RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 A0A1B0GVX0 72 aa12.24□□□□□ -0.45
PPFIA1-201ENST00000253925 A0A087WTM6 91 aa12.23□□□□□ -0.45
PPFIA1-201ENST00000253925 FAM229AH3BQW9 127 aa12.23□□□□□ -0.45
PPFIA1-201ENST00000253925 SPTBN5Q9NRC6 3674 aaKnown RBP12.23□□□□□ -0.45
PPFIA1-201ENST00000253925 FLNCQ14315 2725 aa12.22□□□□□ -0.45
PPFIA1-201ENST00000253925 MIR22HGQ0VDD5 57 aa12.22□□□□□ -0.45
PPFIA1-201ENST00000253925 SPINT4Q6UDR6 99 aa12.22□□□□□ -0.45
PPFIA1-201ENST00000253925 UNC79Q9P2D8 2635 aa12.21□□□□□ -0.45
PPFIA1-201ENST00000253925 DSCR10P59022 87 aa12.21□□□□□ -0.46
PPFIA1-201ENST00000253925 SPANXA2-OT1Q8N9U9 137 aa12.2□□□□□ -0.46
PPFIA1-201ENST00000253925 LRBAP50851 2863 aa12.19□□□□□ -0.46
PPFIA1-201ENST00000253925 SSBP3-AS1Q7Z2R9 100 aa12.19□□□□□ -0.46
PPFIA1-201ENST00000253925 SETXQ7Z333 2677 aaKnown RBP12.19□□□□□ -0.46
PPFIA1-201ENST00000253925 NBEAL2Q6ZNJ1 2754 aa12.19□□□□□ -0.46
PPFIA1-201ENST00000253925 DMXL2Q8TDJ6 3036 aa12.18□□□□□ -0.46
PPFIA1-201ENST00000253925 SPRR1AP35321 89 aa12.18□□□□□ -0.46
PPFIA1-201ENST00000253925 TYMSOSQ8TAI1 123 aa12.16□□□□□ -0.46
PPFIA1-201ENST00000253925 PSORS1C2Q9UIG4 136 aa12.13□□□□□ -0.47
PPFIA1-201ENST00000253925 KRTAP26-1Q6PEX3 210 aa12.13□□□□□ -0.47
PPFIA1-201ENST00000253925 EYSQ5T1H1 3165 aa12.1□□□□□ -0.47
PPFIA1-201ENST00000253925 COL12A1Q99715 3063 aa12.1□□□□□ -0.47
PPFIA1-201ENST00000253925 TACC2O95359 2948 aa12.09□□□□□ -0.47
PPFIA1-201ENST00000253925 ANAPC11Q9NYG5 84 aa12.08□□□□□ -0.48
PPFIA1-201ENST00000253925 ITPR1Q14643 2758 aa12.08□□□□□ -0.48
PPFIA1-201ENST00000253925 TEP1Q99973 2627 aaKnown RBP12.07□□□□□ -0.48
PPFIA1-201ENST00000253925 WWC2-AS2Q96NR7 200 aa12.07□□□□□ -0.48
PPFIA1-201ENST00000253925 IGLV7-43P04211 117 aa12.06□□□□□ -0.48
PPFIA1-201ENST00000253925 UBR5O95071 2799 aaPredicted RBP12.06□□□□□ -0.48
PPFIA1-201ENST00000253925 NOTCH1P46531 2555 aa12.05□□□□□ -0.48
PPFIA1-201ENST00000253925 Q96NJ1 140 aa12.05□□□□□ -0.48
PPFIA1-201ENST00000253925 PLA2G1BP04054 148 aaKnown RBP12.04□□□□□ -0.48
PPFIA1-201ENST00000253925 TNRC18O15417 2968 aaPredicted RBP12.04□□□□□ -0.48
PPFIA1-201ENST00000253925 Q75L30 129 aa12.03□□□□□ -0.48
PPFIA1-201ENST00000253925 Q8N9P0 234 aaPredicted RBP12□□□□□ -0.49
PPFIA1-201ENST00000253925 COL6A5A8TX70 2615 aa12□□□□□ -0.49
PPFIA1-201ENST00000253925 PRR26Q8N8Z3 221 aa11.99□□□□□ -0.49
PPFIA1-201ENST00000253925 H3BS24 57 aa11.97□□□□□ -0.49
PPFIA1-201ENST00000253925 Q5VV11 94 aa11.96□□□□□ -0.49
PPFIA1-201ENST00000253925 SPRR1BP22528 89 aa11.95□□□□□ -0.5
PPFIA1-201ENST00000253925 STAB1Q9NY15 2570 aa11.95□□□□□ -0.5
PPFIA1-201ENST00000253925 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.94□□□□□ -0.5
PPFIA1-201ENST00000253925 PRAC1Q96KF2 57 aa11.94□□□□□ -0.5
PPFIA1-201ENST00000253925 USP34Q70CQ2 3546 aa11.93□□□□□ -0.5
PPFIA1-201ENST00000253925 LOC400499M0QZD8 3231 aa11.93□□□□□ -0.5
PPFIA1-201ENST00000253925 LINC01554Q52M75 96 aa11.92□□□□□ -0.5
PPFIA1-201ENST00000253925 CFAP47Q6ZTR5 3102 aa11.91□□□□□ -0.5
PPFIA1-201ENST00000253925 IGLV7-46A0A075B6I9 117 aa11.91□□□□□ -0.5
PPFIA1-201ENST00000253925 TNP2Q05952 138 aa11.91□□□□□ -0.5
PPFIA1-201ENST00000253925 ZZEF1O43149 2961 aa11.91□□□□□ -0.5
PPFIA1-201ENST00000253925 DMXL1Q9Y485 3027 aa11.91□□□□□ -0.5
PPFIA1-201ENST00000253925 UTP20O75691 2785 aaKnown RBP11.9□□□□□ -0.5
PPFIA1-201ENST00000253925 MMP24-AS1A0A0U1RRL7 71 aa11.88□□□□□ -0.51
PPFIA1-201ENST00000253925 LINC00304Q8N9R0 145 aa11.87□□□□□ -0.51
PPFIA1-201ENST00000253925 KRTAP4-16G5E9R7 235 aaPredicted RBP11.86□□□□□ -0.51
PPFIA1-201ENST00000253925 LINC00472Q9H8W2 130 aa11.86□□□□□ -0.51
PPFIA1-201ENST00000253925 KRTAP1-5Q9BYS1 174 aa11.86□□□□□ -0.51
PPFIA1-201ENST00000253925 LINC01558Q9Y6Z2 57 aa11.85□□□□□ -0.51
PPFIA1-201ENST00000253925 HRNRQ86YZ3 2850 aaPredicted RBP11.83□□□□□ -0.52
PPFIA1-201ENST00000253925 MYO15AQ9UKN7 3530 aa11.83□□□□□ -0.52
PPFIA1-201ENST00000253925 NBEAL1Q6ZS30 2694 aa11.81□□□□□ -0.52
PPFIA1-201ENST00000253925 ZANQ9Y493 2812 aa11.8□□□□□ -0.52
PPFIA1-201ENST00000253925 PLAC8Q9NZF1 115 aa11.79□□□□□ -0.52
PPFIA1-201ENST00000253925 CRIPTQ9P021 101 aa11.79□□□□□ -0.52
PPFIA1-201ENST00000253925 SPINK7P58062 85 aa11.76□□□□□ -0.53
PPFIA1-201ENST00000253925 ITPR2Q14571 2701 aa11.75□□□□□ -0.53
PPFIA1-201ENST00000253925 ASH1LQ9NR48 2969 aaKnown RBP11.71□□□□□ -0.53
PPFIA1-201ENST00000253925 APCP25054 2843 aa11.7□□□□□ -0.54
PPFIA1-201ENST00000253925 HRES1P13985 223 aa11.69□□□□□ -0.54
PPFIA1-201ENST00000253925 Q8N1X5 172 aa11.68□□□□□ -0.54
PPFIA1-201ENST00000253925 C9orf92A6NGG3 77 aa11.67□□□□□ -0.54
PPFIA1-201ENST00000253925 CSAG1Q6PB30 78 aa11.66□□□□□ -0.54
PPFIA1-201ENST00000253925 SMR3BP02814 79 aaPredicted RBP11.65□□□□□ -0.54
PPFIA1-201ENST00000253925 NSD1Q96L73 2696 aaPredicted RBP11.65□□□□□ -0.54
PPFIA1-201ENST00000253925 KRTAP29-1A8MX34 341 aaPredicted RBP11.61□□□□□ -0.55
PPFIA1-201ENST00000253925 NIPBLQ6KC79 2804 aaeCLIP11.6□□□□□ -0.55
PPFIA1-201ENST00000253925 ZCCHC13Q8WW36 166 aaKnown RBP11.59□□□□□ -0.55
PPFIA1-201ENST00000253925 A0A0D9SG42 100 aa11.58□□□□□ -0.56
PPFIA1-201ENST00000253925 LINC00483Q53H64 154 aa11.58□□□□□ -0.56
PPFIA1-201ENST00000253925 BAHCC1Q9P281 2608 aa11.56□□□□□ -0.56
PPFIA1-201ENST00000253925 CELSR2Q9HCU4 2923 aa11.54□□□□□ -0.56
PPFIA1-201ENST00000253925 KRTAP7-1Q8IUC3 87 aa11.54□□□□□ -0.56
PPFIA1-201ENST00000253925 PANO1I0J062 215 aa11.53□□□□□ -0.56
PPFIA1-201ENST00000253925 HIVEP1P15822 2718 aa11.53□□□□□ -0.56
PPFIA1-201ENST00000253925 KMT2BQ9UMN6 2715 aaPredicted RBP11.52□□□□□ -0.57
PPFIA1-201ENST00000253925 Q5W150 140 aa11.51□□□□□ -0.57
PPFIA1-201ENST00000253925 A0A1B0GU33 70 aa11.49□□□□□ -0.57
PPFIA1-201ENST00000253925 NF1P21359 2839 aa11.49□□□□□ -0.57
PPFIA1-201ENST00000253925 Q6ZR54 194 aa11.48□□□□□ -0.57
PPFIA1-201ENST00000253925 FBN2P35556 2912 aa11.47□□□□□ -0.57
PPFIA1-201ENST00000253925 STAB2Q8WWQ8 2551 aa11.47□□□□□ -0.57
PPFIA1-201ENST00000253925 LCE6AA0A183 80 aa11.47□□□□□ -0.57
PPFIA1-201ENST00000253925 KRTAP11-1Q8IUC1 163 aa11.43□□□□□ -0.58
PPFIA1-201ENST00000253925 DCHS2Q6V1P9 2916 aa11.4□□□□□ -0.58
PPFIA1-201ENST00000253925 A6NN06 94 aa11.39□□□□□ -0.59
PPFIA1-201ENST00000253925 WDFY3Q8IZQ1 3526 aa11.38□□□□□ -0.59
PPFIA1-201ENST00000253925 CRYBG3Q68DQ2 2970 aa11.37□□□□□ -0.59
PPFIA1-201ENST00000253925 A8MU10 97 aa11.36□□□□□ -0.59
PPFIA1-201ENST00000253925 MXRA5Q9NR99 2828 aa11.35□□□□□ -0.59
PPFIA1-201ENST00000253925 Q6ZRN7 208 aaPredicted RBP11.34□□□□□ -0.59
PPFIA1-201ENST00000253925 DMAC1Q96GE9 116 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms