RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 SMCPP49901 116 aaPredicted RBP6.83□□□□□ -1.32
TNFAIP3-201ENST00000237289 TYMSOSQ8TAI1 123 aa6.83□□□□□ -1.32
TNFAIP3-201ENST00000237289 KRTAP11-1Q8IUC1 163 aa6.82□□□□□ -1.32
TNFAIP3-201ENST00000237289 JMJD7-PLA2G4BH0Y9G9 81 aa6.81□□□□□ -1.32
TNFAIP3-201ENST00000237289 ERC2-IT1O76042 136 aa6.81□□□□□ -1.32
TNFAIP3-201ENST00000237289 FAM218AQ96MZ4 157 aa6.81□□□□□ -1.32
TNFAIP3-201ENST00000237289 SPRR4Q96PI1 79 aa6.81□□□□□ -1.32
TNFAIP3-201ENST00000237289 MOBPQ13875 183 aa6.8□□□□□ -1.32
TNFAIP3-201ENST00000237289 ANAPC11Q9NYG5 84 aa6.8□□□□□ -1.32
TNFAIP3-201ENST00000237289 MPLKIPQ8TAP9 179 aa6.79□□□□□ -1.32
TNFAIP3-201ENST00000237289 A0A087WVE0 104 aa6.79□□□□□ -1.32
TNFAIP3-201ENST00000237289 PRO0461Q9UI25 63 aa6.79□□□□□ -1.32
TNFAIP3-201ENST00000237289 Q6JHZ5 121 aa6.78□□□□□ -1.32
TNFAIP3-201ENST00000237289 KMT2AQ03164 3969 aa6.78□□□□□ -1.32
TNFAIP3-201ENST00000237289 COX7CP15954 63 aa6.76□□□□□ -1.33
TNFAIP3-201ENST00000237289 Q8NBF4 154 aa6.76□□□□□ -1.33
TNFAIP3-201ENST00000237289 KRTAP4-16G5E9R7 235 aaPredicted RBP6.76□□□□□ -1.33
TNFAIP3-201ENST00000237289 DNAH1Q9P2D7 4330 aa6.76□□□□□ -1.33
TNFAIP3-201ENST00000237289 PDE6GP18545 87 aa6.75□□□□□ -1.33
TNFAIP3-201ENST00000237289 SNURFQ9Y675 71 aa6.75□□□□□ -1.33
TNFAIP3-201ENST00000237289 PRR26Q8N8Z3 221 aa6.74□□□□□ -1.33
TNFAIP3-201ENST00000237289 SACSQ9NZJ4 4579 aa6.74□□□□□ -1.33
TNFAIP3-201ENST00000237289 TMEM258P61165 79 aa6.74□□□□□ -1.33
TNFAIP3-201ENST00000237289 FAM229BQ4G0N7 80 aa6.74□□□□□ -1.33
TNFAIP3-201ENST00000237289 SSBP3-AS1Q7Z2R9 100 aa6.74□□□□□ -1.33
TNFAIP3-201ENST00000237289 Q8N377 158 aa6.73□□□□□ -1.33
TNFAIP3-201ENST00000237289 CCKP06307 115 aa6.73□□□□□ -1.33
TNFAIP3-201ENST00000237289 LYSTQ99698 3801 aa6.73□□□□□ -1.33
TNFAIP3-201ENST00000237289 Q6Q795 121 aa6.73□□□□□ -1.33
TNFAIP3-201ENST00000237289 FAM236DA0A1B0GTK5 79 aa6.72□□□□□ -1.33
TNFAIP3-201ENST00000237289 FAM236CP0DP71 79 aa6.72□□□□□ -1.33
TNFAIP3-201ENST00000237289 SERP2Q8N6R1 65 aa6.72□□□□□ -1.33
TNFAIP3-201ENST00000237289 LINC00304Q8N9R0 145 aa6.71□□□□□ -1.34
TNFAIP3-201ENST00000237289 RYR2Q92736 4967 aa6.7□□□□□ -1.34
TNFAIP3-201ENST00000237289 FLG2Q5D862 2391 aaPredicted RBP6.7□□□□□ -1.34
TNFAIP3-201ENST00000237289 LIMD2Q9BT23 127 aa6.7□□□□□ -1.34
TNFAIP3-201ENST00000237289 SPAG11AQ6PDA7 123 aa6.7□□□□□ -1.34
TNFAIP3-201ENST00000237289 IMUPQ9GZP8 106 aa6.7□□□□□ -1.34
TNFAIP3-201ENST00000237289 KRTAP13-1Q8IUC0 172 aa6.69□□□□□ -1.34
TNFAIP3-201ENST00000237289 IGLV5-48A0A075B6I7 105 aa6.69□□□□□ -1.34
TNFAIP3-201ENST00000237289 KMT2CQ8NEZ4 4911 aaKnown RBP6.69□□□□□ -1.34
TNFAIP3-201ENST00000237289 DNAH6Q9C0G6 4158 aa6.67□□□□□ -1.34
TNFAIP3-201ENST00000237289 C4orf26Q17RF5 130 aa6.67□□□□□ -1.34
TNFAIP3-201ENST00000237289 HYDINQ4G0P3 5121 aa6.67□□□□□ -1.34
TNFAIP3-201ENST00000237289 DNAH10Q8IVF4 4471 aa6.67□□□□□ -1.34
TNFAIP3-201ENST00000237289 NREPQ16612 68 aa6.66□□□□□ -1.34
TNFAIP3-201ENST00000237289 OXTP01178 125 aa6.66□□□□□ -1.34
TNFAIP3-201ENST00000237289 SPRR1BP22528 89 aa6.66□□□□□ -1.34
TNFAIP3-201ENST00000237289 DNAH17Q9UFH2 4485 aa6.66□□□□□ -1.34
TNFAIP3-201ENST00000237289 V9GYY9 64 aa6.65□□□□□ -1.34
TNFAIP3-201ENST00000237289 FAM240AA0A1B0GVK7 77 aa6.65□□□□□ -1.34
TNFAIP3-201ENST00000237289 PRR4Q16378 134 aa6.65□□□□□ -1.35
TNFAIP3-201ENST00000237289 A0A087WSZ3 146 aa6.64□□□□□ -1.35
TNFAIP3-201ENST00000237289 LINC00483Q53H64 154 aa6.64□□□□□ -1.35
TNFAIP3-201ENST00000237289 SPTSSBQ8NFR3 76 aa6.63□□□□□ -1.35
TNFAIP3-201ENST00000237289 SPINK1P00995 79 aa6.62□□□□□ -1.35
TNFAIP3-201ENST00000237289 IGFL1Q6UW32 110 aa6.62□□□□□ -1.35
TNFAIP3-201ENST00000237289 A0A087X002 238 aa6.62□□□□□ -1.35
TNFAIP3-201ENST00000237289 NDUFB1O75438 58 aa6.62□□□□□ -1.35
TNFAIP3-201ENST00000237289 LINC00846Q9NV44 126 aa6.62□□□□□ -1.35
TNFAIP3-201ENST00000237289 C1orf195Q5TG92 126 aa6.61□□□□□ -1.35
TNFAIP3-201ENST00000237289 LINC01600Q96MT4 127 aa6.61□□□□□ -1.35
TNFAIP3-201ENST00000237289 A0A0G2JQZ4 141 aa6.6□□□□□ -1.35
TNFAIP3-201ENST00000237289 DMBT1Q9UGM3 2413 aaPredicted RBP6.6□□□□□ -1.35
TNFAIP3-201ENST00000237289 DNAH2Q9P225 4427 aa6.6□□□□□ -1.35
TNFAIP3-201ENST00000237289 TRBV7-7A0A0K0K1E9 115 aa6.59□□□□□ -1.35
TNFAIP3-201ENST00000237289 LINC01547P58512 204 aaPredicted RBP6.59□□□□□ -1.35
TNFAIP3-201ENST00000237289 SMIM29Q86T20 159 aa6.59□□□□□ -1.35
TNFAIP3-201ENST00000237289 DNAH11Q96DT5 4516 aa6.59□□□□□ -1.35
TNFAIP3-201ENST00000237289 DNAH5Q8TE73 4624 aa6.58□□□□□ -1.36
TNFAIP3-201ENST00000237289 CD164Q04900 197 aa6.57□□□□□ -1.36
TNFAIP3-201ENST00000237289 TRBV7-4A0A0J9YYF1 115 aa6.57□□□□□ -1.36
TNFAIP3-201ENST00000237289 KRTAP1-4P0C5Y4 121 aa6.56□□□□□ -1.36
TNFAIP3-201ENST00000237289 LOC110117498A0A087WWA1 95 aa6.56□□□□□ -1.36
TNFAIP3-201ENST00000237289 BPY2O14599 106 aa6.56□□□□□ -1.36
TNFAIP3-201ENST00000237289 Q6ZQT0 140 aa6.55□□□□□ -1.36
TNFAIP3-201ENST00000237289 SMIM26A0A096LP01 95 aa6.55□□□□□ -1.36
TNFAIP3-201ENST00000237289 DYNC1H1Q14204 4646 aaKnown RBP6.55□□□□□ -1.36
TNFAIP3-201ENST00000237289 A0A1B0GW54 56 aa6.55□□□□□ -1.36
TNFAIP3-201ENST00000237289 KRTAP13-2Q52LG2 175 aa6.55□□□□□ -1.36
TNFAIP3-201ENST00000237289 IGKV4-1P06312 121 aa6.54□□□□□ -1.36
TNFAIP3-201ENST00000237289 IGLV8-61A0A075B6I0 122 aa6.53□□□□□ -1.36
TNFAIP3-201ENST00000237289 RYR3Q15413 4870 aa6.53□□□□□ -1.36
TNFAIP3-201ENST00000237289 LRP1BQ9NZR2 4599 aa6.53□□□□□ -1.36
TNFAIP3-201ENST00000237289 ATP5EP2Q5VTU8 51 aa6.53□□□□□ -1.36
TNFAIP3-201ENST00000237289 DEFB116Q30KQ4 102 aa6.52□□□□□ -1.37
TNFAIP3-201ENST00000237289 SERP1Q9Y6X1 66 aa6.51□□□□□ -1.37
TNFAIP3-201ENST00000237289 A0A1W2PNM2 257 aa6.51□□□□□ -1.37
TNFAIP3-201ENST00000237289 PSPHP1O15172 72 aa6.51□□□□□ -1.37
TNFAIP3-201ENST00000237289 RETNLBQ9BQ08 111 aa6.51□□□□□ -1.37
TNFAIP3-201ENST00000237289 KRTAP29-1A8MX34 341 aaPredicted RBP6.5□□□□□ -1.37
TNFAIP3-201ENST00000237289 KRTAP10-4P60372 401 aaPredicted RBP6.5□□□□□ -1.37
TNFAIP3-201ENST00000237289 KRTAP4-5Q9BYR2 181 aa6.5□□□□□ -1.37
TNFAIP3-201ENST00000237289 PRO0628Q9UI54 55 aa6.49□□□□□ -1.37
TNFAIP3-201ENST00000237289 TRAV7A0A075B6U4 112 aa6.49□□□□□ -1.37
TNFAIP3-201ENST00000237289 Q8N9L7 120 aa6.49□□□□□ -1.37
TNFAIP3-201ENST00000237289 MP68P56378 58 aa6.48□□□□□ -1.37
TNFAIP3-201ENST00000237289 FAT2Q9NYQ8 4349 aa6.47□□□□□ -1.37
TNFAIP3-201ENST00000237289 IGHV6-1A0A0B4J1U7 121 aa6.47□□□□□ -1.37
TNFAIP3-201ENST00000237289 IGLV7-46A0A075B6I9 117 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 246.9 ms