RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 C5orf47Q569G3 176 aa8.24□□□□□ -1.09
C9orf3-201ENST00000277198 TMEM254Q8TBM7 123 aa8.24□□□□□ -1.09
C9orf3-201ENST00000277198 F8WEM9 126 aa8.22□□□□□ -1.09
C9orf3-201ENST00000277198 BIRC6Q9NR09 4857 aa8.22□□□□□ -1.09
C9orf3-201ENST00000277198 REG3GQ6UW15 175 aa8.22□□□□□ -1.09
C9orf3-201ENST00000277198 Q8N9L7 120 aa8.22□□□□□ -1.09
C9orf3-201ENST00000277198 DNAH2Q9P225 4427 aa8.21□□□□□ -1.1
C9orf3-201ENST00000277198 UBE2BP63146 152 aa8.2□□□□□ -1.1
C9orf3-201ENST00000277198 Q5XG85 94 aa8.2□□□□□ -1.1
C9orf3-201ENST00000277198 ST20-AS1Q8NBB2 130 aa8.2□□□□□ -1.1
C9orf3-201ENST00000277198 A0A0U1RQV1 116 aa8.19□□□□□ -1.1
C9orf3-201ENST00000277198 CNBPP62633 177 aaKnown RBP8.19□□□□□ -1.1
C9orf3-201ENST00000277198 C16orf90A8MZG2 172 aa8.18□□□□□ -1.1
C9orf3-201ENST00000277198 HECTD4Q9Y4D8 3996 aa8.17□□□□□ -1.1
C9orf3-201ENST00000277198 SMIM29Q86T20 159 aa8.17□□□□□ -1.1
C9orf3-201ENST00000277198 UBE2DNLQ8IWF7 75 aa8.17□□□□□ -1.1
C9orf3-201ENST00000277198 FAT2Q9NYQ8 4349 aa8.17□□□□□ -1.1
C9orf3-201ENST00000277198 IGLV8-61A0A075B6I0 122 aa8.15□□□□□ -1.1
C9orf3-201ENST00000277198 SMIM26A0A096LP01 95 aa8.15□□□□□ -1.1
C9orf3-201ENST00000277198 DSCR10P59022 87 aa8.13□□□□□ -1.11
C9orf3-201ENST00000277198 C14orf177Q52M58 125 aa8.13□□□□□ -1.11
C9orf3-201ENST00000277198 C4orf26Q17RF5 130 aa8.13□□□□□ -1.11
C9orf3-201ENST00000277198 PKHD1P08F94 4074 aa8.12□□□□□ -1.11
C9orf3-201ENST00000277198 DNAH17Q9UFH2 4485 aa8.12□□□□□ -1.11
C9orf3-201ENST00000277198 A0A096LNI7 61 aa8.11□□□□□ -1.11
C9orf3-201ENST00000277198 H0Y9J4 135 aa8.11□□□□□ -1.11
C9orf3-201ENST00000277198 RTL8CO15255 209 aa8.11□□□□□ -1.11
C9orf3-201ENST00000277198 Q6ZR54 194 aa8.11□□□□□ -1.11
C9orf3-201ENST00000277198 PKIGQ9Y2B9 76 aa8.11□□□□□ -1.11
C9orf3-201ENST00000277198 IGFL1Q6UW32 110 aa8.1□□□□□ -1.11
C9orf3-201ENST00000277198 A0A1W2PNN7 141 aa8.09□□□□□ -1.11
C9orf3-201ENST00000277198 PSCAO43653 123 aa8.09□□□□□ -1.11
C9orf3-201ENST00000277198 K7EQZ3 153 aa8.08□□□□□ -1.12
C9orf3-201ENST00000277198 KRTAP1-5Q9BYS1 174 aa8.08□□□□□ -1.12
C9orf3-201ENST00000277198 HCG22E2RYF7 251 aa8.08□□□□□ -1.12
C9orf3-201ENST00000277198 SPRR1BP22528 89 aa8.08□□□□□ -1.12
C9orf3-201ENST00000277198 HRCT1Q6UXD1 115 aa8.08□□□□□ -1.12
C9orf3-201ENST00000277198 HIGD2AQ9BW72 106 aa8.08□□□□□ -1.12
C9orf3-201ENST00000277198 FAM30AQ9NZY2 134 aa8.07□□□□□ -1.12
C9orf3-201ENST00000277198 PKD1P98161 4303 aa8.07□□□□□ -1.12
C9orf3-201ENST00000277198 IGKV2-24A0A0C4DH68 120 aa8.06□□□□□ -1.12
C9orf3-201ENST00000277198 NBDYA0A0U1RRE5 68 aa8.06□□□□□ -1.12
C9orf3-201ENST00000277198 PRLHP81277 87 aa8.06□□□□□ -1.12
C9orf3-201ENST00000277198 FP248Q71RG6 208 aaPredicted RBP8.05□□□□□ -1.12
C9orf3-201ENST00000277198 A0A1B0GVY2 172 aa8.04□□□□□ -1.12
C9orf3-201ENST00000277198 ZCCHC13Q8WW36 166 aaKnown RBP8.04□□□□□ -1.12
C9orf3-201ENST00000277198 UBE2AP49459 152 aa8.04□□□□□ -1.12
C9orf3-201ENST00000277198 LINC00474Q9P2X8 69 aa8.04□□□□□ -1.12
C9orf3-201ENST00000277198 DNAH11Q96DT5 4516 aa8.03□□□□□ -1.12
C9orf3-201ENST00000277198 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.03□□□□□ -1.12
C9orf3-201ENST00000277198 A0A087WSZ3 146 aa8.02□□□□□ -1.12
C9orf3-201ENST00000277198 C1orf134Q5TEV5 83 aa8.02□□□□□ -1.12
C9orf3-201ENST00000277198 C9orf163Q8N9P6 203 aa8.02□□□□□ -1.13
C9orf3-201ENST00000277198 KIAA1109Q2LD37 5005 aa8.01□□□□□ -1.13
C9orf3-201ENST00000277198 LINC00336Q6ZUF6 198 aa8.01□□□□□ -1.13
C9orf3-201ENST00000277198 DYNC1H1Q14204 4646 aaKnown RBP7.99□□□□□ -1.13
C9orf3-201ENST00000277198 NDUFB1O75438 58 aa7.99□□□□□ -1.13
C9orf3-201ENST00000277198 PHF5AQ7RTV0 110 aaKnown RBP7.99□□□□□ -1.13
C9orf3-201ENST00000277198 HERC2O95714 4834 aa7.97□□□□□ -1.13
C9orf3-201ENST00000277198 LRCOL1A6NCL2 159 aa7.97□□□□□ -1.13
C9orf3-201ENST00000277198 A0A0G2JQZ4 141 aa7.97□□□□□ -1.13
C9orf3-201ENST00000277198 KRTAP29-1A8MX34 341 aaPredicted RBP7.97□□□□□ -1.13
C9orf3-201ENST00000277198 MP68P56378 58 aa7.96□□□□□ -1.14
C9orf3-201ENST00000277198 KRTAP11-1Q8IUC1 163 aa7.96□□□□□ -1.14
C9orf3-201ENST00000277198 H3BPC8 53 aa7.95□□□□□ -1.14
C9orf3-201ENST00000277198 CHTF8P0CG12 524 aa7.95□□□□□ -1.14
C9orf3-201ENST00000277198 PRR15Q8IV56 129 aa7.95□□□□□ -1.14
C9orf3-201ENST00000277198 A8MWP4 228 aa7.95□□□□□ -1.14
C9orf3-201ENST00000277198 CYP4F30PQ9H0H9 118 aa7.95□□□□□ -1.14
C9orf3-201ENST00000277198 LINC00472Q9H8W2 130 aa7.95□□□□□ -1.14
C9orf3-201ENST00000277198 hDV103S1A0JD37 113 aa7.94□□□□□ -1.14
C9orf3-201ENST00000277198 Q6ZRN7 208 aaPredicted RBP7.94□□□□□ -1.14
C9orf3-201ENST00000277198 LRP1BQ9NZR2 4599 aa7.94□□□□□ -1.14
C9orf3-201ENST00000277198 KRTAP13-1Q8IUC0 172 aa7.93□□□□□ -1.14
C9orf3-201ENST00000277198 PRO0628Q9UI54 55 aa7.93□□□□□ -1.14
C9orf3-201ENST00000277198 DEFB116Q30KQ4 102 aa7.93□□□□□ -1.14
C9orf3-201ENST00000277198 FAM229BQ4G0N7 80 aa7.92□□□□□ -1.14
C9orf3-201ENST00000277198 WFDC13Q8IUB5 93 aa7.92□□□□□ -1.14
C9orf3-201ENST00000277198 CASC2Q6XLA1 102 aa7.91□□□□□ -1.14
C9orf3-201ENST00000277198 KRTAP10-2P60368 255 aa7.91□□□□□ -1.14
C9orf3-201ENST00000277198 RPL37AP61513 92 aaKnown RBP7.91□□□□□ -1.14
C9orf3-201ENST00000277198 DNAH5Q8TE73 4624 aa7.91□□□□□ -1.14
C9orf3-201ENST00000277198 C1orf64Q8NEQ6 169 aa7.9□□□□□ -1.15
C9orf3-201ENST00000277198 TRAV22A0A0B4J277 110 aa7.89□□□□□ -1.15
C9orf3-201ENST00000277198 RYR1P21817 5038 aa7.88□□□□□ -1.15
C9orf3-201ENST00000277198 SPANXA2-OT1Q8N9U9 137 aa7.88□□□□□ -1.15
C9orf3-201ENST00000277198 KRTAP17-1Q9BYP8 105 aa7.88□□□□□ -1.15
C9orf3-201ENST00000277198 HSPG2P98160 4391 aa7.87□□□□□ -1.15
C9orf3-201ENST00000277198 SPACA4Q8TDM5 124 aa7.87□□□□□ -1.15
C9orf3-201ENST00000277198 Q1T7F1 81 aa7.86□□□□□ -1.15
C9orf3-201ENST00000277198 MPLKIPQ8TAP9 179 aa7.86□□□□□ -1.15
C9orf3-201ENST00000277198 LINC00483Q53H64 154 aa7.86□□□□□ -1.15
C9orf3-201ENST00000277198 APOBP04114 4563 aaKnown RBP7.85□□□□□ -1.15
C9orf3-201ENST00000277198 LINC00208Q96KT6 92 aa7.85□□□□□ -1.15
C9orf3-201ENST00000277198 H0Y9P7 68 aa7.84□□□□□ -1.15
C9orf3-201ENST00000277198 ZNF706Q9Y5V0 76 aaPredicted RBP7.84□□□□□ -1.15
C9orf3-201ENST00000277198 PANO1I0J062 215 aa7.84□□□□□ -1.15
C9orf3-201ENST00000277198 A0A087WTM6 91 aa7.83□□□□□ -1.16
C9orf3-201ENST00000277198 MMP24-AS1A0A0U1RRL7 71 aa7.82□□□□□ -1.16
C9orf3-201ENST00000277198 PCLOQ9Y6V0 5065 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms