RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 SPINK7P58062 85 aa8.67□□□□□ -1.02
HCFC2-201ENST00000229330 VPS13AQ96RL7 3174 aa8.67□□□□□ -1.02
HCFC2-201ENST00000229330 HRES1P13985 223 aa8.67□□□□□ -1.02
HCFC2-201ENST00000229330 SPRR1AP35321 89 aa8.64□□□□□ -1.03
HCFC2-201ENST00000229330 PLA2G1BP04054 148 aaKnown RBP8.64□□□□□ -1.03
HCFC2-201ENST00000229330 Q8N1X5 172 aa8.63□□□□□ -1.03
HCFC2-201ENST00000229330 SZT2Q5T011 3432 aa8.63□□□□□ -1.03
HCFC2-201ENST00000229330 PSORS1C2Q9UIG4 136 aa8.63□□□□□ -1.03
HCFC2-201ENST00000229330 IGLV7-43P04211 117 aa8.59□□□□□ -1.03
HCFC2-201ENST00000229330 LINC00472Q9H8W2 130 aa8.58□□□□□ -1.04
HCFC2-201ENST00000229330 CSAG1Q6PB30 78 aa8.58□□□□□ -1.04
HCFC2-201ENST00000229330 A0A087WTM6 91 aa8.57□□□□□ -1.04
HCFC2-201ENST00000229330 IGSF10Q6WRI0 2623 aa8.55□□□□□ -1.04
HCFC2-201ENST00000229330 ZCCHC13Q8WW36 166 aaKnown RBP8.54□□□□□ -1.04
HCFC2-201ENST00000229330 TEP1Q99973 2627 aaKnown RBP8.54□□□□□ -1.04
HCFC2-201ENST00000229330 MAP1AP78559 2803 aaPredicted RBP8.54□□□□□ -1.04
HCFC2-201ENST00000229330 A0A1B0GU33 70 aa8.54□□□□□ -1.04
HCFC2-201ENST00000229330 LINC00304Q8N9R0 145 aa8.53□□□□□ -1.04
HCFC2-201ENST00000229330 A0A0D9SG42 100 aa8.53□□□□□ -1.04
HCFC2-201ENST00000229330 LAMA1P25391 3075 aa8.53□□□□□ -1.04
HCFC2-201ENST00000229330 C9orf92A6NGG3 77 aa8.52□□□□□ -1.05
HCFC2-201ENST00000229330 TNP2Q05952 138 aa8.52□□□□□ -1.05
HCFC2-201ENST00000229330 CHD6Q8TD26 2715 aa8.51□□□□□ -1.05
HCFC2-201ENST00000229330 SPRR1BP22528 89 aa8.5□□□□□ -1.05
HCFC2-201ENST00000229330 VCANP13611 3396 aa8.49□□□□□ -1.05
HCFC2-201ENST00000229330 CELSR3Q9NYQ7 3312 aa8.49□□□□□ -1.05
HCFC2-201ENST00000229330 TEX15Q9BXT5 2789 aa8.48□□□□□ -1.05
HCFC2-201ENST00000229330 FRYQ5TBA9 3013 aa8.48□□□□□ -1.05
HCFC2-201ENST00000229330 UNC79Q9P2D8 2635 aa8.47□□□□□ -1.05
HCFC2-201ENST00000229330 Q5W150 140 aa8.44□□□□□ -1.06
HCFC2-201ENST00000229330 KRTAP29-1A8MX34 341 aaPredicted RBP8.44□□□□□ -1.06
HCFC2-201ENST00000229330 ASB16-AS1Q495Z4 193 aa8.44□□□□□ -1.06
HCFC2-201ENST00000229330 DNAH14Q0VDD8 3507 aa8.44□□□□□ -1.06
HCFC2-201ENST00000229330 KRTAP26-1Q6PEX3 210 aa8.43□□□□□ -1.06
HCFC2-201ENST00000229330 A6NN06 94 aa8.42□□□□□ -1.06
HCFC2-201ENST00000229330 COL6A5A8TX70 2615 aa8.4□□□□□ -1.06
HCFC2-201ENST00000229330 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.4□□□□□ -1.07
HCFC2-201ENST00000229330 LCE6AA0A183 80 aa8.39□□□□□ -1.07
HCFC2-201ENST00000229330 Q6ZR54 194 aa8.39□□□□□ -1.07
HCFC2-201ENST00000229330 STAB1Q9NY15 2570 aa8.38□□□□□ -1.07
HCFC2-201ENST00000229330 KRTAP4-16G5E9R7 235 aaPredicted RBP8.38□□□□□ -1.07
HCFC2-201ENST00000229330 SMR3BP02814 79 aaPredicted RBP8.38□□□□□ -1.07
HCFC2-201ENST00000229330 DMAC1Q96GE9 116 aa8.37□□□□□ -1.07
HCFC2-201ENST00000229330 GCN1Q92616 2671 aaKnown RBP8.36□□□□□ -1.07
HCFC2-201ENST00000229330 LUZP6Q538Z0 58 aa8.35□□□□□ -1.07
HCFC2-201ENST00000229330 COL6A3P12111 3177 aa8.34□□□□□ -1.07
HCFC2-201ENST00000229330 NOTCH1P46531 2555 aa8.33□□□□□ -1.08
HCFC2-201ENST00000229330 SETXQ7Z333 2677 aaKnown RBP8.33□□□□□ -1.08
HCFC2-201ENST00000229330 FRYLO94915 3013 aa8.32□□□□□ -1.08
HCFC2-201ENST00000229330 ATMQ13315 3056 aa8.32□□□□□ -1.08
HCFC2-201ENST00000229330 FLNCQ14315 2725 aa8.32□□□□□ -1.08
HCFC2-201ENST00000229330 BOD1L1Q8NFC6 3051 aa8.3□□□□□ -1.08
HCFC2-201ENST00000229330 A8MU10 97 aa8.29□□□□□ -1.08
HCFC2-201ENST00000229330 SPATA8Q6RVD6 105 aa8.29□□□□□ -1.08
HCFC2-201ENST00000229330 UBR5O95071 2799 aaPredicted RBP8.29□□□□□ -1.08
HCFC2-201ENST00000229330 DMXL2Q8TDJ6 3036 aa8.27□□□□□ -1.09
HCFC2-201ENST00000229330 TNRC18O15417 2968 aaPredicted RBP8.26□□□□□ -1.09
HCFC2-201ENST00000229330 ADGRG4Q8IZF6 3080 aa8.26□□□□□ -1.09
HCFC2-201ENST00000229330 PLAC8Q9NZF1 115 aa8.26□□□□□ -1.09
HCFC2-201ENST00000229330 COL12A1Q99715 3063 aa8.25□□□□□ -1.09
HCFC2-201ENST00000229330 BAHCC1Q9P281 2608 aa8.24□□□□□ -1.09
HCFC2-201ENST00000229330 NBEAL2Q6ZNJ1 2754 aa8.24□□□□□ -1.09
HCFC2-201ENST00000229330 J3QL48 77 aa8.24□□□□□ -1.09
HCFC2-201ENST00000229330 NBEAQ8NFP9 2946 aa8.23□□□□□ -1.09
HCFC2-201ENST00000229330 ROMO1P60602 79 aa8.22□□□□□ -1.09
HCFC2-201ENST00000229330 KALRNO60229 2985 aa8.22□□□□□ -1.09
HCFC2-201ENST00000229330 SPTBN5Q9NRC6 3674 aaKnown RBP8.21□□□□□ -1.09
HCFC2-201ENST00000229330 ITPR1Q14643 2758 aa8.2□□□□□ -1.1
HCFC2-201ENST00000229330 LINC00483Q53H64 154 aa8.2□□□□□ -1.1
HCFC2-201ENST00000229330 KRTAP1-5Q9BYS1 174 aa8.2□□□□□ -1.1
HCFC2-201ENST00000229330 H1FX-AS1Q4G0G2 97 aa8.19□□□□□ -1.1
HCFC2-201ENST00000229330 TACC2O95359 2948 aa8.18□□□□□ -1.1
HCFC2-201ENST00000229330 FREM2Q5SZK8 3169 aa8.18□□□□□ -1.1
HCFC2-201ENST00000229330 ADM2Q7Z4H4 148 aa8.18□□□□□ -1.1
HCFC2-201ENST00000229330 RPL37P61927 97 aaKnown RBP8.17□□□□□ -1.1
HCFC2-201ENST00000229330 LRBAP50851 2863 aa8.16□□□□□ -1.1
HCFC2-201ENST00000229330 NBEAL1Q6ZS30 2694 aa8.14□□□□□ -1.11
HCFC2-201ENST00000229330 EYSQ5T1H1 3165 aa8.14□□□□□ -1.11
HCFC2-201ENST00000229330 ITPR2Q14571 2701 aa8.13□□□□□ -1.11
HCFC2-201ENST00000229330 A0A0A0MQY5 61 aa8.13□□□□□ -1.11
HCFC2-201ENST00000229330 REV3LO60673 3130 aa8.13□□□□□ -1.11
HCFC2-201ENST00000229330 A0A087X002 238 aa8.12□□□□□ -1.11
HCFC2-201ENST00000229330 NOTCH2NLQ7Z3S9 236 aa8.12□□□□□ -1.11
HCFC2-201ENST00000229330 KRTAP25-1Q3LHN0 102 aa8.12□□□□□ -1.11
HCFC2-201ENST00000229330 SPEGQ15772 3267 aa8.11□□□□□ -1.11
HCFC2-201ENST00000229330 UTP20O75691 2785 aaKnown RBP8.1□□□□□ -1.11
HCFC2-201ENST00000229330 S4R3F8 94 aa8.09□□□□□ -1.11
HCFC2-201ENST00000229330 COX6B2Q6YFQ2 88 aa8.08□□□□□ -1.12
HCFC2-201ENST00000229330 DMXL1Q9Y485 3027 aa8.07□□□□□ -1.12
HCFC2-201ENST00000229330 KRTAP7-1Q8IUC3 87 aa8.06□□□□□ -1.12
HCFC2-201ENST00000229330 ZZEF1O43149 2961 aa8.05□□□□□ -1.12
HCFC2-201ENST00000229330 NSD1Q96L73 2696 aaPredicted RBP8.04□□□□□ -1.12
HCFC2-201ENST00000229330 PANO1I0J062 215 aa8.04□□□□□ -1.12
HCFC2-201ENST00000229330 CAMK2N1Q7Z7J9 78 aa8.03□□□□□ -1.12
HCFC2-201ENST00000229330 KRTAP11-1Q8IUC1 163 aa8.01□□□□□ -1.13
HCFC2-201ENST00000229330 KRTAP16-1A8MUX0 517 aa8□□□□□ -1.13
HCFC2-201ENST00000229330 HIVEP1P15822 2718 aa8□□□□□ -1.13
HCFC2-201ENST00000229330 USP34Q70CQ2 3546 aa7.99□□□□□ -1.13
HCFC2-201ENST00000229330 APCP25054 2843 aa7.98□□□□□ -1.13
HCFC2-201ENST00000229330 Q6ZSA8 131 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms