RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 PLAC4Q8WY50 150 aa6.22□□□□□ -1.41
CTDSPL2-201ENST00000260327 TLX1NBP0CAT3 122 aa6.22□□□□□ -1.41
CTDSPL2-201ENST00000260327 IGLV7-46A0A075B6I9 117 aa6.21□□□□□ -1.41
CTDSPL2-201ENST00000260327 PLA2G2DQ9UNK4 145 aa6.21□□□□□ -1.42
CTDSPL2-201ENST00000260327 Q8NDZ9 215 aa6.21□□□□□ -1.42
CTDSPL2-201ENST00000260327 ATRQ13535 2644 aa6.2□□□□□ -1.42
CTDSPL2-201ENST00000260327 FRYLO94915 3013 aa6.2□□□□□ -1.42
CTDSPL2-201ENST00000260327 FLNBO75369 2602 aaKnown RBP6.2□□□□□ -1.42
CTDSPL2-201ENST00000260327 KALRNO60229 2985 aa6.19□□□□□ -1.42
CTDSPL2-201ENST00000260327 SPINK7P58062 85 aa6.19□□□□□ -1.42
CTDSPL2-201ENST00000260327 CNBPP62633 177 aaKnown RBP6.18□□□□□ -1.42
CTDSPL2-201ENST00000260327 CSAG1Q6PB30 78 aa6.18□□□□□ -1.42
CTDSPL2-201ENST00000260327 ZNF861PO60384 105 aa6.18□□□□□ -1.42
CTDSPL2-201ENST00000260327 LINC01558Q9Y6Z2 57 aa6.18□□□□□ -1.42
CTDSPL2-201ENST00000260327 KRTAP1-3Q8IUG1 177 aa6.18□□□□□ -1.42
CTDSPL2-201ENST00000260327 SPRR4Q96PI1 79 aa6.17□□□□□ -1.42
CTDSPL2-201ENST00000260327 K7EIL1 84 aa6.17□□□□□ -1.42
CTDSPL2-201ENST00000260327 COL6A3P12111 3177 aa6.15□□□□□ -1.42
CTDSPL2-201ENST00000260327 CFAP46Q8IYW2 2715 aa6.15□□□□□ -1.43
CTDSPL2-201ENST00000260327 HRES1P13985 223 aa6.14□□□□□ -1.43
CTDSPL2-201ENST00000260327 LUZP6Q538Z0 58 aa6.13□□□□□ -1.43
CTDSPL2-201ENST00000260327 REV3LO60673 3130 aa6.13□□□□□ -1.43
CTDSPL2-201ENST00000260327 BOD1L1Q8NFC6 3051 aa6.12□□□□□ -1.43
CTDSPL2-201ENST00000260327 LINC00483Q53H64 154 aa6.12□□□□□ -1.43
CTDSPL2-201ENST00000260327 KRTAP1-1Q07627 177 aa6.12□□□□□ -1.43
CTDSPL2-201ENST00000260327 GCN1Q92616 2671 aaKnown RBP6.12□□□□□ -1.43
CTDSPL2-201ENST00000260327 MMP24-AS1A0A0U1RRL7 71 aa6.1□□□□□ -1.43
CTDSPL2-201ENST00000260327 LINC00304Q8N9R0 145 aa6.1□□□□□ -1.43
CTDSPL2-201ENST00000260327 IGLV5-37A0A075B6J1 123 aa6.1□□□□□ -1.43
CTDSPL2-201ENST00000260327 A0A1B0GU33 70 aa6.09□□□□□ -1.43
CTDSPL2-201ENST00000260327 A0A087WTM6 91 aa6.09□□□□□ -1.43
CTDSPL2-201ENST00000260327 ZNF292O60281 2723 aa6.09□□□□□ -1.43
CTDSPL2-201ENST00000260327 NBEAL2Q6ZNJ1 2754 aa6.09□□□□□ -1.44
CTDSPL2-201ENST00000260327 ADGRG4Q8IZF6 3080 aa6.08□□□□□ -1.44
CTDSPL2-201ENST00000260327 IGLV7-43P04211 117 aa6.08□□□□□ -1.44
CTDSPL2-201ENST00000260327 MAST4O15021 2626 aa6.07□□□□□ -1.44
CTDSPL2-201ENST00000260327 MYO15AQ9UKN7 3530 aa6.05□□□□□ -1.44
CTDSPL2-201ENST00000260327 LRBAP50851 2863 aa6.04□□□□□ -1.44
CTDSPL2-201ENST00000260327 UNC79Q9P2D8 2635 aa6.04□□□□□ -1.44
CTDSPL2-201ENST00000260327 CAMK2N1Q7Z7J9 78 aa6.04□□□□□ -1.44
CTDSPL2-201ENST00000260327 SPTBN5Q9NRC6 3674 aaKnown RBP6.03□□□□□ -1.44
CTDSPL2-201ENST00000260327 HELZ2Q9BYK8 2649 aaKnown RBP6.02□□□□□ -1.45
CTDSPL2-201ENST00000260327 TEX15Q9BXT5 2789 aa6.02□□□□□ -1.45
CTDSPL2-201ENST00000260327 CFAP47Q6ZTR5 3102 aa6.02□□□□□ -1.45
CTDSPL2-201ENST00000260327 SMR3BP02814 79 aaPredicted RBP6.02□□□□□ -1.45
CTDSPL2-201ENST00000260327 DMXL2Q8TDJ6 3036 aa6.01□□□□□ -1.45
CTDSPL2-201ENST00000260327 EYSQ5T1H1 3165 aa6□□□□□ -1.45
CTDSPL2-201ENST00000260327 TACC2O95359 2948 aa6□□□□□ -1.45
CTDSPL2-201ENST00000260327 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.99□□□□□ -1.45
CTDSPL2-201ENST00000260327 ATMQ13315 3056 aa5.98□□□□□ -1.45
CTDSPL2-201ENST00000260327 SPRR1AP35321 89 aa5.98□□□□□ -1.45
CTDSPL2-201ENST00000260327 LINC00472Q9H8W2 130 aa5.98□□□□□ -1.45
CTDSPL2-201ENST00000260327 Q5VSD8 79 aa5.97□□□□□ -1.45
CTDSPL2-201ENST00000260327 Q5W150 140 aa5.97□□□□□ -1.45
CTDSPL2-201ENST00000260327 USP34Q70CQ2 3546 aa5.96□□□□□ -1.46
CTDSPL2-201ENST00000260327 ASH1LQ9NR48 2969 aaKnown RBP5.96□□□□□ -1.46
CTDSPL2-201ENST00000260327 WWC2-AS2Q96NR7 200 aa5.95□□□□□ -1.46
CTDSPL2-201ENST00000260327 NBEAL1Q6ZS30 2694 aa5.94□□□□□ -1.46
CTDSPL2-201ENST00000260327 DMAC1Q96GE9 116 aa5.94□□□□□ -1.46
CTDSPL2-201ENST00000260327 NOTCH1P46531 2555 aa5.93□□□□□ -1.46
CTDSPL2-201ENST00000260327 A8MU10 97 aa5.93□□□□□ -1.46
CTDSPL2-201ENST00000260327 KRTAP26-1Q6PEX3 210 aa5.92□□□□□ -1.46
CTDSPL2-201ENST00000260327 TEP1Q99973 2627 aaKnown RBP5.91□□□□□ -1.46
CTDSPL2-201ENST00000260327 A6NN06 94 aa5.9□□□□□ -1.46
CTDSPL2-201ENST00000260327 COL12A1Q99715 3063 aa5.9□□□□□ -1.46
CTDSPL2-201ENST00000260327 SETXQ7Z333 2677 aaKnown RBP5.9□□□□□ -1.47
CTDSPL2-201ENST00000260327 TNP2Q05952 138 aa5.9□□□□□ -1.47
CTDSPL2-201ENST00000260327 ITPR1Q14643 2758 aa5.89□□□□□ -1.47
CTDSPL2-201ENST00000260327 ADM2Q7Z4H4 148 aa5.89□□□□□ -1.47
CTDSPL2-201ENST00000260327 ZCCHC13Q8WW36 166 aaKnown RBP5.89□□□□□ -1.47
CTDSPL2-201ENST00000260327 A0A0A0MQY5 61 aa5.88□□□□□ -1.47
CTDSPL2-201ENST00000260327 WDFY3Q8IZQ1 3526 aa5.88□□□□□ -1.47
CTDSPL2-201ENST00000260327 Q6ZSA8 131 aa5.88□□□□□ -1.47
CTDSPL2-201ENST00000260327 ZZEF1O43149 2961 aa5.88□□□□□ -1.47
CTDSPL2-201ENST00000260327 UBR5O95071 2799 aaPredicted RBP5.87□□□□□ -1.47
CTDSPL2-201ENST00000260327 LOC400499M0QZD8 3231 aa5.87□□□□□ -1.47
CTDSPL2-201ENST00000260327 KRTAP1-5Q9BYS1 174 aa5.87□□□□□ -1.47
CTDSPL2-201ENST00000260327 ROMO1P60602 79 aa5.86□□□□□ -1.47
CTDSPL2-201ENST00000260327 COL6A5A8TX70 2615 aa5.86□□□□□ -1.47
CTDSPL2-201ENST00000260327 KRTAP29-1A8MX34 341 aaPredicted RBP5.85□□□□□ -1.47
CTDSPL2-201ENST00000260327 SPRR1BP22528 89 aa5.85□□□□□ -1.47
CTDSPL2-201ENST00000260327 SPATA8Q6RVD6 105 aa5.84□□□□□ -1.47
CTDSPL2-201ENST00000260327 IGSF10Q6WRI0 2623 aa5.83□□□□□ -1.48
CTDSPL2-201ENST00000260327 KRTAP4-16G5E9R7 235 aaPredicted RBP5.82□□□□□ -1.48
CTDSPL2-201ENST00000260327 Q6ZR54 194 aa5.82□□□□□ -1.48
CTDSPL2-201ENST00000260327 RPL37P61927 97 aaKnown RBP5.81□□□□□ -1.48
CTDSPL2-201ENST00000260327 H1FX-AS1Q4G0G2 97 aa5.81□□□□□ -1.48
CTDSPL2-201ENST00000260327 S4R3F8 94 aa5.81□□□□□ -1.48
CTDSPL2-201ENST00000260327 PLAC8Q9NZF1 115 aa5.8□□□□□ -1.48
CTDSPL2-201ENST00000260327 STAB1Q9NY15 2570 aa5.8□□□□□ -1.48
CTDSPL2-201ENST00000260327 ASB16-AS1Q495Z4 193 aa5.8□□□□□ -1.48
CTDSPL2-201ENST00000260327 BAHCC1Q9P281 2608 aa5.8□□□□□ -1.48
CTDSPL2-201ENST00000260327 FLNCQ14315 2725 aa5.78□□□□□ -1.48
CTDSPL2-201ENST00000260327 KRTAP16-1A8MUX0 517 aa5.78□□□□□ -1.48
CTDSPL2-201ENST00000260327 DMXL1Q9Y485 3027 aa5.77□□□□□ -1.49
CTDSPL2-201ENST00000260327 A0A087X002 238 aa5.77□□□□□ -1.49
CTDSPL2-201ENST00000260327 NOTCH2NLQ7Z3S9 236 aa5.77□□□□□ -1.49
CTDSPL2-201ENST00000260327 APCP25054 2843 aa5.77□□□□□ -1.49
CTDSPL2-201ENST00000260327 PANO1I0J062 215 aa5.77□□□□□ -1.49
CTDSPL2-201ENST00000260327 KRTAP25-1Q3LHN0 102 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms