RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.33□□□□□ -0.76
HOXD3-201ENST00000249440 IGFL1Q6UW32 110 aa10.33□□□□□ -0.76
HOXD3-201ENST00000249440 APLNQ9ULZ1 77 aa10.33□□□□□ -0.76
HOXD3-201ENST00000249440 TENM2Q9NT68 2774 aa10.32□□□□□ -0.76
HOXD3-201ENST00000249440 STARD9Q9P2P6 4700 aa10.31□□□□□ -0.76
HOXD3-201ENST00000249440 K7EQZ3 153 aa10.31□□□□□ -0.76
HOXD3-201ENST00000249440 FAM30AQ9NZY2 134 aa10.31□□□□□ -0.76
HOXD3-201ENST00000249440 IGLV8-61A0A075B6I0 122 aa10.3□□□□□ -0.76
HOXD3-201ENST00000249440 C4orf48Q5BLP8 95 aa10.3□□□□□ -0.76
HOXD3-201ENST00000249440 PLECQ15149 4684 aaKnown RBP10.3□□□□□ -0.76
HOXD3-201ENST00000249440 DNAH7Q8WXX0 4024 aa10.3□□□□□ -0.76
HOXD3-201ENST00000249440 C4orf26Q17RF5 130 aa10.3□□□□□ -0.76
HOXD3-201ENST00000249440 A0A0G2JQZ4 141 aa10.28□□□□□ -0.76
HOXD3-201ENST00000249440 UBE2AP49459 152 aa10.27□□□□□ -0.77
HOXD3-201ENST00000249440 H0Y9J4 135 aa10.27□□□□□ -0.77
HOXD3-201ENST00000249440 PHF5AQ7RTV0 110 aaKnown RBP10.27□□□□□ -0.77
HOXD3-201ENST00000249440 CHTF8P0CG12 524 aa10.26□□□□□ -0.77
HOXD3-201ENST00000249440 LCE6AA0A183 80 aa10.25□□□□□ -0.77
HOXD3-201ENST00000249440 HCG22E2RYF7 251 aa10.25□□□□□ -0.77
HOXD3-201ENST00000249440 PKIGQ9Y2B9 76 aa10.25□□□□□ -0.77
HOXD3-201ENST00000249440 A0A087WSZ3 146 aa10.24□□□□□ -0.77
HOXD3-201ENST00000249440 SMIM26A0A096LP01 95 aa10.24□□□□□ -0.77
HOXD3-201ENST00000249440 C9orf163Q8N9P6 203 aa10.24□□□□□ -0.77
HOXD3-201ENST00000249440 KRTAP11-1Q8IUC1 163 aa10.23□□□□□ -0.77
HOXD3-201ENST00000249440 HRCT1Q6UXD1 115 aa10.23□□□□□ -0.77
HOXD3-201ENST00000249440 B9D2Q9BPU9 175 aa10.23□□□□□ -0.77
HOXD3-201ENST00000249440 DYNC2H1Q8NCM8 4307 aaKnown RBP10.22□□□□□ -0.77
HOXD3-201ENST00000249440 SPRR1BP22528 89 aa10.22□□□□□ -0.77
HOXD3-201ENST00000249440 DEFB116Q30KQ4 102 aa10.21□□□□□ -0.77
HOXD3-201ENST00000249440 LINC00474Q9P2X8 69 aa10.21□□□□□ -0.77
HOXD3-201ENST00000249440 LRCOL1A6NCL2 159 aa10.21□□□□□ -0.78
HOXD3-201ENST00000249440 NBDYA0A0U1RRE5 68 aa10.19□□□□□ -0.78
HOXD3-201ENST00000249440 FP248Q71RG6 208 aaPredicted RBP10.18□□□□□ -0.78
HOXD3-201ENST00000249440 SRRM2Q9UQ35 2752 aaKnown RBP10.16□□□□□ -0.78
HOXD3-201ENST00000249440 NUPR2A6NF83 97 aa10.15□□□□□ -0.78
HOXD3-201ENST00000249440 ZCCHC13Q8WW36 166 aaKnown RBP10.15□□□□□ -0.78
HOXD3-201ENST00000249440 WFDC13Q8IUB5 93 aa10.14□□□□□ -0.79
HOXD3-201ENST00000249440 Q6ZRN7 208 aaPredicted RBP10.13□□□□□ -0.79
HOXD3-201ENST00000249440 RPL37AP61513 92 aaKnown RBP10.12□□□□□ -0.79
HOXD3-201ENST00000249440 PANO1I0J062 215 aa10.11□□□□□ -0.79
HOXD3-201ENST00000249440 KRTAP13-1Q8IUC0 172 aa10.1□□□□□ -0.79
HOXD3-201ENST00000249440 PRR15Q8IV56 129 aa10.09□□□□□ -0.79
HOXD3-201ENST00000249440 LINC00472Q9H8W2 130 aa10.09□□□□□ -0.79
HOXD3-201ENST00000249440 KRTAP29-1A8MX34 341 aaPredicted RBP10.08□□□□□ -0.8
HOXD3-201ENST00000249440 A8MWP4 228 aa10.08□□□□□ -0.8
HOXD3-201ENST00000249440 FAM229BQ4G0N7 80 aa10.08□□□□□ -0.8
HOXD3-201ENST00000249440 MP68P56378 58 aa10.07□□□□□ -0.8
HOXD3-201ENST00000249440 KMT2AQ03164 3969 aa10.06□□□□□ -0.8
HOXD3-201ENST00000249440 NDUFB1O75438 58 aa10.06□□□□□ -0.8
HOXD3-201ENST00000249440 CASC2Q6XLA1 102 aa10.06□□□□□ -0.8
HOXD3-201ENST00000249440 SPACA4Q8TDM5 124 aa10.06□□□□□ -0.8
HOXD3-201ENST00000249440 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.04□□□□□ -0.8
HOXD3-201ENST00000249440 VPS13DQ5THJ4 4388 aa10.03□□□□□ -0.8
HOXD3-201ENST00000249440 hDV103S1A0JD37 113 aa10.03□□□□□ -0.8
HOXD3-201ENST00000249440 MPLKIPQ8TAP9 179 aa10.01□□□□□ -0.81
HOXD3-201ENST00000249440 LINC00336Q6ZUF6 198 aa10.01□□□□□ -0.81
HOXD3-201ENST00000249440 C1orf64Q8NEQ6 169 aa10.01□□□□□ -0.81
HOXD3-201ENST00000249440 A0A087WTM6 91 aa10□□□□□ -0.81
HOXD3-201ENST00000249440 LINC00208Q96KT6 92 aa10□□□□□ -0.81
HOXD3-201ENST00000249440 CYP4F30PQ9H0H9 118 aa10□□□□□ -0.81
HOXD3-201ENST00000249440 IGLV9-49A0A0B4J1Y8 123 aa9.99□□□□□ -0.81
HOXD3-201ENST00000249440 TRAV22A0A0B4J277 110 aa9.99□□□□□ -0.81
HOXD3-201ENST00000249440 HYDINQ4G0P3 5121 aa9.99□□□□□ -0.81
HOXD3-201ENST00000249440 H3BPC8 53 aa9.99□□□□□ -0.81
HOXD3-201ENST00000249440 H0Y9P7 68 aa9.98□□□□□ -0.81
HOXD3-201ENST00000249440 LINC00483Q53H64 154 aa9.97□□□□□ -0.81
HOXD3-201ENST00000249440 ZNF706Q9Y5V0 76 aaPredicted RBP9.96□□□□□ -0.81
HOXD3-201ENST00000249440 DNAH2Q9P225 4427 aa9.96□□□□□ -0.82
HOXD3-201ENST00000249440 MMP24-AS1A0A0U1RRL7 71 aa9.94□□□□□ -0.82
HOXD3-201ENST00000249440 RTL8CO15255 209 aa9.94□□□□□ -0.82
HOXD3-201ENST00000249440 PRR4Q16378 134 aa9.94□□□□□ -0.82
HOXD3-201ENST00000249440 PRO0628Q9UI54 55 aa9.94□□□□□ -0.82
HOXD3-201ENST00000249440 IGLV5-52A0A0A0MRZ9 124 aa9.92□□□□□ -0.82
HOXD3-201ENST00000249440 Q96NJ1 140 aa9.92□□□□□ -0.82
HOXD3-201ENST00000249440 PSORS1C2Q9UIG4 136 aa9.92□□□□□ -0.82
HOXD3-201ENST00000249440 HECTD4Q9Y4D8 3996 aa9.92□□□□□ -0.82
HOXD3-201ENST00000249440 SPANXA2-OT1Q8N9U9 137 aa9.9□□□□□ -0.82
HOXD3-201ENST00000249440 WWC2-AS2Q96NR7 200 aa9.89□□□□□ -0.83
HOXD3-201ENST00000249440 PLAC8Q9NZF1 115 aa9.89□□□□□ -0.83
HOXD3-201ENST00000249440 SACSQ9NZJ4 4579 aa9.88□□□□□ -0.83
HOXD3-201ENST00000249440 Q1T7F1 81 aa9.88□□□□□ -0.83
HOXD3-201ENST00000249440 Q6ZR54 194 aa9.88□□□□□ -0.83
HOXD3-201ENST00000249440 ZNF861PO60384 105 aa9.88□□□□□ -0.83
HOXD3-201ENST00000249440 MOBPQ13875 183 aa9.88□□□□□ -0.83
HOXD3-201ENST00000249440 ASB16-AS1Q495Z4 193 aa9.86□□□□□ -0.83
HOXD3-201ENST00000249440 TP53AIP1Q9HCN2 124 aa9.85□□□□□ -0.83
HOXD3-201ENST00000249440 KMT2CQ8NEZ4 4911 aaKnown RBP9.85□□□□□ -0.83
HOXD3-201ENST00000249440 BRK1Q8WUW1 75 aa9.85□□□□□ -0.83
HOXD3-201ENST00000249440 C8orf17Q9NRJ1 99 aa9.84□□□□□ -0.83
HOXD3-201ENST00000249440 DNAH17Q9UFH2 4485 aa9.83□□□□□ -0.84
HOXD3-201ENST00000249440 DNAH8Q96JB1 4490 aa9.83□□□□□ -0.84
HOXD3-201ENST00000249440 CDK2AP2O75956 126 aa9.82□□□□□ -0.84
HOXD3-201ENST00000249440 FRAS1Q86XX4 4008 aa9.82□□□□□ -0.84
HOXD3-201ENST00000249440 A0A1B0GVX0 72 aa9.82□□□□□ -0.84
HOXD3-201ENST00000249440 ANAPC11Q9NYG5 84 aa9.82□□□□□ -0.84
HOXD3-201ENST00000249440 IGHV6-1A0A0B4J1U7 121 aa9.81□□□□□ -0.84
HOXD3-201ENST00000249440 C1orf134Q5TEV5 83 aa9.8□□□□□ -0.84
HOXD3-201ENST00000249440 ALMS1Q8TCU4 4167 aa9.79□□□□□ -0.84
HOXD3-201ENST00000249440 V9GYY9 64 aa9.77□□□□□ -0.85
HOXD3-201ENST00000249440 NDUFS5O43920 106 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms