RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 NF1P21359 2839 aa11.08□□□□□ -0.64
SLC1A4-201ENST00000234256 IGLV8-61A0A075B6I0 122 aa11.08□□□□□ -0.64
SLC1A4-201ENST00000234256 C7orf65Q6ZTY9 151 aa11.08□□□□□ -0.64
SLC1A4-201ENST00000234256 LINC00313P59037 77 aa11.07□□□□□ -0.64
SLC1A4-201ENST00000234256 A0A1B0GU69 56 aa11.06□□□□□ -0.64
SLC1A4-201ENST00000234256 C9orf163Q8N9P6 203 aa11.06□□□□□ -0.64
SLC1A4-201ENST00000234256 PRR15Q8IV56 129 aa11.06□□□□□ -0.64
SLC1A4-201ENST00000234256 DCHS2Q6V1P9 2916 aa11.06□□□□□ -0.64
SLC1A4-201ENST00000234256 ACYP2P14621 99 aa11.05□□□□□ -0.64
SLC1A4-201ENST00000234256 H3BPC8 53 aa11.05□□□□□ -0.64
SLC1A4-201ENST00000234256 TYMSOSQ8TAI1 123 aa11.04□□□□□ -0.64
SLC1A4-201ENST00000234256 Q8NDZ9 215 aa11.04□□□□□ -0.64
SLC1A4-201ENST00000234256 RELNP78509 3460 aa11.03□□□□□ -0.64
SLC1A4-201ENST00000234256 DMDP11532 3685 aa11.03□□□□□ -0.64
SLC1A4-201ENST00000234256 TLX1NBP0CAT3 122 aa11.03□□□□□ -0.64
SLC1A4-201ENST00000234256 MRPL34Q9BQ48 92 aaKnown RBP11.02□□□□□ -0.65
SLC1A4-201ENST00000234256 NIPBLQ6KC79 2804 aaeCLIP11.01□□□□□ -0.65
SLC1A4-201ENST00000234256 KMT2BQ9UMN6 2715 aaPredicted RBP11.01□□□□□ -0.65
SLC1A4-201ENST00000234256 LINC00336Q6ZUF6 198 aa11□□□□□ -0.65
SLC1A4-201ENST00000234256 CRYBG3Q68DQ2 2970 aa10.99□□□□□ -0.65
SLC1A4-201ENST00000234256 LINC01600Q96MT4 127 aa10.99□□□□□ -0.65
SLC1A4-201ENST00000234256 PLA2G1BP04054 148 aaKnown RBP10.98□□□□□ -0.65
SLC1A4-201ENST00000234256 FBN2P35556 2912 aa10.98□□□□□ -0.65
SLC1A4-201ENST00000234256 APCP25054 2843 aa10.98□□□□□ -0.65
SLC1A4-201ENST00000234256 A0A087WTM6 91 aa10.97□□□□□ -0.65
SLC1A4-201ENST00000234256 COA5Q86WW8 74 aa10.97□□□□□ -0.65
SLC1A4-201ENST00000234256 C8orf17Q9NRJ1 99 aa10.97□□□□□ -0.65
SLC1A4-201ENST00000234256 Q96NJ1 140 aa10.96□□□□□ -0.65
SLC1A4-201ENST00000234256 ZNF861PO60384 105 aa10.96□□□□□ -0.66
SLC1A4-201ENST00000234256 PLA2G2DQ9UNK4 145 aa10.96□□□□□ -0.66
SLC1A4-201ENST00000234256 DSCR10P59022 87 aa10.95□□□□□ -0.66
SLC1A4-201ENST00000234256 IGLV5-48A0A075B6I7 105 aa10.94□□□□□ -0.66
SLC1A4-201ENST00000234256 ATP11AUNQ6ZP68 121 aa10.94□□□□□ -0.66
SLC1A4-201ENST00000234256 PSORS1C2Q9UIG4 136 aa10.93□□□□□ -0.66
SLC1A4-201ENST00000234256 LOC101927531A0A1B0GV80 90 aa10.92□□□□□ -0.66
SLC1A4-201ENST00000234256 FAM229AH3BQW9 127 aa10.9□□□□□ -0.66
SLC1A4-201ENST00000234256 DMBT1Q9UGM3 2413 aaPredicted RBP10.9□□□□□ -0.66
SLC1A4-201ENST00000234256 A0A1B0GVX0 72 aa10.9□□□□□ -0.67
SLC1A4-201ENST00000234256 WWC2-AS2Q96NR7 200 aa10.89□□□□□ -0.67
SLC1A4-201ENST00000234256 APLNQ9ULZ1 77 aa10.89□□□□□ -0.67
SLC1A4-201ENST00000234256 SMR3BP02814 79 aaPredicted RBP10.87□□□□□ -0.67
SLC1A4-201ENST00000234256 CNBPP62633 177 aaKnown RBP10.87□□□□□ -0.67
SLC1A4-201ENST00000234256 CYSTM1Q9H1C7 97 aa10.86□□□□□ -0.67
SLC1A4-201ENST00000234256 TENM4Q6N022 2769 aa10.85□□□□□ -0.67
SLC1A4-201ENST00000234256 SPRR4Q96PI1 79 aa10.85□□□□□ -0.67
SLC1A4-201ENST00000234256 OCR1Q9BZK8 76 aa10.85□□□□□ -0.67
SLC1A4-201ENST00000234256 ZFHX4Q86UP3 3567 aa10.84□□□□□ -0.67
SLC1A4-201ENST00000234256 SSBP3-AS1Q7Z2R9 100 aa10.83□□□□□ -0.68
SLC1A4-201ENST00000234256 C8orf87E5RJ46 101 aa10.82□□□□□ -0.68
SLC1A4-201ENST00000234256 IGLV5-37A0A075B6J1 123 aa10.79□□□□□ -0.68
SLC1A4-201ENST00000234256 IGLV7-43P04211 117 aa10.79□□□□□ -0.68
SLC1A4-201ENST00000234256 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.77□□□□□ -0.68
SLC1A4-201ENST00000234256 C9orf92A6NGG3 77 aa10.76□□□□□ -0.69
SLC1A4-201ENST00000234256 WIPF1O43516 503 aa10.73□□□□□ -0.69
SLC1A4-201ENST00000234256 PRR26Q8N8Z3 221 aa10.73□□□□□ -0.69
SLC1A4-201ENST00000234256 CYP4F30PQ9H0H9 118 aa10.72□□□□□ -0.69
SLC1A4-201ENST00000234256 TNP2Q05952 138 aa10.72□□□□□ -0.69
SLC1A4-201ENST00000234256 HRNRQ86YZ3 2850 aaPredicted RBP10.72□□□□□ -0.69
SLC1A4-201ENST00000234256 LINC00304Q8N9R0 145 aa10.7□□□□□ -0.7
SLC1A4-201ENST00000234256 UQCR11O14957 56 aa10.68□□□□□ -0.7
SLC1A4-201ENST00000234256 KRTAP1-5Q9BYS1 174 aa10.67□□□□□ -0.7
SLC1A4-201ENST00000234256 SPRR1AP35321 89 aa10.65□□□□□ -0.7
SLC1A4-201ENST00000234256 Q8N1X5 172 aa10.64□□□□□ -0.71
SLC1A4-201ENST00000234256 KRTAP26-1Q6PEX3 210 aa10.63□□□□□ -0.71
SLC1A4-201ENST00000234256 SPANXA2-OT1Q8N9U9 137 aa10.61□□□□□ -0.71
SLC1A4-201ENST00000234256 MXRA5Q9NR99 2828 aa10.59□□□□□ -0.71
SLC1A4-201ENST00000234256 MIR22HGQ0VDD5 57 aa10.59□□□□□ -0.71
SLC1A4-201ENST00000234256 FAM229BQ4G0N7 80 aa10.58□□□□□ -0.72
SLC1A4-201ENST00000234256 CUBNO60494 3623 aa10.58□□□□□ -0.72
SLC1A4-201ENST00000234256 TENM3Q9P273 2699 aa10.57□□□□□ -0.72
SLC1A4-201ENST00000234256 FP248Q71RG6 208 aaPredicted RBP10.55□□□□□ -0.72
SLC1A4-201ENST00000234256 MMP24-AS1A0A0U1RRL7 71 aa10.52□□□□□ -0.72
SLC1A4-201ENST00000234256 Q5XG85 94 aa10.52□□□□□ -0.73
SLC1A4-201ENST00000234256 CELSR1Q9NYQ6 3014 aa10.51□□□□□ -0.73
SLC1A4-201ENST00000234256 SMG1Q96Q15 3661 aaKnown RBP10.5□□□□□ -0.73
SLC1A4-201ENST00000234256 Q8N9P0 234 aaPredicted RBP10.5□□□□□ -0.73
SLC1A4-201ENST00000234256 OXTP01178 125 aa10.5□□□□□ -0.73
SLC1A4-201ENST00000234256 LINC00472Q9H8W2 130 aa10.47□□□□□ -0.73
SLC1A4-201ENST00000234256 IGLV7-46A0A075B6I9 117 aa10.47□□□□□ -0.73
SLC1A4-201ENST00000234256 HRES1P13985 223 aa10.46□□□□□ -0.74
SLC1A4-201ENST00000234256 Q1T7F1 81 aa10.46□□□□□ -0.74
SLC1A4-201ENST00000234256 PANO1I0J062 215 aa10.42□□□□□ -0.74
SLC1A4-201ENST00000234256 SPRR1BP22528 89 aa10.4□□□□□ -0.74
SLC1A4-201ENST00000234256 CDC42SE1Q9NRR8 79 aa10.4□□□□□ -0.74
SLC1A4-201ENST00000234256 KTN1-AS1Q86SY8 53 aa10.4□□□□□ -0.74
SLC1A4-201ENST00000234256 PLAC8Q9NZF1 115 aa10.4□□□□□ -0.74
SLC1A4-201ENST00000234256 CD164Q04900 197 aa10.4□□□□□ -0.75
SLC1A4-201ENST00000234256 A0A0D9SG42 100 aa10.39□□□□□ -0.75
SLC1A4-201ENST00000234256 KRTAP4-16G5E9R7 235 aaPredicted RBP10.37□□□□□ -0.75
SLC1A4-201ENST00000234256 PKD1L1Q8TDX9 2849 aa10.37□□□□□ -0.75
SLC1A4-201ENST00000234256 SPINT4Q6UDR6 99 aa10.37□□□□□ -0.75
SLC1A4-201ENST00000234256 J3QL48 77 aa10.35□□□□□ -0.75
SLC1A4-201ENST00000234256 SVEP1Q4LDE5 3571 aa10.34□□□□□ -0.75
SLC1A4-201ENST00000234256 CSMD1Q96PZ7 3565 aa10.33□□□□□ -0.76
SLC1A4-201ENST00000234256 LINC01554Q52M75 96 aa10.31□□□□□ -0.76
SLC1A4-201ENST00000234256 TENM1Q9UKZ4 2725 aa10.31□□□□□ -0.76
SLC1A4-201ENST00000234256 COX6B2Q6YFQ2 88 aa10.29□□□□□ -0.76
SLC1A4-201ENST00000234256 LCA10Q71F78 164 aa10.27□□□□□ -0.77
SLC1A4-201ENST00000234256 Q5W150 140 aa10.26□□□□□ -0.77
SLC1A4-201ENST00000234256 KRTAP10-2P60368 255 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms