RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 A0A1W2PNN7 141 aa11.97□□□□□ -0.49
SNX4-201ENST00000251775 UBE2BP63146 152 aa11.97□□□□□ -0.49
SNX4-201ENST00000251775 LINC00476Q8WZB0 136 aa11.97□□□□□ -0.49
SNX4-201ENST00000251775 KRTAP1-5Q9BYS1 174 aa11.96□□□□□ -0.49
SNX4-201ENST00000251775 TRAV22A0A0B4J277 110 aa11.96□□□□□ -0.5
SNX4-201ENST00000251775 PSPHP1O15172 72 aa11.96□□□□□ -0.5
SNX4-201ENST00000251775 MRPL55Q7Z7F7 128 aaKnown RBP11.95□□□□□ -0.5
SNX4-201ENST00000251775 MGAM2Q2M2H8 2515 aa11.95□□□□□ -0.5
SNX4-201ENST00000251775 DEFB116Q30KQ4 102 aa11.94□□□□□ -0.5
SNX4-201ENST00000251775 IGFL1Q6UW32 110 aa11.92□□□□□ -0.5
SNX4-201ENST00000251775 WFDC13Q8IUB5 93 aa11.92□□□□□ -0.5
SNX4-201ENST00000251775 NDUFB1O75438 58 aa11.91□□□□□ -0.5
SNX4-201ENST00000251775 REG3GQ6UW15 175 aa11.89□□□□□ -0.51
SNX4-201ENST00000251775 STAB2Q8WWQ8 2551 aa11.88□□□□□ -0.51
SNX4-201ENST00000251775 A0A096LNI7 61 aa11.87□□□□□ -0.51
SNX4-201ENST00000251775 COL7A1Q02388 2944 aa11.87□□□□□ -0.51
SNX4-201ENST00000251775 MP68P56378 58 aa11.87□□□□□ -0.51
SNX4-201ENST00000251775 SEC61GP60059 68 aa11.86□□□□□ -0.51
SNX4-201ENST00000251775 A0A087WSZ3 146 aa11.86□□□□□ -0.51
SNX4-201ENST00000251775 APLNQ9ULZ1 77 aa11.86□□□□□ -0.51
SNX4-201ENST00000251775 LINC00208Q96KT6 92 aa11.85□□□□□ -0.51
SNX4-201ENST00000251775 A8MUN3 132 aa11.85□□□□□ -0.51
SNX4-201ENST00000251775 IGKV2-24A0A0C4DH68 120 aa11.84□□□□□ -0.51
SNX4-201ENST00000251775 KRTAP29-1A8MX34 341 aaPredicted RBP11.84□□□□□ -0.51
SNX4-201ENST00000251775 RPL37AP61513 92 aaKnown RBP11.84□□□□□ -0.51
SNX4-201ENST00000251775 UBE2DNLQ8IWF7 75 aa11.84□□□□□ -0.51
SNX4-201ENST00000251775 B9D2Q9BPU9 175 aa11.84□□□□□ -0.51
SNX4-201ENST00000251775 CNBPP62633 177 aaKnown RBP11.83□□□□□ -0.52
SNX4-201ENST00000251775 DNAH10Q8IVF4 4471 aa11.83□□□□□ -0.52
SNX4-201ENST00000251775 LYSTQ99698 3801 aa11.83□□□□□ -0.52
SNX4-201ENST00000251775 C16orf90A8MZG2 172 aa11.83□□□□□ -0.52
SNX4-201ENST00000251775 PMAIP1Q13794 54 aa11.82□□□□□ -0.52
SNX4-201ENST00000251775 IGLV8-61A0A075B6I0 122 aa11.82□□□□□ -0.52
SNX4-201ENST00000251775 DNAH9Q9NYC9 4486 aa11.8□□□□□ -0.52
SNX4-201ENST00000251775 PRLHP81277 87 aa11.8□□□□□ -0.52
SNX4-201ENST00000251775 Q5VV11 94 aa11.79□□□□□ -0.52
SNX4-201ENST00000251775 H0Y9P7 68 aa11.78□□□□□ -0.52
SNX4-201ENST00000251775 SPANXA2-OT1Q8N9U9 137 aa11.78□□□□□ -0.52
SNX4-201ENST00000251775 A8MU10 97 aa11.77□□□□□ -0.53
SNX4-201ENST00000251775 MDFIQ99750 246 aa11.76□□□□□ -0.53
SNX4-201ENST00000251775 CASC2Q6XLA1 102 aa11.75□□□□□ -0.53
SNX4-201ENST00000251775 CHTF8P0CG12 524 aa11.75□□□□□ -0.53
SNX4-201ENST00000251775 H3BPC8 53 aa11.74□□□□□ -0.53
SNX4-201ENST00000251775 Q8N9P0 234 aaPredicted RBP11.73□□□□□ -0.53
SNX4-201ENST00000251775 KRTAP11-1Q8IUC1 163 aa11.73□□□□□ -0.53
SNX4-201ENST00000251775 C14orf177Q52M58 125 aa11.71□□□□□ -0.53
SNX4-201ENST00000251775 UBE2AP49459 152 aa11.7□□□□□ -0.54
SNX4-201ENST00000251775 PHF5AQ7RTV0 110 aaKnown RBP11.7□□□□□ -0.54
SNX4-201ENST00000251775 C9orf163Q8N9P6 203 aa11.69□□□□□ -0.54
SNX4-201ENST00000251775 DYNC2H1Q8NCM8 4307 aaKnown RBP11.69□□□□□ -0.54
SNX4-201ENST00000251775 A8MWP4 228 aa11.68□□□□□ -0.54
SNX4-201ENST00000251775 LINC00472Q9H8W2 130 aa11.68□□□□□ -0.54
SNX4-201ENST00000251775 TENM2Q9NT68 2774 aa11.68□□□□□ -0.54
SNX4-201ENST00000251775 CSMD3Q7Z407 3707 aa11.68□□□□□ -0.54
SNX4-201ENST00000251775 LIMD2Q9BT23 127 aa11.67□□□□□ -0.54
SNX4-201ENST00000251775 DNAH7Q8WXX0 4024 aa11.67□□□□□ -0.54
SNX4-201ENST00000251775 NBDYA0A0U1RRE5 68 aa11.66□□□□□ -0.54
SNX4-201ENST00000251775 CHKB-CPT1BH3BT56 60 aa11.65□□□□□ -0.54
SNX4-201ENST00000251775 PRR15LQ9BU68 103 aa11.64□□□□□ -0.55
SNX4-201ENST00000251775 Q6ZRN7 208 aaPredicted RBP11.63□□□□□ -0.55
SNX4-201ENST00000251775 SPRR1BP22528 89 aa11.61□□□□□ -0.55
SNX4-201ENST00000251775 NUPR2A6NF83 97 aa11.61□□□□□ -0.55
SNX4-201ENST00000251775 PLECQ15149 4684 aaKnown RBP11.61□□□□□ -0.55
SNX4-201ENST00000251775 PANO1I0J062 215 aa11.6□□□□□ -0.55
SNX4-201ENST00000251775 SRRM2Q9UQ35 2752 aaKnown RBP11.59□□□□□ -0.55
SNX4-201ENST00000251775 MMP24-AS1A0A0U1RRL7 71 aa11.59□□□□□ -0.55
SNX4-201ENST00000251775 COA5Q86WW8 74 aa11.59□□□□□ -0.55
SNX4-201ENST00000251775 H0Y9J4 135 aa11.58□□□□□ -0.56
SNX4-201ENST00000251775 IGLV7-46A0A075B6I9 117 aa11.57□□□□□ -0.56
SNX4-201ENST00000251775 Q75L30 129 aa11.55□□□□□ -0.56
SNX4-201ENST00000251775 LOC101927531A0A1B0GV80 90 aa11.54□□□□□ -0.56
SNX4-201ENST00000251775 LCA10Q71F78 164 aa11.54□□□□□ -0.56
SNX4-201ENST00000251775 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.5□□□□□ -0.57
SNX4-201ENST00000251775 PCOTHQ58A44 107 aa11.49□□□□□ -0.57
SNX4-201ENST00000251775 SPTSSBQ8NFR3 76 aa11.49□□□□□ -0.57
SNX4-201ENST00000251775 A6NED7 52 aa11.49□□□□□ -0.57
SNX4-201ENST00000251775 CD164Q04900 197 aa11.49□□□□□ -0.57
SNX4-201ENST00000251775 KRTAP13-1Q8IUC0 172 aa11.48□□□□□ -0.57
SNX4-201ENST00000251775 SPACA4Q8TDM5 124 aa11.47□□□□□ -0.57
SNX4-201ENST00000251775 STARD9Q9P2P6 4700 aa11.47□□□□□ -0.57
SNX4-201ENST00000251775 ASB16-AS1Q495Z4 193 aa11.47□□□□□ -0.57
SNX4-201ENST00000251775 ATP11AUNQ6ZP68 121 aa11.47□□□□□ -0.57
SNX4-201ENST00000251775 KTN1-AS1Q86SY8 53 aa11.46□□□□□ -0.58
SNX4-201ENST00000251775 Q96NJ1 140 aa11.46□□□□□ -0.58
SNX4-201ENST00000251775 A0A087WTM6 91 aa11.45□□□□□ -0.58
SNX4-201ENST00000251775 VPS13DQ5THJ4 4388 aa11.44□□□□□ -0.58
SNX4-201ENST00000251775 TP53AIP1Q9HCN2 124 aa11.43□□□□□ -0.58
SNX4-201ENST00000251775 Q6ZR54 194 aa11.42□□□□□ -0.58
SNX4-201ENST00000251775 PLAC8Q9NZF1 115 aa11.42□□□□□ -0.58
SNX4-201ENST00000251775 MOBPQ13875 183 aa11.41□□□□□ -0.58
SNX4-201ENST00000251775 LINC01558Q9Y6Z2 57 aa11.41□□□□□ -0.58
SNX4-201ENST00000251775 PRKDCP78527 4128 aaKnown RBP11.41□□□□□ -0.58
SNX4-201ENST00000251775 SPAG11AQ6PDA7 123 aa11.4□□□□□ -0.58
SNX4-201ENST00000251775 CDC42SE1Q9NRR8 79 aa11.4□□□□□ -0.58
SNX4-201ENST00000251775 A6NN06 94 aa11.39□□□□□ -0.59
SNX4-201ENST00000251775 C8orf17Q9NRJ1 99 aa11.39□□□□□ -0.59
SNX4-201ENST00000251775 RTL8CO15255 209 aa11.36□□□□□ -0.59
SNX4-201ENST00000251775 IGLV9-49A0A0B4J1Y8 123 aa11.35□□□□□ -0.59
SNX4-201ENST00000251775 HRES1P13985 223 aa11.34□□□□□ -0.59
SNX4-201ENST00000251775 NDUFS5O43920 106 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms