RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 Q8NAQ8 132 aa6.94□□□□□ -1.3
GGA2-201ENST00000309859 TP53AIP1Q9HCN2 124 aa6.94□□□□□ -1.3
GGA2-201ENST00000309859 CSAG1Q6PB30 78 aa6.93□□□□□ -1.3
GGA2-201ENST00000309859 LINC01556Q5JQF7 62 aa6.92□□□□□ -1.3
GGA2-201ENST00000309859 CNBPP62633 177 aaKnown RBP6.92□□□□□ -1.3
GGA2-201ENST00000309859 CRYBG3Q68DQ2 2970 aa6.91□□□□□ -1.3
GGA2-201ENST00000309859 BAHCC1Q9P281 2608 aa6.91□□□□□ -1.3
GGA2-201ENST00000309859 TEX15Q9BXT5 2789 aa6.91□□□□□ -1.3
GGA2-201ENST00000309859 K7ERS5 55 aa6.91□□□□□ -1.3
GGA2-201ENST00000309859 C9orf163Q8N9P6 203 aa6.91□□□□□ -1.3
GGA2-201ENST00000309859 J3QKU1 62 aa6.9□□□□□ -1.3
GGA2-201ENST00000309859 A6NN06 94 aa6.9□□□□□ -1.31
GGA2-201ENST00000309859 SSBP3-AS1Q7Z2R9 100 aa6.9□□□□□ -1.31
GGA2-201ENST00000309859 ANAPC11Q9NYG5 84 aa6.9□□□□□ -1.31
GGA2-201ENST00000309859 UQCR11O14957 56 aa6.89□□□□□ -1.31
GGA2-201ENST00000309859 HRNRQ86YZ3 2850 aaPredicted RBP6.89□□□□□ -1.31
GGA2-201ENST00000309859 C8orf17Q9NRJ1 99 aa6.88□□□□□ -1.31
GGA2-201ENST00000309859 IGLV7-46A0A075B6I9 117 aa6.88□□□□□ -1.31
GGA2-201ENST00000309859 SPRR4Q96PI1 79 aa6.88□□□□□ -1.31
GGA2-201ENST00000309859 SPINT4Q6UDR6 99 aa6.88□□□□□ -1.31
GGA2-201ENST00000309859 FBN2P35556 2912 aa6.88□□□□□ -1.31
GGA2-201ENST00000309859 HRES1P13985 223 aa6.88□□□□□ -1.31
GGA2-201ENST00000309859 ZCCHC13Q8WW36 166 aaKnown RBP6.88□□□□□ -1.31
GGA2-201ENST00000309859 FLNAP21333 2647 aaKnown RBP6.87□□□□□ -1.31
GGA2-201ENST00000309859 CRIPTQ9P021 101 aa6.87□□□□□ -1.31
GGA2-201ENST00000309859 MRPL34Q9BQ48 92 aaKnown RBP6.87□□□□□ -1.31
GGA2-201ENST00000309859 ZANQ9Y493 2812 aa6.87□□□□□ -1.31
GGA2-201ENST00000309859 LINC01558Q9Y6Z2 57 aa6.87□□□□□ -1.31
GGA2-201ENST00000309859 RTL8CO15255 209 aa6.84□□□□□ -1.31
GGA2-201ENST00000309859 C1orf134Q5TEV5 83 aa6.84□□□□□ -1.31
GGA2-201ENST00000309859 CSMD2Q7Z408 3487 aa6.84□□□□□ -1.32
GGA2-201ENST00000309859 APCP25054 2843 aa6.83□□□□□ -1.32
GGA2-201ENST00000309859 ZNF292O60281 2723 aa6.83□□□□□ -1.32
GGA2-201ENST00000309859 C14orf177Q52M58 125 aa6.81□□□□□ -1.32
GGA2-201ENST00000309859 ATRQ13535 2644 aa6.8□□□□□ -1.32
GGA2-201ENST00000309859 K7EIL1 84 aa6.8□□□□□ -1.32
GGA2-201ENST00000309859 UTP20O75691 2785 aaKnown RBP6.79□□□□□ -1.32
GGA2-201ENST00000309859 A0A1B0GVX0 72 aa6.79□□□□□ -1.32
GGA2-201ENST00000309859 ITPR3Q14573 2671 aa6.79□□□□□ -1.32
GGA2-201ENST00000309859 MMP24-AS1A0A0U1RRL7 71 aa6.78□□□□□ -1.32
GGA2-201ENST00000309859 KRTAP10-3P60369 221 aa6.77□□□□□ -1.33
GGA2-201ENST00000309859 CELSR2Q9HCU4 2923 aa6.76□□□□□ -1.33
GGA2-201ENST00000309859 CFAP46Q8IYW2 2715 aa6.76□□□□□ -1.33
GGA2-201ENST00000309859 ZFHX3Q15911 3703 aa6.76□□□□□ -1.33
GGA2-201ENST00000309859 HELZ2Q9BYK8 2649 aaKnown RBP6.74□□□□□ -1.33
GGA2-201ENST00000309859 SETXQ7Z333 2677 aaKnown RBP6.74□□□□□ -1.33
GGA2-201ENST00000309859 FASNP49327 2511 aaKnown RBP6.74□□□□□ -1.33
GGA2-201ENST00000309859 NOTCH1P46531 2555 aa6.74□□□□□ -1.33
GGA2-201ENST00000309859 NF1P21359 2839 aa6.74□□□□□ -1.33
GGA2-201ENST00000309859 SPACA4Q8TDM5 124 aa6.73□□□□□ -1.33
GGA2-201ENST00000309859 TNP2Q05952 138 aa6.72□□□□□ -1.33
GGA2-201ENST00000309859 Q8N1X5 172 aa6.72□□□□□ -1.33
GGA2-201ENST00000309859 LCE6AA0A183 80 aa6.72□□□□□ -1.33
GGA2-201ENST00000309859 HIVEP1P15822 2718 aa6.72□□□□□ -1.33
GGA2-201ENST00000309859 DNAH10OSP0CZ25 163 aa6.71□□□□□ -1.34
GGA2-201ENST00000309859 FLG2Q5D862 2391 aaPredicted RBP6.71□□□□□ -1.34
GGA2-201ENST00000309859 KRTAP29-1A8MX34 341 aaPredicted RBP6.7□□□□□ -1.34
GGA2-201ENST00000309859 LINC00472Q9H8W2 130 aa6.69□□□□□ -1.34
GGA2-201ENST00000309859 TLX1NBP0CAT3 122 aa6.69□□□□□ -1.34
GGA2-201ENST00000309859 UBR5O95071 2799 aaPredicted RBP6.68□□□□□ -1.34
GGA2-201ENST00000309859 PLA2G2DQ9UNK4 145 aa6.68□□□□□ -1.34
GGA2-201ENST00000309859 IGLV5-37A0A075B6J1 123 aa6.68□□□□□ -1.34
GGA2-201ENST00000309859 FLNCQ14315 2725 aa6.68□□□□□ -1.34
GGA2-201ENST00000309859 COL6A5A8TX70 2615 aa6.67□□□□□ -1.34
GGA2-201ENST00000309859 H3BNG1 76 aa6.66□□□□□ -1.34
GGA2-201ENST00000309859 SPRR1AP35321 89 aa6.66□□□□□ -1.34
GGA2-201ENST00000309859 DMBT1Q9UGM3 2413 aaPredicted RBP6.66□□□□□ -1.34
GGA2-201ENST00000309859 MGAM2Q2M2H8 2515 aa6.64□□□□□ -1.35
GGA2-201ENST00000309859 KRTAP26-1Q6PEX3 210 aa6.63□□□□□ -1.35
GGA2-201ENST00000309859 FAM229AH3BQW9 127 aa6.63□□□□□ -1.35
GGA2-201ENST00000309859 A0A087X002 238 aa6.63□□□□□ -1.35
GGA2-201ENST00000309859 NOTCH2NLQ7Z3S9 236 aa6.63□□□□□ -1.35
GGA2-201ENST00000309859 Q96NJ1 140 aa6.63□□□□□ -1.35
GGA2-201ENST00000309859 A0A0D9SG42 100 aa6.62□□□□□ -1.35
GGA2-201ENST00000309859 HECTD1Q9ULT8 2610 aa6.62□□□□□ -1.35
GGA2-201ENST00000309859 KRTAP4-16G5E9R7 235 aaPredicted RBP6.62□□□□□ -1.35
GGA2-201ENST00000309859 NIPBLQ6KC79 2804 aaeCLIP6.61□□□□□ -1.35
GGA2-201ENST00000309859 PLA2G1BP04054 148 aaKnown RBP6.61□□□□□ -1.35
GGA2-201ENST00000309859 Q6ZR54 194 aa6.61□□□□□ -1.35
GGA2-201ENST00000309859 KRTAP10-11P60412 298 aa6.61□□□□□ -1.35
GGA2-201ENST00000309859 NBEAL1Q6ZS30 2694 aa6.6□□□□□ -1.35
GGA2-201ENST00000309859 TEP1Q99973 2627 aaKnown RBP6.6□□□□□ -1.35
GGA2-201ENST00000309859 MXRA5Q9NR99 2828 aa6.6□□□□□ -1.35
GGA2-201ENST00000309859 IGLV5-52A0A0A0MRZ9 124 aa6.59□□□□□ -1.36
GGA2-201ENST00000309859 APLNQ9ULZ1 77 aa6.57□□□□□ -1.36
GGA2-201ENST00000309859 Q5W150 140 aa6.57□□□□□ -1.36
GGA2-201ENST00000309859 KRTAP7-1Q8IUC3 87 aa6.56□□□□□ -1.36
GGA2-201ENST00000309859 VPS13CQ709C8 3753 aa6.55□□□□□ -1.36
GGA2-201ENST00000309859 FLNBO75369 2602 aaKnown RBP6.55□□□□□ -1.36
GGA2-201ENST00000309859 KRTAP11-1Q8IUC1 163 aa6.53□□□□□ -1.36
GGA2-201ENST00000309859 PSORS1C2Q9UIG4 136 aa6.53□□□□□ -1.36
GGA2-201ENST00000309859 NSD1Q96L73 2696 aaPredicted RBP6.52□□□□□ -1.37
GGA2-201ENST00000309859 KRTAP1-3Q8IUG1 177 aa6.52□□□□□ -1.37
GGA2-201ENST00000309859 MAST4O15021 2626 aa6.51□□□□□ -1.37
GGA2-201ENST00000309859 LY6G6CO95867 125 aa6.5□□□□□ -1.37
GGA2-201ENST00000309859 SPATA8Q6RVD6 105 aa6.5□□□□□ -1.37
GGA2-201ENST00000309859 C9orf92A6NGG3 77 aa6.49□□□□□ -1.37
GGA2-201ENST00000309859 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.49□□□□□ -1.37
GGA2-201ENST00000309859 A0A1B0GU33 70 aa6.48□□□□□ -1.37
GGA2-201ENST00000309859 BSNQ9UPA5 3926 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms