RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 KRTAP11-1Q8IUC1 163 aa15.38■□□□□ 0.05
SPTSSA-201ENST00000298130 IGFL1Q6UW32 110 aa15.37■□□□□ 0.05
SPTSSA-201ENST00000298130 DNAH7Q8WXX0 4024 aa15.35■□□□□ 0.05
SPTSSA-201ENST00000298130 PHF5AQ7RTV0 110 aaKnown RBP15.34■□□□□ 0.05
SPTSSA-201ENST00000298130 A0A087WSZ3 146 aa15.33■□□□□ 0.04
SPTSSA-201ENST00000298130 RPL37AP61513 92 aaKnown RBP15.32■□□□□ 0.04
SPTSSA-201ENST00000298130 WFDC13Q8IUB5 93 aa15.3■□□□□ 0.04
SPTSSA-201ENST00000298130 MPLKIPQ8TAP9 179 aa15.3■□□□□ 0.04
SPTSSA-201ENST00000298130 C16orf90A8MZG2 172 aa15.3■□□□□ 0.04
SPTSSA-201ENST00000298130 SMIM26A0A096LP01 95 aa15.29■□□□□ 0.04
SPTSSA-201ENST00000298130 UBE2DNLQ8IWF7 75 aa15.29■□□□□ 0.04
SPTSSA-201ENST00000298130 LRCOL1A6NCL2 159 aa15.26■□□□□ 0.03
SPTSSA-201ENST00000298130 LINC00336Q6ZUF6 198 aa15.26■□□□□ 0.03
SPTSSA-201ENST00000298130 PRR4Q16378 134 aa15.26■□□□□ 0.03
SPTSSA-201ENST00000298130 A0A1B0GW54 56 aa15.25■□□□□ 0.03
SPTSSA-201ENST00000298130 UBE2AP49459 152 aa15.24■□□□□ 0.03
SPTSSA-201ENST00000298130 HCG22E2RYF7 251 aa15.23■□□□□ 0.03
SPTSSA-201ENST00000298130 ATP5EP56381 51 aaPredicted RBP15.2■□□□□ 0.02
SPTSSA-201ENST00000298130 CNBPP62633 177 aaKnown RBP15.19■□□□□ 0.02
SPTSSA-201ENST00000298130 PANO1I0J062 215 aa15.17■□□□□ 0.02
SPTSSA-201ENST00000298130 PLECQ15149 4684 aaKnown RBP15.14■□□□□ 0.01
SPTSSA-201ENST00000298130 LCE6AA0A183 80 aa15.13■□□□□ 0.01
SPTSSA-201ENST00000298130 APLNQ9ULZ1 77 aa15.13■□□□□ 0.01
SPTSSA-201ENST00000298130 ZCCHC13Q8WW36 166 aaKnown RBP15.09■□□□□ 0.01
SPTSSA-201ENST00000298130 IGLV8-61A0A075B6I0 122 aa15.07■□□□□ 0
SPTSSA-201ENST00000298130 C1orf64Q8NEQ6 169 aa15.06■□□□□ 0
SPTSSA-201ENST00000298130 LINC00208Q96KT6 92 aa15.02■□□□□ -0
SPTSSA-201ENST00000298130 C9orf163Q8N9P6 203 aa15.02□□□□□ -0.01
SPTSSA-201ENST00000298130 BRK1Q8WUW1 75 aa15.02□□□□□ -0.01
SPTSSA-201ENST00000298130 hDV103S1A0JD37 113 aa15.01□□□□□ -0.01
SPTSSA-201ENST00000298130 CASC2Q6XLA1 102 aa14.98□□□□□ -0.01
SPTSSA-201ENST00000298130 IGLV9-49A0A0B4J1Y8 123 aa14.98□□□□□ -0.01
SPTSSA-201ENST00000298130 C14orf177Q52M58 125 aa14.97□□□□□ -0.01
SPTSSA-201ENST00000298130 H0Y9J4 135 aa14.97□□□□□ -0.01
SPTSSA-201ENST00000298130 KRTAP29-1A8MX34 341 aaPredicted RBP14.96□□□□□ -0.01
SPTSSA-201ENST00000298130 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.96□□□□□ -0.02
SPTSSA-201ENST00000298130 MDFIQ99750 246 aa14.95□□□□□ -0.02
SPTSSA-201ENST00000298130 B9D2Q9BPU9 175 aa14.95□□□□□ -0.02
SPTSSA-201ENST00000298130 NBDYA0A0U1RRE5 68 aa14.95□□□□□ -0.02
SPTSSA-201ENST00000298130 PRR15Q8IV56 129 aa14.95□□□□□ -0.02
SPTSSA-201ENST00000298130 LINC00472Q9H8W2 130 aa14.95□□□□□ -0.02
SPTSSA-201ENST00000298130 PRO0628Q9UI54 55 aa14.94□□□□□ -0.02
SPTSSA-201ENST00000298130 MP68P56378 58 aa14.93□□□□□ -0.02
SPTSSA-201ENST00000298130 SPRR1BP22528 89 aa14.92□□□□□ -0.02
SPTSSA-201ENST00000298130 H0Y9P7 68 aa14.9□□□□□ -0.02
SPTSSA-201ENST00000298130 STARD9Q9P2P6 4700 aa14.9□□□□□ -0.02
SPTSSA-201ENST00000298130 A8MWP4 228 aa14.9□□□□□ -0.02
SPTSSA-201ENST00000298130 FRAS1Q86XX4 4008 aa14.89□□□□□ -0.03
SPTSSA-201ENST00000298130 ANAPC11Q9NYG5 84 aa14.89□□□□□ -0.03
SPTSSA-201ENST00000298130 TRAV22A0A0B4J277 110 aa14.88□□□□□ -0.03
SPTSSA-201ENST00000298130 PKIGQ9Y2B9 76 aa14.88□□□□□ -0.03
SPTSSA-201ENST00000298130 Q6ZRN7 208 aaPredicted RBP14.87□□□□□ -0.03
SPTSSA-201ENST00000298130 DYNC2H1Q8NCM8 4307 aaKnown RBP14.86□□□□□ -0.03
SPTSSA-201ENST00000298130 PSPHP1O15172 72 aa14.85□□□□□ -0.03
SPTSSA-201ENST00000298130 KRTAP13-1Q8IUC0 172 aa14.84□□□□□ -0.03
SPTSSA-201ENST00000298130 KMT2AQ03164 3969 aa14.8□□□□□ -0.04
SPTSSA-201ENST00000298130 MMP24-AS1A0A0U1RRL7 71 aa14.79□□□□□ -0.04
SPTSSA-201ENST00000298130 NDUFB1O75438 58 aa14.77□□□□□ -0.04
SPTSSA-201ENST00000298130 SPACA4Q8TDM5 124 aa14.77□□□□□ -0.04
SPTSSA-201ENST00000298130 CYP4F30PQ9H0H9 118 aa14.77□□□□□ -0.04
SPTSSA-201ENST00000298130 MOBPQ13875 183 aa14.74□□□□□ -0.05
SPTSSA-201ENST00000298130 TGP01266 2768 aa14.74□□□□□ -0.05
SPTSSA-201ENST00000298130 Q96NJ1 140 aa14.73□□□□□ -0.05
SPTSSA-201ENST00000298130 HECTD4Q9Y4D8 3996 aa14.72□□□□□ -0.05
SPTSSA-201ENST00000298130 PRKDCP78527 4128 aaKnown RBP14.72□□□□□ -0.05
SPTSSA-201ENST00000298130 PCOTHQ58A44 107 aa14.71□□□□□ -0.06
SPTSSA-201ENST00000298130 DNAH8Q96JB1 4490 aa14.7□□□□□ -0.06
SPTSSA-201ENST00000298130 A0A087WTM6 91 aa14.7□□□□□ -0.06
SPTSSA-201ENST00000298130 PSORS1C2Q9UIG4 136 aa14.7□□□□□ -0.06
SPTSSA-201ENST00000298130 NUPR2A6NF83 97 aa14.69□□□□□ -0.06
SPTSSA-201ENST00000298130 IGHV6-1A0A0B4J1U7 121 aa14.69□□□□□ -0.06
SPTSSA-201ENST00000298130 Q1T7F1 81 aa14.69□□□□□ -0.06
SPTSSA-201ENST00000298130 DNAH2Q9P225 4427 aa14.68□□□□□ -0.06
SPTSSA-201ENST00000298130 VPS13DQ5THJ4 4388 aa14.66□□□□□ -0.06
SPTSSA-201ENST00000298130 A8MUN3 132 aa14.66□□□□□ -0.06
SPTSSA-201ENST00000298130 NDUFS5O43920 106 aa14.66□□□□□ -0.06
SPTSSA-201ENST00000298130 RTL8CO15255 209 aa14.65□□□□□ -0.06
SPTSSA-201ENST00000298130 A0A087X002 238 aa14.63□□□□□ -0.07
SPTSSA-201ENST00000298130 NOTCH2NLQ7Z3S9 236 aa14.63□□□□□ -0.07
SPTSSA-201ENST00000298130 WWC2-AS2Q96NR7 200 aa14.62□□□□□ -0.07
SPTSSA-201ENST00000298130 C8orf17Q9NRJ1 99 aa14.6□□□□□ -0.07
SPTSSA-201ENST00000298130 DNAH17Q9UFH2 4485 aa14.6□□□□□ -0.07
SPTSSA-201ENST00000298130 IGLV5-52A0A0A0MRZ9 124 aa14.58□□□□□ -0.08
SPTSSA-201ENST00000298130 A8MU10 97 aa14.58□□□□□ -0.08
SPTSSA-201ENST00000298130 SPINK6Q6UWN8 80 aa14.58□□□□□ -0.08
SPTSSA-201ENST00000298130 MEGF8Q7Z7M0 2845 aa14.57□□□□□ -0.08
SPTSSA-201ENST00000298130 LINC00483Q53H64 154 aa14.56□□□□□ -0.08
SPTSSA-201ENST00000298130 H3BPC8 53 aa14.56□□□□□ -0.08
SPTSSA-201ENST00000298130 SPANXA2-OT1Q8N9U9 137 aa14.55□□□□□ -0.08
SPTSSA-201ENST00000298130 FBN3Q75N90 2809 aa14.55□□□□□ -0.08
SPTSSA-201ENST00000298130 CD164Q04900 197 aa14.53□□□□□ -0.08
SPTSSA-201ENST00000298130 A0A1B0GVX0 72 aa14.51□□□□□ -0.09
SPTSSA-201ENST00000298130 ZNF861PO60384 105 aa14.51□□□□□ -0.09
SPTSSA-201ENST00000298130 CDK2AP2O75956 126 aa14.51□□□□□ -0.09
SPTSSA-201ENST00000298130 COA5Q86WW8 74 aa14.49□□□□□ -0.09
SPTSSA-201ENST00000298130 Q8N9P0 234 aaPredicted RBP14.48□□□□□ -0.09
SPTSSA-201ENST00000298130 ASB16-AS1Q495Z4 193 aa14.48□□□□□ -0.09
SPTSSA-201ENST00000298130 ZNF706Q9Y5V0 76 aaPredicted RBP14.47□□□□□ -0.09
SPTSSA-201ENST00000298130 DNAH6Q9C0G6 4158 aa14.47□□□□□ -0.09
SPTSSA-201ENST00000298130 Q5VV11 94 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms