RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 HIGD2AQ9BW72 106 aa9.83□□□□□ -0.84
CTSD-201ENST00000236671 HYDINQ4G0P3 5121 aa9.83□□□□□ -0.84
CTSD-201ENST00000236671 FAM30AQ9NZY2 134 aa9.83□□□□□ -0.84
CTSD-201ENST00000236671 LCE6AA0A183 80 aa9.82□□□□□ -0.84
CTSD-201ENST00000236671 LINC00476Q8WZB0 136 aa9.82□□□□□ -0.84
CTSD-201ENST00000236671 K7EQZ3 153 aa9.81□□□□□ -0.84
CTSD-201ENST00000236671 WWC2-AS2Q96NR7 200 aa9.8□□□□□ -0.84
CTSD-201ENST00000236671 A0A096LNI7 61 aa9.79□□□□□ -0.84
CTSD-201ENST00000236671 SACSQ9NZJ4 4579 aa9.78□□□□□ -0.84
CTSD-201ENST00000236671 A0A0G2JQZ4 141 aa9.78□□□□□ -0.84
CTSD-201ENST00000236671 A0A1W2PNN7 141 aa9.78□□□□□ -0.84
CTSD-201ENST00000236671 KRTAP1-5Q9BYS1 174 aa9.78□□□□□ -0.84
CTSD-201ENST00000236671 LINC00474Q9P2X8 69 aa9.78□□□□□ -0.84
CTSD-201ENST00000236671 PRLHP81277 87 aa9.77□□□□□ -0.84
CTSD-201ENST00000236671 IGFL1Q6UW32 110 aa9.77□□□□□ -0.84
CTSD-201ENST00000236671 C16orf90A8MZG2 172 aa9.77□□□□□ -0.85
CTSD-201ENST00000236671 IGKV2-24A0A0C4DH68 120 aa9.76□□□□□ -0.85
CTSD-201ENST00000236671 CNBPP62633 177 aaKnown RBP9.76□□□□□ -0.85
CTSD-201ENST00000236671 FAM229BQ4G0N7 80 aa9.75□□□□□ -0.85
CTSD-201ENST00000236671 IGLV8-61A0A075B6I0 122 aa9.74□□□□□ -0.85
CTSD-201ENST00000236671 PSCAO43653 123 aa9.74□□□□□ -0.85
CTSD-201ENST00000236671 HCG22E2RYF7 251 aa9.73□□□□□ -0.85
CTSD-201ENST00000236671 ZCCHC13Q8WW36 166 aaKnown RBP9.73□□□□□ -0.85
CTSD-201ENST00000236671 VPS13DQ5THJ4 4388 aa9.73□□□□□ -0.85
CTSD-201ENST00000236671 RYR3Q15413 4870 aa9.73□□□□□ -0.85
CTSD-201ENST00000236671 LINC00336Q6ZUF6 198 aa9.71□□□□□ -0.85
CTSD-201ENST00000236671 FRAS1Q86XX4 4008 aa9.71□□□□□ -0.86
CTSD-201ENST00000236671 A0A087WSZ3 146 aa9.7□□□□□ -0.86
CTSD-201ENST00000236671 DEFB116Q30KQ4 102 aa9.69□□□□□ -0.86
CTSD-201ENST00000236671 KRTAP11-1Q8IUC1 163 aa9.68□□□□□ -0.86
CTSD-201ENST00000236671 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.67□□□□□ -0.86
CTSD-201ENST00000236671 UBE2AP49459 152 aa9.67□□□□□ -0.86
CTSD-201ENST00000236671 CHTF8P0CG12 524 aa9.66□□□□□ -0.86
CTSD-201ENST00000236671 PHF5AQ7RTV0 110 aaKnown RBP9.66□□□□□ -0.86
CTSD-201ENST00000236671 DNAH2Q9P225 4427 aa9.66□□□□□ -0.86
CTSD-201ENST00000236671 NUPR2A6NF83 97 aa9.65□□□□□ -0.86
CTSD-201ENST00000236671 ALMS1Q8TCU4 4167 aa9.65□□□□□ -0.87
CTSD-201ENST00000236671 RYR2Q92736 4967 aa9.65□□□□□ -0.87
CTSD-201ENST00000236671 SRRM2Q9UQ35 2752 aaKnown RBP9.64□□□□□ -0.87
CTSD-201ENST00000236671 hDV103S1A0JD37 113 aa9.64□□□□□ -0.87
CTSD-201ENST00000236671 SPRR1BP22528 89 aa9.64□□□□□ -0.87
CTSD-201ENST00000236671 MPLKIPQ8TAP9 179 aa9.64□□□□□ -0.87
CTSD-201ENST00000236671 PRO0628Q9UI54 55 aa9.64□□□□□ -0.87
CTSD-201ENST00000236671 APLNQ9ULZ1 77 aa9.64□□□□□ -0.87
CTSD-201ENST00000236671 H0Y9J4 135 aa9.63□□□□□ -0.87
CTSD-201ENST00000236671 WFDC13Q8IUB5 93 aa9.63□□□□□ -0.87
CTSD-201ENST00000236671 RPL37AP61513 92 aaKnown RBP9.62□□□□□ -0.87
CTSD-201ENST00000236671 C14orf177Q52M58 125 aa9.62□□□□□ -0.87
CTSD-201ENST00000236671 UBE2DNLQ8IWF7 75 aa9.62□□□□□ -0.87
CTSD-201ENST00000236671 KRTAP29-1A8MX34 341 aaPredicted RBP9.61□□□□□ -0.87
CTSD-201ENST00000236671 C1orf64Q8NEQ6 169 aa9.59□□□□□ -0.87
CTSD-201ENST00000236671 LY6G6CO95867 125 aa9.57□□□□□ -0.88
CTSD-201ENST00000236671 C9orf163Q8N9P6 203 aa9.56□□□□□ -0.88
CTSD-201ENST00000236671 LINC00472Q9H8W2 130 aa9.56□□□□□ -0.88
CTSD-201ENST00000236671 PRR15Q8IV56 129 aa9.56□□□□□ -0.88
CTSD-201ENST00000236671 CYP4F30PQ9H0H9 118 aa9.56□□□□□ -0.88
CTSD-201ENST00000236671 LRCOL1A6NCL2 159 aa9.55□□□□□ -0.88
CTSD-201ENST00000236671 MP68P56378 58 aa9.55□□□□□ -0.88
CTSD-201ENST00000236671 A8MWP4 228 aa9.54□□□□□ -0.88
CTSD-201ENST00000236671 NDUFB1O75438 58 aa9.54□□□□□ -0.88
CTSD-201ENST00000236671 CASC2Q6XLA1 102 aa9.54□□□□□ -0.88
CTSD-201ENST00000236671 TRAV22A0A0B4J277 110 aa9.53□□□□□ -0.88
CTSD-201ENST00000236671 KRTAP13-1Q8IUC0 172 aa9.53□□□□□ -0.88
CTSD-201ENST00000236671 DNAH6Q9C0G6 4158 aa9.52□□□□□ -0.89
CTSD-201ENST00000236671 PANO1I0J062 215 aa9.52□□□□□ -0.89
CTSD-201ENST00000236671 PRR4Q16378 134 aa9.52□□□□□ -0.89
CTSD-201ENST00000236671 BRK1Q8WUW1 75 aa9.52□□□□□ -0.89
CTSD-201ENST00000236671 LINC00208Q96KT6 92 aa9.51□□□□□ -0.89
CTSD-201ENST00000236671 PKIGQ9Y2B9 76 aa9.5□□□□□ -0.89
CTSD-201ENST00000236671 H0Y9P7 68 aa9.49□□□□□ -0.89
CTSD-201ENST00000236671 Q1T7F1 81 aa9.49□□□□□ -0.89
CTSD-201ENST00000236671 NBDYA0A0U1RRE5 68 aa9.49□□□□□ -0.89
CTSD-201ENST00000236671 FAT2Q9NYQ8 4349 aa9.48□□□□□ -0.89
CTSD-201ENST00000236671 Q6ZRN7 208 aaPredicted RBP9.48□□□□□ -0.89
CTSD-201ENST00000236671 H3BPC8 53 aa9.47□□□□□ -0.89
CTSD-201ENST00000236671 PKHD1P08F94 4074 aa9.45□□□□□ -0.9
CTSD-201ENST00000236671 MMP24-AS1A0A0U1RRL7 71 aa9.45□□□□□ -0.9
CTSD-201ENST00000236671 SPANXA2-OT1Q8N9U9 137 aa9.43□□□□□ -0.9
CTSD-201ENST00000236671 SPACA4Q8TDM5 124 aa9.43□□□□□ -0.9
CTSD-201ENST00000236671 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.43□□□□□ -0.9
CTSD-201ENST00000236671 DNAH17Q9UFH2 4485 aa9.42□□□□□ -0.9
CTSD-201ENST00000236671 Q96NJ1 140 aa9.42□□□□□ -0.9
CTSD-201ENST00000236671 PKD1P98161 4303 aa9.4□□□□□ -0.9
CTSD-201ENST00000236671 IGLV9-49A0A0B4J1Y8 123 aa9.4□□□□□ -0.9
CTSD-201ENST00000236671 HECTD4Q9Y4D8 3996 aa9.39□□□□□ -0.91
CTSD-201ENST00000236671 LINC00483Q53H64 154 aa9.38□□□□□ -0.91
CTSD-201ENST00000236671 EPPK1P58107 5090 aaKnown RBP9.38□□□□□ -0.91
CTSD-201ENST00000236671 ASB16-AS1Q495Z4 193 aa9.37□□□□□ -0.91
CTSD-201ENST00000236671 DNAH11Q96DT5 4516 aa9.37□□□□□ -0.91
CTSD-201ENST00000236671 DNAH8Q96JB1 4490 aa9.36□□□□□ -0.91
CTSD-201ENST00000236671 PSPHP1O15172 72 aa9.36□□□□□ -0.91
CTSD-201ENST00000236671 MOBPQ13875 183 aa9.34□□□□□ -0.91
CTSD-201ENST00000236671 Q6ZR54 194 aa9.34□□□□□ -0.91
CTSD-201ENST00000236671 A0A087WTM6 91 aa9.33□□□□□ -0.92
CTSD-201ENST00000236671 V9GYY9 64 aa9.32□□□□□ -0.92
CTSD-201ENST00000236671 C8orf17Q9NRJ1 99 aa9.31□□□□□ -0.92
CTSD-201ENST00000236671 ZNF706Q9Y5V0 76 aaPredicted RBP9.31□□□□□ -0.92
CTSD-201ENST00000236671 TP53AIP1Q9HCN2 124 aa9.3□□□□□ -0.92
CTSD-201ENST00000236671 PSORS1C2Q9UIG4 136 aa9.3□□□□□ -0.92
CTSD-201ENST00000236671 DNAH5Q8TE73 4624 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms