RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 KRTAP11-1Q8IUC1 163 aa3.14□□□□□ -1.91
CAST-201ENST00000309190 SACSQ9NZJ4 4579 aa3.14□□□□□ -1.91
CAST-201ENST00000309190 NDUFC2O95298 119 aa3.14□□□□□ -1.91
CAST-201ENST00000309190 ZNF706Q9Y5V0 76 aaPredicted RBP3.14□□□□□ -1.91
CAST-201ENST00000309190 LOC107984640A0A0U1RRK4 108 aa3.13□□□□□ -1.91
CAST-201ENST00000309190 KRTAP26-1Q6PEX3 210 aa3.13□□□□□ -1.91
CAST-201ENST00000309190 DNAH2Q9P225 4427 aa3.13□□□□□ -1.91
CAST-201ENST00000309190 NDUFS5O43920 106 aa3.13□□□□□ -1.91
CAST-201ENST00000309190 SPINK6Q6UWN8 80 aa3.13□□□□□ -1.91
CAST-201ENST00000309190 CCKP06307 115 aa3.13□□□□□ -1.91
CAST-201ENST00000309190 Q6ZQY7 126 aa3.13□□□□□ -1.91
CAST-201ENST00000309190 COX6CP09669 75 aa3.13□□□□□ -1.91
CAST-201ENST00000309190 BCE1O60756 84 aa3.12□□□□□ -1.91
CAST-201ENST00000309190 BAALC-AS2P0C853 105 aa3.12□□□□□ -1.91
CAST-201ENST00000309190 LCE2CQ5TA81 110 aa3.12□□□□□ -1.91
CAST-201ENST00000309190 C9orf153Q5TBE3 101 aa3.12□□□□□ -1.91
CAST-201ENST00000309190 IGLV6-57P01721 117 aa3.12□□□□□ -1.91
CAST-201ENST00000309190 Q6ZQT0 140 aa3.12□□□□□ -1.91
CAST-201ENST00000309190 RBM12B-AS1Q9P1G2 102 aa3.12□□□□□ -1.91
CAST-201ENST00000309190 ERC2-IT1O76042 136 aa3.11□□□□□ -1.91
CAST-201ENST00000309190 Q6ZR54 194 aa3.11□□□□□ -1.91
CAST-201ENST00000309190 TRAV13-2A0A0B4J235 113 aa3.11□□□□□ -1.91
CAST-201ENST00000309190 H7BZZ5 65 aa3.11□□□□□ -1.91
CAST-201ENST00000309190 KLKP1Q107X0 134 aa3.11□□□□□ -1.91
CAST-201ENST00000309190 C9orf163Q8N9P6 203 aa3.11□□□□□ -1.91
CAST-201ENST00000309190 TRBV7-6A0A0J9YX20 115 aa3.11□□□□□ -1.91
CAST-201ENST00000309190 TRBV7-4A0A0J9YYF1 115 aa3.11□□□□□ -1.91
CAST-201ENST00000309190 FAT3Q8TDW7 4589 aa3.11□□□□□ -1.91
CAST-201ENST00000309190 HERC2O95714 4834 aa3.11□□□□□ -1.91
CAST-201ENST00000309190 TRAV23DV6A0A075B6W5 121 aa3.1□□□□□ -1.91
CAST-201ENST00000309190 Q6ZRN7 208 aaPredicted RBP3.1□□□□□ -1.91
CAST-201ENST00000309190 C8orf87E5RJ46 101 aa3.1□□□□□ -1.91
CAST-201ENST00000309190 LCE2BO14633 110 aa3.1□□□□□ -1.91
CAST-201ENST00000309190 ZNF73O43830 326 aaPredicted RBP3.1□□□□□ -1.91
CAST-201ENST00000309190 TMEM258P61165 79 aa3.1□□□□□ -1.91
CAST-201ENST00000309190 C14orf177Q52M58 125 aa3.1□□□□□ -1.91
CAST-201ENST00000309190 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.1□□□□□ -1.91
CAST-201ENST00000309190 SERP2Q8N6R1 65 aa3.1□□□□□ -1.91
CAST-201ENST00000309190 PSORS1C2Q9UIG4 136 aa3.1□□□□□ -1.91
CAST-201ENST00000309190 GVQW2A0A096LPI5 108 aaPredicted RBP3.1□□□□□ -1.91
CAST-201ENST00000309190 COX17Q14061 63 aa3.1□□□□□ -1.91
CAST-201ENST00000309190 A0A087WVE0 104 aa3.1□□□□□ -1.91
CAST-201ENST00000309190 ATOX1O00244 68 aa3.1□□□□□ -1.91
CAST-201ENST00000309190 RETNLBQ9BQ08 111 aa3.1□□□□□ -1.91
CAST-201ENST00000309190 H0YGX0 51 aa3.09□□□□□ -1.91
CAST-201ENST00000309190 DIRC1Q969H9 104 aa3.09□□□□□ -1.91
CAST-201ENST00000309190 MYCBP2O75592 4640 aa3.09□□□□□ -1.91
CAST-201ENST00000309190 C14orf132Q9NPU4 83 aa3.09□□□□□ -1.91
CAST-201ENST00000309190 ATP5EP2Q5VTU8 51 aa3.09□□□□□ -1.92
CAST-201ENST00000309190 FP248Q71RG6 208 aaPredicted RBP3.09□□□□□ -1.92
CAST-201ENST00000309190 LINC01547P58512 204 aaPredicted RBP3.08□□□□□ -1.92
CAST-201ENST00000309190 KRTAP23-1A1A580 65 aa3.08□□□□□ -1.92
CAST-201ENST00000309190 COX7BP24311 80 aa3.08□□□□□ -1.92
CAST-201ENST00000309190 LINC00575Q6W349 94 aa3.08□□□□□ -1.92
CAST-201ENST00000309190 COPS9Q8WXC6 57 aa3.08□□□□□ -1.92
CAST-201ENST00000309190 PKD1P98161 4303 aa3.08□□□□□ -1.92
CAST-201ENST00000309190 KRTAP4-16G5E9R7 235 aaPredicted RBP3.07□□□□□ -1.92
CAST-201ENST00000309190 KRTAP7-1Q8IUC3 87 aa3.07□□□□□ -1.92
CAST-201ENST00000309190 M0R378 163 aa3.07□□□□□ -1.92
CAST-201ENST00000309190 DNAH5Q8TE73 4624 aa3.07□□□□□ -1.92
CAST-201ENST00000309190 hADV29S1A0JD25 119 aa3.07□□□□□ -1.92
CAST-201ENST00000309190 J3KT08 172 aa3.07□□□□□ -1.92
CAST-201ENST00000309190 IGLV5-37A0A075B6J1 123 aa3.06□□□□□ -1.92
CAST-201ENST00000309190 CXCL6P80162 114 aa3.06□□□□□ -1.92
CAST-201ENST00000309190 MOBPQ13875 183 aa3.06□□□□□ -1.92
CAST-201ENST00000309190 ZCCHC13Q8WW36 166 aaKnown RBP3.05□□□□□ -1.92
CAST-201ENST00000309190 SPACA4Q8TDM5 124 aa3.05□□□□□ -1.92
CAST-201ENST00000309190 BRK1Q8WUW1 75 aa3.05□□□□□ -1.92
CAST-201ENST00000309190 KRTAP4-5Q9BYR2 181 aa3.05□□□□□ -1.92
CAST-201ENST00000309190 UBR4Q5T4S7 5183 aa3.05□□□□□ -1.92
CAST-201ENST00000309190 OCR1Q9BZK8 76 aa3.05□□□□□ -1.92
CAST-201ENST00000309190 RPL37AP61513 92 aaKnown RBP3.04□□□□□ -1.92
CAST-201ENST00000309190 ORMDL1Q9P0S3 153 aa3.04□□□□□ -1.92
CAST-201ENST00000309190 F8WEM9 126 aa3.04□□□□□ -1.92
CAST-201ENST00000309190 ELOF1P60002 83 aaKnown RBP3.04□□□□□ -1.92
CAST-201ENST00000309190 LCE2AQ5TA79 106 aaPredicted RBP3.04□□□□□ -1.92
CAST-201ENST00000309190 LRP1Q07954 4544 aaKnown RBP3.04□□□□□ -1.92
CAST-201ENST00000309190 VPS13BQ7Z7G8 4022 aa3.04□□□□□ -1.92
CAST-201ENST00000309190 JMJD7-PLA2G4BH0Y9G9 81 aa3.04□□□□□ -1.92
CAST-201ENST00000309190 Q8N9L7 120 aa3.04□□□□□ -1.92
CAST-201ENST00000309190 LRP1BQ9NZR2 4599 aa3.03□□□□□ -1.92
CAST-201ENST00000309190 H0Y9J4 135 aa3.03□□□□□ -1.92
CAST-201ENST00000309190 Q5VSD8 79 aa3.03□□□□□ -1.92
CAST-201ENST00000309190 DHRS4-AS1Q9P1J3 65 aa3.03□□□□□ -1.92
CAST-201ENST00000309190 TMEM256-PLSCR3K7ERE1 68 aa3.03□□□□□ -1.92
CAST-201ENST00000309190 MP68P56378 58 aa3.03□□□□□ -1.92
CAST-201ENST00000309190 IGKV3D-7A0A0C4DH55 119 aa3.03□□□□□ -1.92
CAST-201ENST00000309190 Q9BRP9 147 aa3.03□□□□□ -1.92
CAST-201ENST00000309190 IGLV1-50A0A075B6I6 118 aa3.02□□□□□ -1.93
CAST-201ENST00000309190 IGLV5-48A0A075B6I7 105 aa3.02□□□□□ -1.93
CAST-201ENST00000309190 IGKV4-1P06312 121 aa3.02□□□□□ -1.93
CAST-201ENST00000309190 DSCR8Q96T75 97 aa3.02□□□□□ -1.93
CAST-201ENST00000309190 SPRR1AP35321 89 aa3.02□□□□□ -1.93
CAST-201ENST00000309190 TRAV7A0A075B6U4 112 aa3.02□□□□□ -1.93
CAST-201ENST00000309190 CNBPP62633 177 aaKnown RBP3.02□□□□□ -1.93
CAST-201ENST00000309190 FAM229BQ4G0N7 80 aa3.02□□□□□ -1.93
CAST-201ENST00000309190 FAT2Q9NYQ8 4349 aa3.01□□□□□ -1.93
CAST-201ENST00000309190 HERC1Q15751 4861 aa3.01□□□□□ -1.93
CAST-201ENST00000309190 ABCA13Q86UQ4 5058 aa3.01□□□□□ -1.93
CAST-201ENST00000309190 LINC00474Q9P2X8 69 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms