RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 TGP01266 2768 aa7.45□□□□□ -1.22
SLC13A3-201ENST00000279027 HCG22E2RYF7 251 aa7.45□□□□□ -1.22
SLC13A3-201ENST00000279027 SPRR1AP35321 89 aa7.45□□□□□ -1.22
SLC13A3-201ENST00000279027 LINC00208Q96KT6 92 aa7.45□□□□□ -1.22
SLC13A3-201ENST00000279027 KRTAP11-1Q8IUC1 163 aa7.44□□□□□ -1.22
SLC13A3-201ENST00000279027 H7BZZ5 65 aa7.44□□□□□ -1.22
SLC13A3-201ENST00000279027 CNBPP62633 177 aaKnown RBP7.44□□□□□ -1.22
SLC13A3-201ENST00000279027 C4orf26Q17RF5 130 aa7.44□□□□□ -1.22
SLC13A3-201ENST00000279027 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.44□□□□□ -1.22
SLC13A3-201ENST00000279027 KRTAP4-16G5E9R7 235 aaPredicted RBP7.43□□□□□ -1.22
SLC13A3-201ENST00000279027 RTL8CO15255 209 aa7.43□□□□□ -1.22
SLC13A3-201ENST00000279027 PKIGQ9Y2B9 76 aa7.43□□□□□ -1.22
SLC13A3-201ENST00000279027 C1orf134Q5TEV5 83 aa7.42□□□□□ -1.22
SLC13A3-201ENST00000279027 MOBPQ13875 183 aa7.42□□□□□ -1.22
SLC13A3-201ENST00000279027 CASC2Q6XLA1 102 aa7.42□□□□□ -1.22
SLC13A3-201ENST00000279027 CIRBP-AS1Q8TBR5 109 aa7.41□□□□□ -1.22
SLC13A3-201ENST00000279027 A0A087WTM6 91 aa7.4□□□□□ -1.22
SLC13A3-201ENST00000279027 IGHV6-1A0A0B4J1U7 121 aa7.4□□□□□ -1.22
SLC13A3-201ENST00000279027 DSCR10P59022 87 aa7.4□□□□□ -1.22
SLC13A3-201ENST00000279027 BCE1O60756 84 aa7.4□□□□□ -1.23
SLC13A3-201ENST00000279027 NDUFC1O43677 76 aa7.39□□□□□ -1.23
SLC13A3-201ENST00000279027 SERP1Q9Y6X1 66 aa7.39□□□□□ -1.23
SLC13A3-201ENST00000279027 KLKP1Q107X0 134 aa7.38□□□□□ -1.23
SLC13A3-201ENST00000279027 ANK2Q01484 3957 aa7.36□□□□□ -1.23
SLC13A3-201ENST00000279027 OXTP01178 125 aa7.36□□□□□ -1.23
SLC13A3-201ENST00000279027 PCOTHQ58A44 107 aa7.36□□□□□ -1.23
SLC13A3-201ENST00000279027 OCR1Q9BZK8 76 aa7.36□□□□□ -1.23
SLC13A3-201ENST00000279027 TNP2Q05952 138 aa7.35□□□□□ -1.23
SLC13A3-201ENST00000279027 PSORS1C2Q9UIG4 136 aa7.35□□□□□ -1.23
SLC13A3-201ENST00000279027 SPRR4Q96PI1 79 aa7.35□□□□□ -1.23
SLC13A3-201ENST00000279027 RPS28P62857 69 aaKnown RBP7.34□□□□□ -1.23
SLC13A3-201ENST00000279027 H0Y9P7 68 aa7.34□□□□□ -1.23
SLC13A3-201ENST00000279027 BRK1Q8WUW1 75 aa7.33□□□□□ -1.24
SLC13A3-201ENST00000279027 RETNLBQ9BQ08 111 aa7.33□□□□□ -1.24
SLC13A3-201ENST00000279027 COL7A1Q02388 2944 aa7.32□□□□□ -1.24
SLC13A3-201ENST00000279027 SMIM26A0A096LP01 95 aa7.32□□□□□ -1.24
SLC13A3-201ENST00000279027 A0A1B0GW54 56 aa7.31□□□□□ -1.24
SLC13A3-201ENST00000279027 ZNF706Q9Y5V0 76 aaPredicted RBP7.31□□□□□ -1.24
SLC13A3-201ENST00000279027 HUWE1Q7Z6Z7 4374 aaKnown RBP7.3□□□□□ -1.24
SLC13A3-201ENST00000279027 C5orf47Q569G3 176 aa7.3□□□□□ -1.24
SLC13A3-201ENST00000279027 A0A0U1RQV1 116 aa7.29□□□□□ -1.24
SLC13A3-201ENST00000279027 hDV103S1A0JD37 113 aa7.28□□□□□ -1.24
SLC13A3-201ENST00000279027 PRR15Q8IV56 129 aa7.28□□□□□ -1.24
SLC13A3-201ENST00000279027 C1orf64Q8NEQ6 169 aa7.28□□□□□ -1.24
SLC13A3-201ENST00000279027 A8MWP4 228 aa7.27□□□□□ -1.25
SLC13A3-201ENST00000279027 SPACA4Q8TDM5 124 aa7.27□□□□□ -1.25
SLC13A3-201ENST00000279027 PSPHP1O15172 72 aa7.27□□□□□ -1.25
SLC13A3-201ENST00000279027 ATP5EP56381 51 aaPredicted RBP7.27□□□□□ -1.25
SLC13A3-201ENST00000279027 ZNF861PO60384 105 aa7.24□□□□□ -1.25
SLC13A3-201ENST00000279027 Q6ZRN7 208 aaPredicted RBP7.24□□□□□ -1.25
SLC13A3-201ENST00000279027 DNAH10Q8IVF4 4471 aa7.22□□□□□ -1.25
SLC13A3-201ENST00000279027 FAM229BQ4G0N7 80 aa7.22□□□□□ -1.25
SLC13A3-201ENST00000279027 C4orf48Q5BLP8 95 aa7.21□□□□□ -1.25
SLC13A3-201ENST00000279027 TRAV22A0A0B4J277 110 aa7.19□□□□□ -1.26
SLC13A3-201ENST00000279027 FBN3Q75N90 2809 aa7.19□□□□□ -1.26
SLC13A3-201ENST00000279027 Q5XG85 94 aa7.18□□□□□ -1.26
SLC13A3-201ENST00000279027 KRTAP10-2P60368 255 aa7.18□□□□□ -1.26
SLC13A3-201ENST00000279027 LINC00472Q9H8W2 130 aa7.18□□□□□ -1.26
SLC13A3-201ENST00000279027 IGLV8-61A0A075B6I0 122 aa7.18□□□□□ -1.26
SLC13A3-201ENST00000279027 IGLV7-43P04211 117 aa7.18□□□□□ -1.26
SLC13A3-201ENST00000279027 C8orf17Q9NRJ1 99 aa7.17□□□□□ -1.26
SLC13A3-201ENST00000279027 SPRR1BP22528 89 aa7.16□□□□□ -1.26
SLC13A3-201ENST00000279027 LINC00336Q6ZUF6 198 aa7.16□□□□□ -1.26
SLC13A3-201ENST00000279027 FP248Q71RG6 208 aaPredicted RBP7.16□□□□□ -1.26
SLC13A3-201ENST00000279027 WWC2-AS2Q96NR7 200 aa7.15□□□□□ -1.26
SLC13A3-201ENST00000279027 SVIPQ8NHG7 77 aa7.15□□□□□ -1.27
SLC13A3-201ENST00000279027 SMR3BP02814 79 aaPredicted RBP7.14□□□□□ -1.27
SLC13A3-201ENST00000279027 LYSTQ99698 3801 aa7.13□□□□□ -1.27
SLC13A3-201ENST00000279027 MMP24-AS1A0A0U1RRL7 71 aa7.13□□□□□ -1.27
SLC13A3-201ENST00000279027 A0A1B0GVX0 72 aa7.13□□□□□ -1.27
SLC13A3-201ENST00000279027 Q6ZR54 194 aa7.13□□□□□ -1.27
SLC13A3-201ENST00000279027 PLAC8Q9NZF1 115 aa7.13□□□□□ -1.27
SLC13A3-201ENST00000279027 MRPL34Q9BQ48 92 aaKnown RBP7.11□□□□□ -1.27
SLC13A3-201ENST00000279027 CMYA5Q8N3K9 4069 aa7.11□□□□□ -1.27
SLC13A3-201ENST00000279027 DNAH9Q9NYC9 4486 aa7.11□□□□□ -1.27
SLC13A3-201ENST00000279027 MEGF8Q7Z7M0 2845 aa7.11□□□□□ -1.27
SLC13A3-201ENST00000279027 A0A087X002 238 aa7.1□□□□□ -1.27
SLC13A3-201ENST00000279027 NOTCH2NLQ7Z3S9 236 aa7.1□□□□□ -1.27
SLC13A3-201ENST00000279027 PRR15LQ9BU68 103 aa7.1□□□□□ -1.27
SLC13A3-201ENST00000279027 CHKB-CPT1BH3BT56 60 aa7.1□□□□□ -1.27
SLC13A3-201ENST00000279027 KRTAP13-1Q8IUC0 172 aa7.09□□□□□ -1.28
SLC13A3-201ENST00000279027 PLECQ15149 4684 aaKnown RBP7.09□□□□□ -1.28
SLC13A3-201ENST00000279027 SPTSSBQ8NFR3 76 aa7.08□□□□□ -1.28
SLC13A3-201ENST00000279027 A8MUN3 132 aa7.08□□□□□ -1.28
SLC13A3-201ENST00000279027 PLA2G1BP04054 148 aaKnown RBP7.08□□□□□ -1.28
SLC13A3-201ENST00000279027 KRTAP29-1A8MX34 341 aaPredicted RBP7.07□□□□□ -1.28
SLC13A3-201ENST00000279027 KRTAP10-1P60331 282 aa7.07□□□□□ -1.28
SLC13A3-201ENST00000279027 SPAG11AQ6PDA7 123 aa7.06□□□□□ -1.28
SLC13A3-201ENST00000279027 IGKV2D-30A0A075B6S6 120 aa7.06□□□□□ -1.28
SLC13A3-201ENST00000279027 IGKV2-30P06310 120 aa7.06□□□□□ -1.28
SLC13A3-201ENST00000279027 TP53AIP1Q9HCN2 124 aa7.06□□□□□ -1.28
SLC13A3-201ENST00000279027 LINC00313P59037 77 aa7.05□□□□□ -1.28
SLC13A3-201ENST00000279027 COA5Q86WW8 74 aa7.04□□□□□ -1.28
SLC13A3-201ENST00000279027 TYMSOSQ8TAI1 123 aa7.04□□□□□ -1.28
SLC13A3-201ENST00000279027 A6NED7 52 aa7.03□□□□□ -1.28
SLC13A3-201ENST00000279027 ZCCHC13Q8WW36 166 aaKnown RBP7.02□□□□□ -1.29
SLC13A3-201ENST00000279027 H3BPC8 53 aa7.02□□□□□ -1.29
SLC13A3-201ENST00000279027 SSBP3-AS1Q7Z2R9 100 aa7.01□□□□□ -1.29
SLC13A3-201ENST00000279027 LINC00483Q53H64 154 aa7.01□□□□□ -1.29
SLC13A3-201ENST00000279027 PRO0628Q9UI54 55 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms