RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 SVIPQ8NHG7 77 aa9.51□□□□□ -0.89
UBE2D4-201ENST00000222402 KRTAP1-5Q9BYS1 174 aa9.51□□□□□ -0.89
UBE2D4-201ENST00000222402 RPL37AP61513 92 aaKnown RBP9.5□□□□□ -0.89
UBE2D4-201ENST00000222402 LRCOL1A6NCL2 159 aa9.49□□□□□ -0.89
UBE2D4-201ENST00000222402 LINC00208Q96KT6 92 aa9.49□□□□□ -0.89
UBE2D4-201ENST00000222402 CNBPP62633 177 aaKnown RBP9.48□□□□□ -0.89
UBE2D4-201ENST00000222402 APLNQ9ULZ1 77 aa9.48□□□□□ -0.89
UBE2D4-201ENST00000222402 CASC2Q6XLA1 102 aa9.47□□□□□ -0.89
UBE2D4-201ENST00000222402 KRTAP4-16G5E9R7 235 aaPredicted RBP9.45□□□□□ -0.9
UBE2D4-201ENST00000222402 C9orf163Q8N9P6 203 aa9.45□□□□□ -0.9
UBE2D4-201ENST00000222402 OCR1Q9BZK8 76 aa9.44□□□□□ -0.9
UBE2D4-201ENST00000222402 SPRR4Q96PI1 79 aa9.43□□□□□ -0.9
UBE2D4-201ENST00000222402 KRTAP7-1Q8IUC3 87 aa9.42□□□□□ -0.9
UBE2D4-201ENST00000222402 BRK1Q8WUW1 75 aa9.42□□□□□ -0.9
UBE2D4-201ENST00000222402 DSCR10P59022 87 aa9.41□□□□□ -0.9
UBE2D4-201ENST00000222402 LY6G6CO95867 125 aa9.41□□□□□ -0.9
UBE2D4-201ENST00000222402 SPINK6Q6UWN8 80 aa9.41□□□□□ -0.9
UBE2D4-201ENST00000222402 ZNF706Q9Y5V0 76 aaPredicted RBP9.4□□□□□ -0.9
UBE2D4-201ENST00000222402 TNP2Q05952 138 aa9.39□□□□□ -0.91
UBE2D4-201ENST00000222402 OXTP01178 125 aa9.39□□□□□ -0.91
UBE2D4-201ENST00000222402 A0A0U1RQV1 116 aa9.39□□□□□ -0.91
UBE2D4-201ENST00000222402 H0Y9P7 68 aa9.39□□□□□ -0.91
UBE2D4-201ENST00000222402 IGLV5-52A0A0A0MRZ9 124 aa9.37□□□□□ -0.91
UBE2D4-201ENST00000222402 IGHV6-1A0A0B4J1U7 121 aa9.35□□□□□ -0.91
UBE2D4-201ENST00000222402 RTL8CO15255 209 aa9.34□□□□□ -0.91
UBE2D4-201ENST00000222402 MOBPQ13875 183 aa9.34□□□□□ -0.91
UBE2D4-201ENST00000222402 C1orf134Q5TEV5 83 aa9.32□□□□□ -0.92
UBE2D4-201ENST00000222402 A8MWP4 228 aa9.31□□□□□ -0.92
UBE2D4-201ENST00000222402 TENM2Q9NT68 2774 aa9.31□□□□□ -0.92
UBE2D4-201ENST00000222402 PRR15Q8IV56 129 aa9.31□□□□□ -0.92
UBE2D4-201ENST00000222402 A0A087WTM6 91 aa9.3□□□□□ -0.92
UBE2D4-201ENST00000222402 C1orf64Q8NEQ6 169 aa9.3□□□□□ -0.92
UBE2D4-201ENST00000222402 CIRBP-AS1Q8TBR5 109 aa9.3□□□□□ -0.92
UBE2D4-201ENST00000222402 PCOTHQ58A44 107 aa9.3□□□□□ -0.92
UBE2D4-201ENST00000222402 hDV103S1A0JD37 113 aa9.29□□□□□ -0.92
UBE2D4-201ENST00000222402 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.29□□□□□ -0.92
UBE2D4-201ENST00000222402 ANAPC11Q9NYG5 84 aa9.28□□□□□ -0.92
UBE2D4-201ENST00000222402 Q5XG85 94 aa9.26□□□□□ -0.93
UBE2D4-201ENST00000222402 KRTAP11-1Q8IUC1 163 aa9.26□□□□□ -0.93
UBE2D4-201ENST00000222402 PANO1I0J062 215 aa9.25□□□□□ -0.93
UBE2D4-201ENST00000222402 PSPHP1O15172 72 aa9.25□□□□□ -0.93
UBE2D4-201ENST00000222402 PSORS1C2Q9UIG4 136 aa9.24□□□□□ -0.93
UBE2D4-201ENST00000222402 IGLV8-61A0A075B6I0 122 aa9.23□□□□□ -0.93
UBE2D4-201ENST00000222402 TRAV22A0A0B4J277 110 aa9.23□□□□□ -0.93
UBE2D4-201ENST00000222402 LINC00336Q6ZUF6 198 aa9.21□□□□□ -0.94
UBE2D4-201ENST00000222402 SPRR1BP22528 89 aa9.19□□□□□ -0.94
UBE2D4-201ENST00000222402 FP248Q71RG6 208 aaPredicted RBP9.19□□□□□ -0.94
UBE2D4-201ENST00000222402 SPACA4Q8TDM5 124 aa9.19□□□□□ -0.94
UBE2D4-201ENST00000222402 ZNF861PO60384 105 aa9.18□□□□□ -0.94
UBE2D4-201ENST00000222402 FAM229BQ4G0N7 80 aa9.18□□□□□ -0.94
UBE2D4-201ENST00000222402 H3BPC8 53 aa9.17□□□□□ -0.94
UBE2D4-201ENST00000222402 PRO0628Q9UI54 55 aa9.17□□□□□ -0.94
UBE2D4-201ENST00000222402 V9GYY9 64 aa9.17□□□□□ -0.94
UBE2D4-201ENST00000222402 C4orf48Q5BLP8 95 aa9.15□□□□□ -0.94
UBE2D4-201ENST00000222402 LINC00472Q9H8W2 130 aa9.15□□□□□ -0.94
UBE2D4-201ENST00000222402 TP53AIP1Q9HCN2 124 aa9.15□□□□□ -0.95
UBE2D4-201ENST00000222402 C8orf17Q9NRJ1 99 aa9.14□□□□□ -0.95
UBE2D4-201ENST00000222402 CHKB-CPT1BH3BT56 60 aa9.11□□□□□ -0.95
UBE2D4-201ENST00000222402 A0A1B0GVX0 72 aa9.11□□□□□ -0.95
UBE2D4-201ENST00000222402 Q6ZRN7 208 aaPredicted RBP9.11□□□□□ -0.95
UBE2D4-201ENST00000222402 RETNLBQ9BQ08 111 aa9.11□□□□□ -0.95
UBE2D4-201ENST00000222402 PRR15LQ9BU68 103 aa9.1□□□□□ -0.95
UBE2D4-201ENST00000222402 MRPL34Q9BQ48 92 aaKnown RBP9.09□□□□□ -0.95
UBE2D4-201ENST00000222402 SRRM2Q9UQ35 2752 aaKnown RBP9.09□□□□□ -0.95
UBE2D4-201ENST00000222402 MMP24-AS1A0A0U1RRL7 71 aa9.08□□□□□ -0.96
UBE2D4-201ENST00000222402 IGLV7-43P04211 117 aa9.07□□□□□ -0.96
UBE2D4-201ENST00000222402 SPTSSBQ8NFR3 76 aa9.05□□□□□ -0.96
UBE2D4-201ENST00000222402 A8MUN3 132 aa9.05□□□□□ -0.96
UBE2D4-201ENST00000222402 TGP01266 2768 aa9.05□□□□□ -0.96
UBE2D4-201ENST00000222402 KRTAP29-1A8MX34 341 aaPredicted RBP9.05□□□□□ -0.96
UBE2D4-201ENST00000222402 A6NED7 52 aa9.04□□□□□ -0.96
UBE2D4-201ENST00000222402 ZCCHC13Q8WW36 166 aaKnown RBP9.04□□□□□ -0.96
UBE2D4-201ENST00000222402 PLAC8Q9NZF1 115 aa9.04□□□□□ -0.96
UBE2D4-201ENST00000222402 WWC2-AS2Q96NR7 200 aa9.03□□□□□ -0.96
UBE2D4-201ENST00000222402 CYP4F30PQ9H0H9 118 aa9.03□□□□□ -0.96
UBE2D4-201ENST00000222402 COA5Q86WW8 74 aa9.02□□□□□ -0.97
UBE2D4-201ENST00000222402 LCE6AA0A183 80 aa9.01□□□□□ -0.97
UBE2D4-201ENST00000222402 C1orf195Q5TG92 126 aa9.01□□□□□ -0.97
UBE2D4-201ENST00000222402 SPANXA2-OT1Q8N9U9 137 aa9□□□□□ -0.97
UBE2D4-201ENST00000222402 KRTAP13-1Q8IUC0 172 aa9□□□□□ -0.97
UBE2D4-201ENST00000222402 LIMD2Q9BT23 127 aa9□□□□□ -0.97
UBE2D4-201ENST00000222402 SPAG11AQ6PDA7 123 aa8.99□□□□□ -0.97
UBE2D4-201ENST00000222402 SSBP3-AS1Q7Z2R9 100 aa8.98□□□□□ -0.97
UBE2D4-201ENST00000222402 LINC00313P59037 77 aa8.97□□□□□ -0.97
UBE2D4-201ENST00000222402 Q6ZR54 194 aa8.97□□□□□ -0.97
UBE2D4-201ENST00000222402 LINC00483Q53H64 154 aa8.96□□□□□ -0.98
UBE2D4-201ENST00000222402 Q1T7F1 81 aa8.94□□□□□ -0.98
UBE2D4-201ENST00000222402 LOC101927531A0A1B0GV80 90 aa8.93□□□□□ -0.98
UBE2D4-201ENST00000222402 CSMD3Q7Z407 3707 aa8.92□□□□□ -0.98
UBE2D4-201ENST00000222402 HUWE1Q7Z6Z7 4374 aaKnown RBP8.92□□□□□ -0.98
UBE2D4-201ENST00000222402 IGKV2D-30A0A075B6S6 120 aa8.9□□□□□ -0.98
UBE2D4-201ENST00000222402 C8orf87E5RJ46 101 aa8.9□□□□□ -0.98
UBE2D4-201ENST00000222402 IGKV2-30P06310 120 aa8.9□□□□□ -0.98
UBE2D4-201ENST00000222402 PMAIP1Q13794 54 aa8.9□□□□□ -0.98
UBE2D4-201ENST00000222402 IGLV7-46A0A075B6I9 117 aa8.9□□□□□ -0.99
UBE2D4-201ENST00000222402 KRTAP10-2P60368 255 aa8.89□□□□□ -0.99
UBE2D4-201ENST00000222402 PLA2G1BP04054 148 aaKnown RBP8.88□□□□□ -0.99
UBE2D4-201ENST00000222402 CD164Q04900 197 aa8.88□□□□□ -0.99
UBE2D4-201ENST00000222402 A0A087X002 238 aa8.88□□□□□ -0.99
UBE2D4-201ENST00000222402 NOTCH2NLQ7Z3S9 236 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms