RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 CAMK2N1Q7Z7J9 78 aa11.72□□□□□ -0.53
LSM11-201ENST00000286307 ZCCHC13Q8WW36 166 aaKnown RBP11.7□□□□□ -0.54
LSM11-201ENST00000286307 COL6A5A8TX70 2615 aa11.69□□□□□ -0.54
LSM11-201ENST00000286307 DSPP15924 2871 aaKnown RBP11.68□□□□□ -0.54
LSM11-201ENST00000286307 S4R3F8 94 aa11.68□□□□□ -0.54
LSM11-201ENST00000286307 UNC80Q8N2C7 3258 aa11.68□□□□□ -0.54
LSM11-201ENST00000286307 IGSF10Q6WRI0 2623 aa11.66□□□□□ -0.54
LSM11-201ENST00000286307 LAMA2P24043 3122 aaKnown RBP11.66□□□□□ -0.54
LSM11-201ENST00000286307 OXTP01178 125 aa11.65□□□□□ -0.54
LSM11-201ENST00000286307 Q8NDZ9 215 aa11.65□□□□□ -0.54
LSM11-201ENST00000286307 CSAG1Q6PB30 78 aa11.64□□□□□ -0.55
LSM11-201ENST00000286307 CHD6Q8TD26 2715 aa11.63□□□□□ -0.55
LSM11-201ENST00000286307 Q6ZR54 194 aa11.63□□□□□ -0.55
LSM11-201ENST00000286307 SPRR1AP35321 89 aa11.6□□□□□ -0.55
LSM11-201ENST00000286307 TRIOO75962 3097 aa11.59□□□□□ -0.55
LSM11-201ENST00000286307 KRTAP26-1Q6PEX3 210 aa11.58□□□□□ -0.55
LSM11-201ENST00000286307 KRTAP21-3Q3LHN1 58 aa11.58□□□□□ -0.56
LSM11-201ENST00000286307 CYP4F30PQ9H0H9 118 aa11.58□□□□□ -0.56
LSM11-201ENST00000286307 HRES1P13985 223 aa11.57□□□□□ -0.56
LSM11-201ENST00000286307 PANO1I0J062 215 aa11.57□□□□□ -0.56
LSM11-201ENST00000286307 RPS28P62857 69 aaKnown RBP11.56□□□□□ -0.56
LSM11-201ENST00000286307 KLKP1Q107X0 134 aa11.56□□□□□ -0.56
LSM11-201ENST00000286307 SPINK7P58062 85 aa11.55□□□□□ -0.56
LSM11-201ENST00000286307 UNC79Q9P2D8 2635 aa11.54□□□□□ -0.56
LSM11-201ENST00000286307 PRO0628Q9UI54 55 aa11.54□□□□□ -0.56
LSM11-201ENST00000286307 CDC42SE1Q9NRR8 79 aa11.53□□□□□ -0.56
LSM11-201ENST00000286307 SPANXA2-OT1Q8N9U9 137 aa11.5□□□□□ -0.57
LSM11-201ENST00000286307 MMP24-AS1A0A0U1RRL7 71 aa11.49□□□□□ -0.57
LSM11-201ENST00000286307 Q8N9P0 234 aaPredicted RBP11.47□□□□□ -0.57
LSM11-201ENST00000286307 SPRR1BP22528 89 aa11.46□□□□□ -0.57
LSM11-201ENST00000286307 SZT2Q5T011 3432 aa11.46□□□□□ -0.57
LSM11-201ENST00000286307 FP248Q71RG6 208 aaPredicted RBP11.45□□□□□ -0.58
LSM11-201ENST00000286307 H7BZZ5 65 aa11.45□□□□□ -0.58
LSM11-201ENST00000286307 GCN1Q92616 2671 aaKnown RBP11.44□□□□□ -0.58
LSM11-201ENST00000286307 CELSR3Q9NYQ7 3312 aa11.44□□□□□ -0.58
LSM11-201ENST00000286307 Q5W150 140 aa11.42□□□□□ -0.58
LSM11-201ENST00000286307 A0A1B0GU33 70 aa11.41□□□□□ -0.58
LSM11-201ENST00000286307 R4GN34 69 aa11.41□□□□□ -0.58
LSM11-201ENST00000286307 ITPR2Q14571 2701 aa11.4□□□□□ -0.58
LSM11-201ENST00000286307 OCR1Q9BZK8 76 aa11.39□□□□□ -0.59
LSM11-201ENST00000286307 FRYQ5TBA9 3013 aa11.39□□□□□ -0.59
LSM11-201ENST00000286307 A0A087X002 238 aa11.39□□□□□ -0.59
LSM11-201ENST00000286307 VPS13AQ96RL7 3174 aa11.38□□□□□ -0.59
LSM11-201ENST00000286307 LINC00472Q9H8W2 130 aa11.37□□□□□ -0.59
LSM11-201ENST00000286307 LINC00483Q53H64 154 aa11.37□□□□□ -0.59
LSM11-201ENST00000286307 NOTCH1P46531 2555 aa11.36□□□□□ -0.59
LSM11-201ENST00000286307 NBEAL1Q6ZS30 2694 aa11.35□□□□□ -0.59
LSM11-201ENST00000286307 Q6ZRN7 208 aaPredicted RBP11.28□□□□□ -0.6
LSM11-201ENST00000286307 COL6A3P12111 3177 aa11.26□□□□□ -0.61
LSM11-201ENST00000286307 MAP1AP78559 2803 aaPredicted RBP11.26□□□□□ -0.61
LSM11-201ENST00000286307 LCA10Q71F78 164 aa11.23□□□□□ -0.61
LSM11-201ENST00000286307 UBR5O95071 2799 aaPredicted RBP11.21□□□□□ -0.62
LSM11-201ENST00000286307 M0QZ58 72 aa11.2□□□□□ -0.62
LSM11-201ENST00000286307 PLAC4Q8WY50 150 aa11.19□□□□□ -0.62
LSM11-201ENST00000286307 DMAC1Q96GE9 116 aa11.19□□□□□ -0.62
LSM11-201ENST00000286307 DNAH14Q0VDD8 3507 aa11.18□□□□□ -0.62
LSM11-201ENST00000286307 CRYBG3Q68DQ2 2970 aa11.18□□□□□ -0.62
LSM11-201ENST00000286307 TNRC18O15417 2968 aaPredicted RBP11.16□□□□□ -0.62
LSM11-201ENST00000286307 NBEAL2Q6ZNJ1 2754 aa11.15□□□□□ -0.62
LSM11-201ENST00000286307 KRTAP11-1Q8IUC1 163 aa11.15□□□□□ -0.62
LSM11-201ENST00000286307 Q1T7F1 81 aa11.14□□□□□ -0.63
LSM11-201ENST00000286307 REV3LO60673 3130 aa11.14□□□□□ -0.63
LSM11-201ENST00000286307 FRYLO94915 3013 aa11.13□□□□□ -0.63
LSM11-201ENST00000286307 VCANP13611 3396 aa11.12□□□□□ -0.63
LSM11-201ENST00000286307 KRTAP4-16G5E9R7 235 aaPredicted RBP11.12□□□□□ -0.63
LSM11-201ENST00000286307 LAMA1P25391 3075 aa11.11□□□□□ -0.63
LSM11-201ENST00000286307 ADM2Q7Z4H4 148 aa11.11□□□□□ -0.63
LSM11-201ENST00000286307 KMT2BQ9UMN6 2715 aaPredicted RBP11.09□□□□□ -0.63
LSM11-201ENST00000286307 LUZP6Q538Z0 58 aa11.08□□□□□ -0.64
LSM11-201ENST00000286307 FLG2Q5D862 2391 aaPredicted RBP11.07□□□□□ -0.64
LSM11-201ENST00000286307 ATMQ13315 3056 aa11.07□□□□□ -0.64
LSM11-201ENST00000286307 COL12A1Q99715 3063 aa11.07□□□□□ -0.64
LSM11-201ENST00000286307 ITPR1Q14643 2758 aa11.06□□□□□ -0.64
LSM11-201ENST00000286307 TACC2O95359 2948 aa11.03□□□□□ -0.64
LSM11-201ENST00000286307 NSD1Q96L73 2696 aaPredicted RBP11.03□□□□□ -0.64
LSM11-201ENST00000286307 DMXL2Q8TDJ6 3036 aa11.03□□□□□ -0.64
LSM11-201ENST00000286307 SPTBN5Q9NRC6 3674 aaKnown RBP11.02□□□□□ -0.64
LSM11-201ENST00000286307 STAB2Q8WWQ8 2551 aa11.02□□□□□ -0.65
LSM11-201ENST00000286307 HIVEP1P15822 2718 aa11.01□□□□□ -0.65
LSM11-201ENST00000286307 UTP20O75691 2785 aaKnown RBP11□□□□□ -0.65
LSM11-201ENST00000286307 RPS29P62273 56 aaKnown RBP10.98□□□□□ -0.65
LSM11-201ENST00000286307 BOD1L1Q8NFC6 3051 aa10.97□□□□□ -0.65
LSM11-201ENST00000286307 KRTAP13-2Q52LG2 175 aa10.97□□□□□ -0.65
LSM11-201ENST00000286307 H1FX-AS1Q4G0G2 97 aa10.96□□□□□ -0.66
LSM11-201ENST00000286307 EYSQ5T1H1 3165 aa10.95□□□□□ -0.66
LSM11-201ENST00000286307 NOTCH2NLQ7Z3S9 236 aa10.95□□□□□ -0.66
LSM11-201ENST00000286307 LRBAP50851 2863 aa10.94□□□□□ -0.66
LSM11-201ENST00000286307 C20orf166-AS1Q96NR2 134 aa10.92□□□□□ -0.66
LSM11-201ENST00000286307 LINC01558Q9Y6Z2 57 aa10.92□□□□□ -0.66
LSM11-201ENST00000286307 KTN1-AS1Q86SY8 53 aa10.92□□□□□ -0.66
LSM11-201ENST00000286307 FREM2Q5SZK8 3169 aa10.92□□□□□ -0.66
LSM11-201ENST00000286307 USP34Q70CQ2 3546 aa10.91□□□□□ -0.66
LSM11-201ENST00000286307 KRTAP7-1Q8IUC3 87 aa10.91□□□□□ -0.66
LSM11-201ENST00000286307 FLNCQ14315 2725 aa10.91□□□□□ -0.66
LSM11-201ENST00000286307 Q75L30 129 aa10.89□□□□□ -0.67
LSM11-201ENST00000286307 KALRNO60229 2985 aa10.89□□□□□ -0.67
LSM11-201ENST00000286307 DMBT1Q9UGM3 2413 aaPredicted RBP10.88□□□□□ -0.67
LSM11-201ENST00000286307 CFAP47Q6ZTR5 3102 aa10.87□□□□□ -0.67
LSM11-201ENST00000286307 RPL37P61927 97 aaKnown RBP10.87□□□□□ -0.67
LSM11-201ENST00000286307 TENM4Q6N022 2769 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms