RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 Q6ZRX8 168 aa6.64□□□□□ -1.35
UPF3B-201ENST00000276201 C7orf33Q8WU49 177 aa6.64□□□□□ -1.35
UPF3B-201ENST00000276201 ETDCA0A1B0GVM5 59 aa6.63□□□□□ -1.35
UPF3B-201ENST00000276201 SYCNQ0VAF6 134 aa6.63□□□□□ -1.35
UPF3B-201ENST00000276201 SMIM29Q86T20 159 aa6.63□□□□□ -1.35
UPF3B-201ENST00000276201 NKAPP1Q8N9T2 125 aa6.63□□□□□ -1.35
UPF3B-201ENST00000276201 BRK1Q8WUW1 75 aa6.62□□□□□ -1.35
UPF3B-201ENST00000276201 LINC01556Q5JQF7 62 aa6.62□□□□□ -1.35
UPF3B-201ENST00000276201 WFDC10BQ8IUB3 73 aa6.61□□□□□ -1.35
UPF3B-201ENST00000276201 C1orf137Q5JT78 98 aa6.61□□□□□ -1.35
UPF3B-201ENST00000276201 C1orf195Q5TG92 126 aa6.61□□□□□ -1.35
UPF3B-201ENST00000276201 Q6ZR54 194 aa6.61□□□□□ -1.35
UPF3B-201ENST00000276201 DSCR10P59022 87 aa6.6□□□□□ -1.35
UPF3B-201ENST00000276201 PRR15Q8IV56 129 aa6.6□□□□□ -1.35
UPF3B-201ENST00000276201 IGLV1-50A0A075B6I6 118 aa6.59□□□□□ -1.35
UPF3B-201ENST00000276201 MPLKIPQ8TAP9 179 aa6.59□□□□□ -1.35
UPF3B-201ENST00000276201 FAM30AQ9NZY2 134 aa6.59□□□□□ -1.35
UPF3B-201ENST00000276201 NDUFB1O75438 58 aa6.59□□□□□ -1.35
UPF3B-201ENST00000276201 SERTAD4-AS1Q5TG53 156 aa6.59□□□□□ -1.35
UPF3B-201ENST00000276201 Q9BRP9 147 aa6.59□□□□□ -1.35
UPF3B-201ENST00000276201 PKIGQ9Y2B9 76 aa6.58□□□□□ -1.36
UPF3B-201ENST00000276201 NBDYA0A0U1RRE5 68 aa6.58□□□□□ -1.36
UPF3B-201ENST00000276201 C1orf64Q8NEQ6 169 aa6.58□□□□□ -1.36
UPF3B-201ENST00000276201 DEFB105AQ8NG35 78 aa6.57□□□□□ -1.36
UPF3B-201ENST00000276201 KRTAP1-5Q9BYS1 174 aa6.57□□□□□ -1.36
UPF3B-201ENST00000276201 V9GYY9 64 aa6.57□□□□□ -1.36
UPF3B-201ENST00000276201 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.56□□□□□ -1.36
UPF3B-201ENST00000276201 HCG22E2RYF7 251 aa6.56□□□□□ -1.36
UPF3B-201ENST00000276201 RTL8CO15255 209 aa6.56□□□□□ -1.36
UPF3B-201ENST00000276201 IGLV8-61A0A075B6I0 122 aa6.55□□□□□ -1.36
UPF3B-201ENST00000276201 H3BPC8 53 aa6.55□□□□□ -1.36
UPF3B-201ENST00000276201 DNAH10Q8IVF4 4471 aa6.55□□□□□ -1.36
UPF3B-201ENST00000276201 FRAS1Q86XX4 4008 aa6.55□□□□□ -1.36
UPF3B-201ENST00000276201 EPPK1P58107 5090 aaKnown RBP6.55□□□□□ -1.36
UPF3B-201ENST00000276201 DNAH10OSP0CZ25 163 aa6.54□□□□□ -1.36
UPF3B-201ENST00000276201 C1orf134Q5TEV5 83 aa6.54□□□□□ -1.36
UPF3B-201ENST00000276201 K7EQZ3 153 aa6.53□□□□□ -1.36
UPF3B-201ENST00000276201 SPANXA2-OT1Q8N9U9 137 aa6.53□□□□□ -1.36
UPF3B-201ENST00000276201 IGKV2D-24A0A075B6R9 120 aa6.53□□□□□ -1.36
UPF3B-201ENST00000276201 RPL37AP8A6NKH3 93 aa6.51□□□□□ -1.37
UPF3B-201ENST00000276201 DNAH2Q9P225 4427 aa6.51□□□□□ -1.37
UPF3B-201ENST00000276201 PSCAO43653 123 aa6.51□□□□□ -1.37
UPF3B-201ENST00000276201 ST20-AS1Q8NBB2 130 aa6.51□□□□□ -1.37
UPF3B-201ENST00000276201 HECTD4Q9Y4D8 3996 aa6.5□□□□□ -1.37
UPF3B-201ENST00000276201 TRAV22A0A0B4J277 110 aa6.5□□□□□ -1.37
UPF3B-201ENST00000276201 MRPL55Q7Z7F7 128 aaKnown RBP6.5□□□□□ -1.37
UPF3B-201ENST00000276201 KRTAP7-1Q8IUC3 87 aa6.5□□□□□ -1.37
UPF3B-201ENST00000276201 DNAH17Q9UFH2 4485 aa6.5□□□□□ -1.37
UPF3B-201ENST00000276201 A0A1B0GVY2 172 aa6.5□□□□□ -1.37
UPF3B-201ENST00000276201 MP68P56378 58 aa6.5□□□□□ -1.37
UPF3B-201ENST00000276201 KRTAP29-1A8MX34 341 aaPredicted RBP6.49□□□□□ -1.37
UPF3B-201ENST00000276201 FAT2Q9NYQ8 4349 aa6.49□□□□□ -1.37
UPF3B-201ENST00000276201 REG3GQ6UW15 175 aa6.48□□□□□ -1.37
UPF3B-201ENST00000276201 Q6ZRN7 208 aaPredicted RBP6.48□□□□□ -1.37
UPF3B-201ENST00000276201 BIRC6Q9NR09 4857 aa6.48□□□□□ -1.37
UPF3B-201ENST00000276201 IGFL1Q6UW32 110 aa6.47□□□□□ -1.37
UPF3B-201ENST00000276201 FAM168BA1KXE4 195 aa6.46□□□□□ -1.38
UPF3B-201ENST00000276201 UBE2BP63146 152 aa6.46□□□□□ -1.38
UPF3B-201ENST00000276201 PMAIP1Q13794 54 aa6.45□□□□□ -1.38
UPF3B-201ENST00000276201 SEC61GP60059 68 aa6.45□□□□□ -1.38
UPF3B-201ENST00000276201 SPRR1BP22528 89 aa6.44□□□□□ -1.38
UPF3B-201ENST00000276201 LIMD2Q9BT23 127 aa6.44□□□□□ -1.38
UPF3B-201ENST00000276201 PKD1P98161 4303 aa6.43□□□□□ -1.38
UPF3B-201ENST00000276201 PKHD1P08F94 4074 aa6.42□□□□□ -1.38
UPF3B-201ENST00000276201 H0Y9J4 135 aa6.42□□□□□ -1.38
UPF3B-201ENST00000276201 Q5VV11 94 aa6.42□□□□□ -1.38
UPF3B-201ENST00000276201 C9orf163Q8N9P6 203 aa6.42□□□□□ -1.38
UPF3B-201ENST00000276201 LRCOL1A6NCL2 159 aa6.4□□□□□ -1.38
UPF3B-201ENST00000276201 H0Y9P7 68 aa6.4□□□□□ -1.38
UPF3B-201ENST00000276201 A8MWP4 228 aa6.4□□□□□ -1.39
UPF3B-201ENST00000276201 UBE2AP49459 152 aa6.4□□□□□ -1.39
UPF3B-201ENST00000276201 Q8N9P0 234 aaPredicted RBP6.4□□□□□ -1.39
UPF3B-201ENST00000276201 LINC00208Q96KT6 92 aa6.4□□□□□ -1.39
UPF3B-201ENST00000276201 A0A087WTM6 91 aa6.39□□□□□ -1.39
UPF3B-201ENST00000276201 PSPHP1O15172 72 aa6.39□□□□□ -1.39
UPF3B-201ENST00000276201 KRTAP10-2P60368 255 aa6.39□□□□□ -1.39
UPF3B-201ENST00000276201 CASC2Q6XLA1 102 aa6.39□□□□□ -1.39
UPF3B-201ENST00000276201 WFDC13Q8IUB5 93 aa6.39□□□□□ -1.39
UPF3B-201ENST00000276201 A0A087WSZ3 146 aa6.39□□□□□ -1.39
UPF3B-201ENST00000276201 A8MUN3 132 aa6.39□□□□□ -1.39
UPF3B-201ENST00000276201 CNBPP62633 177 aaKnown RBP6.39□□□□□ -1.39
UPF3B-201ENST00000276201 LINC00472Q9H8W2 130 aa6.39□□□□□ -1.39
UPF3B-201ENST00000276201 DNAH11Q96DT5 4516 aa6.39□□□□□ -1.39
UPF3B-201ENST00000276201 LOC101927531A0A1B0GV80 90 aa6.38□□□□□ -1.39
UPF3B-201ENST00000276201 C16orf90A8MZG2 172 aa6.38□□□□□ -1.39
UPF3B-201ENST00000276201 IGLV7-46A0A075B6I9 117 aa6.36□□□□□ -1.39
UPF3B-201ENST00000276201 Q75L30 129 aa6.36□□□□□ -1.39
UPF3B-201ENST00000276201 PRR4Q16378 134 aa6.36□□□□□ -1.39
UPF3B-201ENST00000276201 ASB16-AS1Q495Z4 193 aa6.35□□□□□ -1.39
UPF3B-201ENST00000276201 DYNC1H1Q14204 4646 aaKnown RBP6.34□□□□□ -1.39
UPF3B-201ENST00000276201 CD164Q04900 197 aa6.33□□□□□ -1.4
UPF3B-201ENST00000276201 TP53AIP1Q9HCN2 124 aa6.33□□□□□ -1.4
UPF3B-201ENST00000276201 MMP24-AS1A0A0U1RRL7 71 aa6.32□□□□□ -1.4
UPF3B-201ENST00000276201 RPL37AP61513 92 aaKnown RBP6.32□□□□□ -1.4
UPF3B-201ENST00000276201 DEFB116Q30KQ4 102 aa6.32□□□□□ -1.4
UPF3B-201ENST00000276201 KIAA1109Q2LD37 5005 aa6.32□□□□□ -1.4
UPF3B-201ENST00000276201 ATP11AUNQ6ZP68 121 aa6.32□□□□□ -1.4
UPF3B-201ENST00000276201 A0A096LNI7 61 aa6.31□□□□□ -1.4
UPF3B-201ENST00000276201 A0A0G2JQZ4 141 aa6.31□□□□□ -1.4
UPF3B-201ENST00000276201 A0A1W2PNN7 141 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms