RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 F8WDY8 70 aa10.29□□□□□ -0.76
SLC6A8-201ENST00000253122 DSCR10P59022 87 aa10.29□□□□□ -0.76
SLC6A8-201ENST00000253122 SPINK6Q6UWN8 80 aa10.28□□□□□ -0.76
SLC6A8-201ENST00000253122 AKAP9Q99996 3911 aa10.25□□□□□ -0.77
SLC6A8-201ENST00000253122 IGFL1Q6UW32 110 aa10.25□□□□□ -0.77
SLC6A8-201ENST00000253122 IGLV9-49A0A0B4J1Y8 123 aa10.24□□□□□ -0.77
SLC6A8-201ENST00000253122 CASC10Q5T4H9 136 aa10.23□□□□□ -0.77
SLC6A8-201ENST00000253122 LIMD2Q9BT23 127 aa10.22□□□□□ -0.77
SLC6A8-201ENST00000253122 STAB2Q8WWQ8 2551 aa10.22□□□□□ -0.77
SLC6A8-201ENST00000253122 H3BNG1 76 aa10.21□□□□□ -0.77
SLC6A8-201ENST00000253122 Q1T7F1 81 aa10.2□□□□□ -0.78
SLC6A8-201ENST00000253122 VWFP04275 2813 aa10.19□□□□□ -0.78
SLC6A8-201ENST00000253122 SPAG11AQ6PDA7 123 aa10.19□□□□□ -0.78
SLC6A8-201ENST00000253122 RETNLBQ9BQ08 111 aa10.19□□□□□ -0.78
SLC6A8-201ENST00000253122 TENM1Q9UKZ4 2725 aa10.18□□□□□ -0.78
SLC6A8-201ENST00000253122 PRR15Q8IV56 129 aa10.17□□□□□ -0.78
SLC6A8-201ENST00000253122 SPRR4Q96PI1 79 aa10.16□□□□□ -0.78
SLC6A8-201ENST00000253122 LINC00588Q9Y4M8 146 aa10.16□□□□□ -0.78
SLC6A8-201ENST00000253122 KRTAP10-11P60412 298 aa10.15□□□□□ -0.78
SLC6A8-201ENST00000253122 IGHV6-1A0A0B4J1U7 121 aa10.15□□□□□ -0.78
SLC6A8-201ENST00000253122 KRTAP26-1Q6PEX3 210 aa10.14□□□□□ -0.79
SLC6A8-201ENST00000253122 CHTF8P0CG12 524 aa10.13□□□□□ -0.79
SLC6A8-201ENST00000253122 DNAH10OSP0CZ25 163 aa10.13□□□□□ -0.79
SLC6A8-201ENST00000253122 PHF5AQ7RTV0 110 aaKnown RBP10.13□□□□□ -0.79
SLC6A8-201ENST00000253122 FBN1P35555 2871 aaKnown RBP10.12□□□□□ -0.79
SLC6A8-201ENST00000253122 COA5Q86WW8 74 aa10.12□□□□□ -0.79
SLC6A8-201ENST00000253122 DMBT1Q9UGM3 2413 aaPredicted RBP10.11□□□□□ -0.79
SLC6A8-201ENST00000253122 PKD1L1Q8TDX9 2849 aa10.11□□□□□ -0.79
SLC6A8-201ENST00000253122 CYP4F30PQ9H0H9 118 aa10.1□□□□□ -0.79
SLC6A8-201ENST00000253122 TLX1NBP0CAT3 122 aa10.09□□□□□ -0.79
SLC6A8-201ENST00000253122 A8MWP4 228 aa10.09□□□□□ -0.79
SLC6A8-201ENST00000253122 PLA2G2DQ9UNK4 145 aa10.08□□□□□ -0.8
SLC6A8-201ENST00000253122 H3BPC8 53 aa10.07□□□□□ -0.8
SLC6A8-201ENST00000253122 C14orf177Q52M58 125 aa10.05□□□□□ -0.8
SLC6A8-201ENST00000253122 TNP2Q05952 138 aa10.05□□□□□ -0.8
SLC6A8-201ENST00000253122 SPRR1AP35321 89 aa10.03□□□□□ -0.8
SLC6A8-201ENST00000253122 ZCCHC13Q8WW36 166 aaKnown RBP10.03□□□□□ -0.8
SLC6A8-201ENST00000253122 Q5VV11 94 aa10.03□□□□□ -0.8
SLC6A8-201ENST00000253122 C16orf90A8MZG2 172 aa10.02□□□□□ -0.8
SLC6A8-201ENST00000253122 Q8N9P0 234 aaPredicted RBP10.02□□□□□ -0.8
SLC6A8-201ENST00000253122 A8MU10 97 aa10.02□□□□□ -0.81
SLC6A8-201ENST00000253122 CD164Q04900 197 aa10□□□□□ -0.81
SLC6A8-201ENST00000253122 IGLV5-37A0A075B6J1 123 aa10□□□□□ -0.81
SLC6A8-201ENST00000253122 KRTAP4-16G5E9R7 235 aaPredicted RBP9.99□□□□□ -0.81
SLC6A8-201ENST00000253122 TENM3Q9P273 2699 aa9.99□□□□□ -0.81
SLC6A8-201ENST00000253122 SPANXA2-OT1Q8N9U9 137 aa9.99□□□□□ -0.81
SLC6A8-201ENST00000253122 LOC101927531A0A1B0GV80 90 aa9.98□□□□□ -0.81
SLC6A8-201ENST00000253122 CNBPP62633 177 aaKnown RBP9.97□□□□□ -0.81
SLC6A8-201ENST00000253122 ATP11AUNQ6ZP68 121 aa9.96□□□□□ -0.81
SLC6A8-201ENST00000253122 KTN1-AS1Q86SY8 53 aa9.96□□□□□ -0.81
SLC6A8-201ENST00000253122 MDFIQ99750 246 aa9.95□□□□□ -0.82
SLC6A8-201ENST00000253122 K7EIL1 84 aa9.95□□□□□ -0.82
SLC6A8-201ENST00000253122 TP53AIP1Q9HCN2 124 aa9.95□□□□□ -0.82
SLC6A8-201ENST00000253122 IGLV8-61A0A075B6I0 122 aa9.94□□□□□ -0.82
SLC6A8-201ENST00000253122 LCE6AA0A183 80 aa9.93□□□□□ -0.82
SLC6A8-201ENST00000253122 SPINK1P00995 79 aa9.93□□□□□ -0.82
SLC6A8-201ENST00000253122 MOBPQ13875 183 aa9.92□□□□□ -0.82
SLC6A8-201ENST00000253122 ANAPC11Q9NYG5 84 aa9.92□□□□□ -0.82
SLC6A8-201ENST00000253122 KRTAP7-1Q8IUC3 87 aa9.9□□□□□ -0.82
SLC6A8-201ENST00000253122 CIRBP-AS1Q8TBR5 109 aa9.89□□□□□ -0.83
SLC6A8-201ENST00000253122 C8orf17Q9NRJ1 99 aa9.89□□□□□ -0.83
SLC6A8-201ENST00000253122 FLG2Q5D862 2391 aaPredicted RBP9.87□□□□□ -0.83
SLC6A8-201ENST00000253122 RBM12B-AS1Q9P1G2 102 aa9.87□□□□□ -0.83
SLC6A8-201ENST00000253122 IGLV7-46A0A075B6I9 117 aa9.86□□□□□ -0.83
SLC6A8-201ENST00000253122 PRR26Q8N8Z3 221 aa9.85□□□□□ -0.83
SLC6A8-201ENST00000253122 TRRAPQ9Y4A5 3859 aa9.85□□□□□ -0.83
SLC6A8-201ENST00000253122 KRTAP29-1A8MX34 341 aaPredicted RBP9.85□□□□□ -0.83
SLC6A8-201ENST00000253122 SRRM2Q9UQ35 2752 aaKnown RBP9.85□□□□□ -0.83
SLC6A8-201ENST00000253122 ZNF706Q9Y5V0 76 aaPredicted RBP9.85□□□□□ -0.83
SLC6A8-201ENST00000253122 LINC00472Q9H8W2 130 aa9.84□□□□□ -0.83
SLC6A8-201ENST00000253122 CDC42SE1Q9NRR8 79 aa9.84□□□□□ -0.83
SLC6A8-201ENST00000253122 MMP24-AS1A0A0U1RRL7 71 aa9.84□□□□□ -0.83
SLC6A8-201ENST00000253122 MRPL34Q9BQ48 92 aaKnown RBP9.84□□□□□ -0.83
SLC6A8-201ENST00000253122 Q75L30 129 aa9.83□□□□□ -0.84
SLC6A8-201ENST00000253122 TENM2Q9NT68 2774 aa9.83□□□□□ -0.84
SLC6A8-201ENST00000253122 LCA10Q71F78 164 aa9.81□□□□□ -0.84
SLC6A8-201ENST00000253122 C7orf65Q6ZTY9 151 aa9.8□□□□□ -0.84
SLC6A8-201ENST00000253122 A0A1B0GVX0 72 aa9.79□□□□□ -0.84
SLC6A8-201ENST00000253122 ACYP2P14621 99 aa9.78□□□□□ -0.84
SLC6A8-201ENST00000253122 A0A1B0GU69 56 aa9.78□□□□□ -0.84
SLC6A8-201ENST00000253122 SPINK7P58062 85 aa9.77□□□□□ -0.85
SLC6A8-201ENST00000253122 C9orf163Q8N9P6 203 aa9.75□□□□□ -0.85
SLC6A8-201ENST00000253122 KRTAP1-5Q9BYS1 174 aa9.74□□□□□ -0.85
SLC6A8-201ENST00000253122 IGKV2D-30A0A075B6S6 120 aa9.73□□□□□ -0.85
SLC6A8-201ENST00000253122 IGKV2-30P06310 120 aa9.73□□□□□ -0.85
SLC6A8-201ENST00000253122 PRAC1Q96KF2 57 aa9.73□□□□□ -0.85
SLC6A8-201ENST00000253122 HRES1P13985 223 aa9.73□□□□□ -0.85
SLC6A8-201ENST00000253122 KRTAP11-1Q8IUC1 163 aa9.73□□□□□ -0.85
SLC6A8-201ENST00000253122 LINC01558Q9Y6Z2 57 aa9.72□□□□□ -0.85
SLC6A8-201ENST00000253122 SPRR1BP22528 89 aa9.67□□□□□ -0.86
SLC6A8-201ENST00000253122 NBDYA0A0U1RRE5 68 aa9.66□□□□□ -0.86
SLC6A8-201ENST00000253122 NUPR2A6NF83 97 aa9.64□□□□□ -0.87
SLC6A8-201ENST00000253122 C4orf48Q5BLP8 95 aa9.63□□□□□ -0.87
SLC6A8-201ENST00000253122 COL7A1Q02388 2944 aa9.62□□□□□ -0.87
SLC6A8-201ENST00000253122 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.62□□□□□ -0.87
SLC6A8-201ENST00000253122 PSORS1C2Q9UIG4 136 aa9.62□□□□□ -0.87
SLC6A8-201ENST00000253122 C8orf87E5RJ46 101 aa9.61□□□□□ -0.87
SLC6A8-201ENST00000253122 PANO1I0J062 215 aa9.6□□□□□ -0.87
SLC6A8-201ENST00000253122 LINC00313P59037 77 aa9.6□□□□□ -0.87
SLC6A8-201ENST00000253122 CSMD3Q7Z407 3707 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms