RNA–Protein interactions for RNA: ENST00000308664.10

ATP2A2-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-201ENST00000308664 C16orf90A8MZG2 172 aa11.9□□□□□ -0.51
ATP2A2-201ENST00000308664 IGKV2-30P06310 120 aa11.9□□□□□ -0.51
ATP2A2-201ENST00000308664 IGFL1Q6UW32 110 aa11.89□□□□□ -0.51
ATP2A2-201ENST00000308664 A0A1W2PNM2 257 aa11.89□□□□□ -0.51
ATP2A2-201ENST00000308664 A0A1B0GU69 56 aa11.88□□□□□ -0.51
ATP2A2-201ENST00000308664 COA5Q86WW8 74 aa11.88□□□□□ -0.51
ATP2A2-201ENST00000308664 LAMA5O15230 3695 aa11.87□□□□□ -0.51
ATP2A2-201ENST00000308664 A8MWP4 228 aa11.86□□□□□ -0.51
ATP2A2-201ENST00000308664 DCHS2Q6V1P9 2916 aa11.84□□□□□ -0.51
ATP2A2-201ENST00000308664 CASC10Q5T4H9 136 aa11.84□□□□□ -0.51
ATP2A2-201ENST00000308664 FLG2Q5D862 2391 aaPredicted RBP11.84□□□□□ -0.51
ATP2A2-201ENST00000308664 ACYP2P14621 99 aa11.84□□□□□ -0.51
ATP2A2-201ENST00000308664 NF1P21359 2839 aa11.83□□□□□ -0.52
ATP2A2-201ENST00000308664 Q5XG85 94 aa11.83□□□□□ -0.52
ATP2A2-201ENST00000308664 WIPF1O43516 503 aa11.82□□□□□ -0.52
ATP2A2-201ENST00000308664 OCR1Q9BZK8 76 aa11.82□□□□□ -0.52
ATP2A2-201ENST00000308664 DCHS1Q96JQ0 3298 aa11.82□□□□□ -0.52
ATP2A2-201ENST00000308664 NIPBLQ6KC79 2804 aaeCLIP11.81□□□□□ -0.52
ATP2A2-201ENST00000308664 PRR15Q8IV56 129 aa11.81□□□□□ -0.52
ATP2A2-201ENST00000308664 Q8NDZ9 215 aa11.79□□□□□ -0.52
ATP2A2-201ENST00000308664 CYP4F30PQ9H0H9 118 aa11.78□□□□□ -0.52
ATP2A2-201ENST00000308664 APCP25054 2843 aa11.78□□□□□ -0.52
ATP2A2-201ENST00000308664 IGLV8-61A0A075B6I0 122 aa11.77□□□□□ -0.52
ATP2A2-201ENST00000308664 ATP11AUNQ6ZP68 121 aa11.77□□□□□ -0.52
ATP2A2-201ENST00000308664 LOC101927531A0A1B0GV80 90 aa11.75□□□□□ -0.53
ATP2A2-201ENST00000308664 OXTP01178 125 aa11.75□□□□□ -0.53
ATP2A2-201ENST00000308664 FP248Q71RG6 208 aaPredicted RBP11.74□□□□□ -0.53
ATP2A2-201ENST00000308664 IGLV5-48A0A075B6I7 105 aa11.74□□□□□ -0.53
ATP2A2-201ENST00000308664 SMR3BP02814 79 aaPredicted RBP11.73□□□□□ -0.53
ATP2A2-201ENST00000308664 C7orf65Q6ZTY9 151 aa11.72□□□□□ -0.53
ATP2A2-201ENST00000308664 TYMSOSQ8TAI1 123 aa11.71□□□□□ -0.54
ATP2A2-201ENST00000308664 MRPL34Q9BQ48 92 aaKnown RBP11.7□□□□□ -0.54
ATP2A2-201ENST00000308664 ANAPC11Q9NYG5 84 aa11.7□□□□□ -0.54
ATP2A2-201ENST00000308664 FAM229AH3BQW9 127 aa11.69□□□□□ -0.54
ATP2A2-201ENST00000308664 FAM229BQ4G0N7 80 aa11.69□□□□□ -0.54
ATP2A2-201ENST00000308664 A0A087WTM6 91 aa11.68□□□□□ -0.54
ATP2A2-201ENST00000308664 FBN2P35556 2912 aa11.68□□□□□ -0.54
ATP2A2-201ENST00000308664 PLA2G1BP04054 148 aaKnown RBP11.67□□□□□ -0.54
ATP2A2-201ENST00000308664 DSCR10P59022 87 aa11.66□□□□□ -0.54
ATP2A2-201ENST00000308664 CD164Q04900 197 aa11.66□□□□□ -0.54
ATP2A2-201ENST00000308664 C8orf17Q9NRJ1 99 aa11.66□□□□□ -0.54
ATP2A2-201ENST00000308664 ZFHX4Q86UP3 3567 aa11.66□□□□□ -0.54
ATP2A2-201ENST00000308664 C9orf163Q8N9P6 203 aa11.65□□□□□ -0.54
ATP2A2-201ENST00000308664 C8orf87E5RJ46 101 aa11.65□□□□□ -0.54
ATP2A2-201ENST00000308664 TLX1NBP0CAT3 122 aa11.65□□□□□ -0.54
ATP2A2-201ENST00000308664 LINC00313P59037 77 aa11.63□□□□□ -0.55
ATP2A2-201ENST00000308664 APLNQ9ULZ1 77 aa11.62□□□□□ -0.55
ATP2A2-201ENST00000308664 PLA2G2DQ9UNK4 145 aa11.62□□□□□ -0.55
ATP2A2-201ENST00000308664 KTN1-AS1Q86SY8 53 aa11.6□□□□□ -0.55
ATP2A2-201ENST00000308664 Q1T7F1 81 aa11.59□□□□□ -0.55
ATP2A2-201ENST00000308664 SPANXA2-OT1Q8N9U9 137 aa11.57□□□□□ -0.56
ATP2A2-201ENST00000308664 A0A1B0GVX0 72 aa11.56□□□□□ -0.56
ATP2A2-201ENST00000308664 SPRR4Q96PI1 79 aa11.55□□□□□ -0.56
ATP2A2-201ENST00000308664 RELNP78509 3460 aa11.53□□□□□ -0.56
ATP2A2-201ENST00000308664 UQCR11O14957 56 aa11.53□□□□□ -0.56
ATP2A2-201ENST00000308664 PSORS1C2Q9UIG4 136 aa11.52□□□□□ -0.57
ATP2A2-201ENST00000308664 ZNF861PO60384 105 aa11.51□□□□□ -0.57
ATP2A2-201ENST00000308664 PRR26Q8N8Z3 221 aa11.51□□□□□ -0.57
ATP2A2-201ENST00000308664 TNP2Q05952 138 aa11.5□□□□□ -0.57
ATP2A2-201ENST00000308664 Q96NJ1 140 aa11.49□□□□□ -0.57
ATP2A2-201ENST00000308664 CDC42SE1Q9NRR8 79 aa11.46□□□□□ -0.57
ATP2A2-201ENST00000308664 MIR22HGQ0VDD5 57 aa11.45□□□□□ -0.58
ATP2A2-201ENST00000308664 IGLV5-37A0A075B6J1 123 aa11.45□□□□□ -0.58
ATP2A2-201ENST00000308664 LCA10Q71F78 164 aa11.43□□□□□ -0.58
ATP2A2-201ENST00000308664 Q8N9P0 234 aaPredicted RBP11.42□□□□□ -0.58
ATP2A2-201ENST00000308664 TENM3Q9P273 2699 aa11.42□□□□□ -0.58
ATP2A2-201ENST00000308664 CNBPP62633 177 aaKnown RBP11.4□□□□□ -0.58
ATP2A2-201ENST00000308664 J3QL48 77 aa11.39□□□□□ -0.59
ATP2A2-201ENST00000308664 HRNRQ86YZ3 2850 aaPredicted RBP11.38□□□□□ -0.59
ATP2A2-201ENST00000308664 IGLV7-43P04211 117 aa11.38□□□□□ -0.59
ATP2A2-201ENST00000308664 C9orf92A6NGG3 77 aa11.37□□□□□ -0.59
ATP2A2-201ENST00000308664 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.37□□□□□ -0.59
ATP2A2-201ENST00000308664 IGLV7-46A0A075B6I9 117 aa11.36□□□□□ -0.59
ATP2A2-201ENST00000308664 LINC00304Q8N9R0 145 aa11.34□□□□□ -0.59
ATP2A2-201ENST00000308664 SPRR1AP35321 89 aa11.34□□□□□ -0.59
ATP2A2-201ENST00000308664 RBM12B-AS1Q9P1G2 102 aa11.34□□□□□ -0.59
ATP2A2-201ENST00000308664 SSBP3-AS1Q7Z2R9 100 aa11.33□□□□□ -0.6
ATP2A2-201ENST00000308664 Q5VV11 94 aa11.33□□□□□ -0.6
ATP2A2-201ENST00000308664 PKD1L1Q8TDX9 2849 aa11.31□□□□□ -0.6
ATP2A2-201ENST00000308664 Q75L30 129 aa11.29□□□□□ -0.6
ATP2A2-201ENST00000308664 SMG1Q96Q15 3661 aaKnown RBP11.29□□□□□ -0.6
ATP2A2-201ENST00000308664 KRTAP1-5Q9BYS1 174 aa11.28□□□□□ -0.6
ATP2A2-201ENST00000308664 MMP24-AS1A0A0U1RRL7 71 aa11.28□□□□□ -0.6
ATP2A2-201ENST00000308664 MXRA5Q9NR99 2828 aa11.26□□□□□ -0.61
ATP2A2-201ENST00000308664 KRTAP26-1Q6PEX3 210 aa11.23□□□□□ -0.61
ATP2A2-201ENST00000308664 SPINT4Q6UDR6 99 aa11.22□□□□□ -0.61
ATP2A2-201ENST00000308664 Q8N1X5 172 aa11.21□□□□□ -0.61
ATP2A2-201ENST00000308664 LINC01558Q9Y6Z2 57 aa11.21□□□□□ -0.62
ATP2A2-201ENST00000308664 LINC00472Q9H8W2 130 aa11.2□□□□□ -0.62
ATP2A2-201ENST00000308664 PRAC1Q96KF2 57 aa11.2□□□□□ -0.62
ATP2A2-201ENST00000308664 TENM1Q9UKZ4 2725 aa11.19□□□□□ -0.62
ATP2A2-201ENST00000308664 HRES1P13985 223 aa11.17□□□□□ -0.62
ATP2A2-201ENST00000308664 SPINK7P58062 85 aa11.17□□□□□ -0.62
ATP2A2-201ENST00000308664 CELSR1Q9NYQ6 3014 aa11.12□□□□□ -0.63
ATP2A2-201ENST00000308664 COX6B2Q6YFQ2 88 aa11.1□□□□□ -0.63
ATP2A2-201ENST00000308664 ZCCHC13Q8WW36 166 aaKnown RBP11.08□□□□□ -0.64
ATP2A2-201ENST00000308664 KRTAP4-16G5E9R7 235 aaPredicted RBP11.07□□□□□ -0.64
ATP2A2-201ENST00000308664 SPRR1BP22528 89 aa11.06□□□□□ -0.64
ATP2A2-201ENST00000308664 SVEP1Q4LDE5 3571 aa11.06□□□□□ -0.64
ATP2A2-201ENST00000308664 SPENQ96T58 3664 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms