST00000309934 IGKV2-24A0A0C4DH68 120 aa3.96□□□□□ -1.78
SEC22A-201ENST00000309934 FLNCQ14315 2725 aa3.95□□□□□ -1.78
SEC22A-201ENST00000309934 COL12A1Q99715 3063 aa3.95□□□□□ -1.78
SEC22A-201ENST00000309934 TRBV7-4A0A0J9YYF1 115 aa3.95□□□□□ -1.78
SEC22A-201ENST00000309934 Q5VV11 94 aa3.95□□□□□ -1.78
SEC22A-201ENST00000309934 KCNQ1DNQ9H478 68 aa3.95□□□□□ -1.78
SEC22A-201ENST00000309934 EPM2AB3EWF7 344 aa3.94□□□□□ -1.78
SEC22A-201ENST00000309934 C22orf24Q9Y442 160 aa3.94□□□□□ -1.78
SEC22A-201ENST00000309934 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.94□□□□□ -1.78
SEC22A-201ENST00000309934 KRTAP16-1A8MUX0 517 aa3.94□□□□□ -1.78
SEC22A-201ENST00000309934 IGKV4-1P06312 121 aa3.94□□□□□ -1.78
SEC22A-201ENST00000309934 C9orf163Q8N9P6 203 aa3.94□□□□□ -1.78
SEC22A-201ENST00000309934 IGKV2-28A0A075B6P5 120 aa3.93□□□□□ -1.78
SEC22A-201ENST00000309934 IGKV2D-28P01615 120 aa3.93□□□□□ -1.78
SEC22A-201ENST00000309934 C10orf25Q5T742 122 aa3.93□□□□□ -1.78
SEC22A-201ENST00000309934 TNXBP22105 4242 aa3.93□□□□□ -1.78
SEC22A-201ENST00000309934 FAT2Q9NYQ8 4349 aa3.92□□□□□ -1.78
SEC22A-201ENST00000309934 DNAH11Q96DT5 4516 aa3.92□□□□□ -1.78
SEC22A-201ENST00000309934 RPL37AP61513 92 aaKnown RBP3.92□□□□□ -1.78
SEC22A-201ENST00000309934 PRR3P79522 188 aaKnown RBP3.92□□□□□ -1.78
SEC22A-201ENST00000309934 PCOTHQ58A44 107 aa3.92□□□□□ -1.78
SEC22A-201ENST00000309934 LINC00476Q8WZB0 136 aa3.92□□□□□ -1.78
SEC22A-201ENST00000309934 LINC00167Q96N53 147 aa3.92□□□□□ -1.78
SEC22A-201ENST00000309934 M0R2N4 97 aa3.92□□□□□ -1.78
SEC22A-201ENST00000309934 EIF4EBP3O60516 100 aaPredicted RBP3.92□□□□□ -1.78
SEC22A-201ENST00000309934 MOBPQ13875 183 aa3.92□□□□□ -1.78
SEC22A-201ENST00000309934 APCP25054 2843 aa3.92□□□□□ -1.78
SEC22A-201ENST00000309934 LOC110117498A0A087WWA1 95 aa3.92□□□□□ -1.78
SEC22A-201ENST00000309934 H0Y9P7 68 aa3.92□□□□□ -1.78
SEC22A-201ENST00000309934 MIR22HGQ0VDD5 57 aa3.92□□□□□ -1.78
SEC22A-201ENST00000309934 Q6ZRX8 168 aa3.92□□□□□ -1.78
SEC22A-201ENST00000309934 RTL8CO15255 209 aa3.91□□□□□ -1.78
SEC22A-201ENST00000309934 Q75L30 129 aa3.91□□□□□ -1.78
SEC22A-201ENST00000309934 IGLV1-50A0A075B6I6 118 aa3.91□□□□□ -1.78
SEC22A-201ENST00000309934 Q6ZQT0 140 aa3.91□□□□□ -1.78
SEC22A-201ENST00000309934 A0A087WTM6 91 aa3.9□□□□□ -1.78
SEC22A-201ENST00000309934 CSAG1Q6PB30 78 aa3.9□□□□□ -1.78
SEC22A-201ENST00000309934 A6NN06 94 aa3.9□□□□□ -1.78
SEC22A-201ENST00000309934 DEFB116Q30KQ4 102 aa3.9□□□□□ -1.78
SEC22A-201ENST00000309934 C9orf129Q5T035 196 aaKnown RBP3.9□□□□□ -1.78
SEC22A-201ENST00000309934 KRTAP26-1Q6PEX3 210 aa3.9□□□□□ -1.78
SEC22A-201ENST00000309934 COA5Q86WW8 74 aa3.9□□□□□ -1.78
SEC22A-201ENST00000309934 DNAH10Q8IVF4 4471 aa3.9□□□□□ -1.79
SEC22A-201ENST00000309934 A0A1B0GU69 56 aa3.9□□□□□ -1.79
SEC22A-201ENST00000309934 Q8N9P0 234 aaPredicted RBP3.9□□□□□ -1.79
SEC22A-201ENST00000309934 UTP20O75691 2785 aaKnown RBP3.89□□□□□ -1.79
SEC22A-201ENST00000309934 A8MU10 97 aa3.89□□□□□ -1.79
SEC22A-201ENST00000309934 TEX15Q9BXT5 2789 aa3.89□□□□□ -1.79
SEC22A-201ENST00000309934 TACC2O95359 2948 aa3.88□□□□□ -1.79
SEC22A-201ENST00000309934 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
SEC22A-201ENST00000309934 C1orf137Q5JT78 98 aa3.87□□□□□ -1.79
SEC22A-201ENST00000309934 SSBP3-AS1Q7Z2R9 100 aa3.87□□□□□ -1.79
SEC22A-201ENST00000309934 ITPR2Q14571 2701 aa3.86□□□□□ -1.79
SEC22A-201ENST00000309934 A0A096LNI7 61 aa3.86□□□□□ -1.79
SEC22A-201ENST00000309934 FBN3Q75N90 2809 aa3.86□□□□□ -1.79
SEC22A-201ENST00000309934 FAM229AH3BQW9 127 aa3.85□□□□□ -1.79
SEC22A-201ENST00000309934 CASC10Q5T4H9 136 aa3.85□□□□□ -1.79
SEC22A-201ENST00000309934 Q9BRP9 147 aa3.85□□□□□ -1.79
SEC22A-201ENST00000309934 LCE6AA0A183 80 aa3.84□□□□□ -1.79
SEC22A-201ENST00000309934 UQCR11O14957 56 aa3.84□□□□□ -1.79
SEC22A-201ENST00000309934 OCR1Q9BZK8 76 aa3.84□□□□□ -1.79
SEC22A-201ENST00000309934 PDZD2O15018 2839 aa3.84□□□□□ -1.79
SEC22A-201ENST00000309934 TENM4Q6N022 2769 aa3.84□□□□□ -1.79
SEC22A-201ENST00000309934 NSD1Q96L73 2696 aaPredicted RBP3.84□□□□□ -1.79
SEC22A-201ENST00000309934 SPRR1AP35321 89 aa3.84□□□□□ -1.79
SEC22A-201ENST00000309934 HIVEP1P15822 2718 aa3.84□□□□□ -1.8
SEC22A-201ENST00000309934 Q8NBF4 154 aa3.84□□□□□ -1.8
SEC22A-201ENST00000309934 OBSCN-AS1Q96MR7 158 aa3.84□□□□□ -1.8
SEC22A-201ENST00000309934 Q6ZR54 194 aa3.83□□□□□ -1.8
SEC22A-201ENST00000309934 H3BPC8 53 aa3.83□□□□□ -1.8
SEC22A-201ENST00000309934 SEC61BP60468 96 aaKnown RBP3.83□□□□□ -1.8
SEC22A-201ENST00000309934 CRYBG3Q68DQ2 2970 aa3.83□□□□□ -1.8
SEC22A-201ENST00000309934 FLG2Q5D862 2391 aaPredicted RBP3.82□□□□□ -1.8
SEC22A-201ENST00000309934 ADM2Q7Z4H4 148 aa3.82□□□□□ -1.8
SEC22A-201ENST00000309934 PLAC8Q9NZF1 115 aa3.82□□□□□ -1.8
SEC22A-201ENST00000309934 IGLV5-48A0A075B6I7 105 aa3.82□□□□□ -1.8
SEC22A-201ENST00000309934 SPACA4Q8TDM5 124 aa3.82□□□□□ -1.8
SEC22A-201ENST00000309934 CELSR2Q9HCU4 2923 aa3.81□□□□□ -1.8
SEC22A-201ENST00000309934 ZNF861PO60384 105 aa3.81□□□□□ -1.8
SEC22A-201ENST00000309934 SPINK7P58062 85 aa3.81□□□□□ -1.8
SEC22A-201ENST00000309934 IGLV8-61A0A075B6I0 122 aa3.8□□□□□ -1.8
SEC22A-201ENST00000309934 LRBAP50851 2863 aa3.8□□□□□ -1.8
SEC22A-201ENST00000309934 PLA2G1BP04054 148 aaKnown RBP3.8□□□□□ -1.8
SEC22A-201ENST00000309934 ST20-AS1Q8NBB2 130 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms