RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 F8WDY8 70 aa12.77□□□□□ -0.37
PPP1R3F-201ENST00000055335 LCE6AA0A183 80 aa12.76□□□□□ -0.37
PPP1R3F-201ENST00000055335 H3BNG1 76 aa12.76□□□□□ -0.37
PPP1R3F-201ENST00000055335 PMAIP1Q13794 54 aa12.76□□□□□ -0.37
PPP1R3F-201ENST00000055335 A0A1B0GW54 56 aa12.75□□□□□ -0.37
PPP1R3F-201ENST00000055335 KRTAP10-11P60412 298 aa12.75□□□□□ -0.37
PPP1R3F-201ENST00000055335 B9D2Q9BPU9 175 aa12.75□□□□□ -0.37
PPP1R3F-201ENST00000055335 SPRR1AP35321 89 aa12.74□□□□□ -0.37
PPP1R3F-201ENST00000055335 H0Y9P7 68 aa12.73□□□□□ -0.37
PPP1R3F-201ENST00000055335 CHKB-CPT1BH3BT56 60 aa12.72□□□□□ -0.37
PPP1R3F-201ENST00000055335 UBE2AP49459 152 aa12.72□□□□□ -0.37
PPP1R3F-201ENST00000055335 SPTSSBQ8NFR3 76 aa12.72□□□□□ -0.37
PPP1R3F-201ENST00000055335 NDUFB1O75438 58 aa12.72□□□□□ -0.37
PPP1R3F-201ENST00000055335 PRR15Q8IV56 129 aa12.71□□□□□ -0.37
PPP1R3F-201ENST00000055335 CASC2Q6XLA1 102 aa12.7□□□□□ -0.38
PPP1R3F-201ENST00000055335 LINC00588Q9Y4M8 146 aa12.7□□□□□ -0.38
PPP1R3F-201ENST00000055335 H0Y9J4 135 aa12.69□□□□□ -0.38
PPP1R3F-201ENST00000055335 TLX1NBP0CAT3 122 aa12.69□□□□□ -0.38
PPP1R3F-201ENST00000055335 DNAH10OSP0CZ25 163 aa12.68□□□□□ -0.38
PPP1R3F-201ENST00000055335 PRR15LQ9BU68 103 aa12.68□□□□□ -0.38
PPP1R3F-201ENST00000055335 PLA2G2DQ9UNK4 145 aa12.66□□□□□ -0.38
PPP1R3F-201ENST00000055335 CYP4F30PQ9H0H9 118 aa12.66□□□□□ -0.38
PPP1R3F-201ENST00000055335 COL7A1Q02388 2944 aa12.66□□□□□ -0.38
PPP1R3F-201ENST00000055335 ANK2Q01484 3957 aa12.66□□□□□ -0.38
PPP1R3F-201ENST00000055335 PCOTHQ58A44 107 aa12.63□□□□□ -0.39
PPP1R3F-201ENST00000055335 J3QKU1 62 aa12.63□□□□□ -0.39
PPP1R3F-201ENST00000055335 IGLV5-37A0A075B6J1 123 aa12.62□□□□□ -0.39
PPP1R3F-201ENST00000055335 CHTF8P0CG12 524 aa12.61□□□□□ -0.39
PPP1R3F-201ENST00000055335 Q5VV11 94 aa12.6□□□□□ -0.39
PPP1R3F-201ENST00000055335 KMT2BQ9UMN6 2715 aaPredicted RBP12.6□□□□□ -0.39
PPP1R3F-201ENST00000055335 PHF5AQ7RTV0 110 aaKnown RBP12.57□□□□□ -0.4
PPP1R3F-201ENST00000055335 CNBPP62633 177 aaKnown RBP12.56□□□□□ -0.4
PPP1R3F-201ENST00000055335 TENM2Q9NT68 2774 aa12.56□□□□□ -0.4
PPP1R3F-201ENST00000055335 A6NED7 52 aa12.56□□□□□ -0.4
PPP1R3F-201ENST00000055335 Q8N9P0 234 aaPredicted RBP12.55□□□□□ -0.4
PPP1R3F-201ENST00000055335 MGAM2Q2M2H8 2515 aa12.54□□□□□ -0.4
PPP1R3F-201ENST00000055335 STAB2Q8WWQ8 2551 aa12.52□□□□□ -0.4
PPP1R3F-201ENST00000055335 KRTAP29-1A8MX34 341 aaPredicted RBP12.52□□□□□ -0.4
PPP1R3F-201ENST00000055335 NDUFS5O43920 106 aa12.52□□□□□ -0.4
PPP1R3F-201ENST00000055335 KRTAP11-1Q8IUC1 163 aa12.51□□□□□ -0.41
PPP1R3F-201ENST00000055335 A8MWP4 228 aa12.49□□□□□ -0.41
PPP1R3F-201ENST00000055335 COA5Q86WW8 74 aa12.49□□□□□ -0.41
PPP1R3F-201ENST00000055335 C16orf90A8MZG2 172 aa12.48□□□□□ -0.41
PPP1R3F-201ENST00000055335 IGLV9-49A0A0B4J1Y8 123 aa12.48□□□□□ -0.41
PPP1R3F-201ENST00000055335 SPAG11AQ6PDA7 123 aa12.47□□□□□ -0.41
PPP1R3F-201ENST00000055335 LIMD2Q9BT23 127 aa12.47□□□□□ -0.41
PPP1R3F-201ENST00000055335 DNAH10Q8IVF4 4471 aa12.44□□□□□ -0.42
PPP1R3F-201ENST00000055335 SPANXA2-OT1Q8N9U9 137 aa12.42□□□□□ -0.42
PPP1R3F-201ENST00000055335 LINC00472Q9H8W2 130 aa12.42□□□□□ -0.42
PPP1R3F-201ENST00000055335 KRTAP1-5Q9BYS1 174 aa12.42□□□□□ -0.42
PPP1R3F-201ENST00000055335 IGLV8-61A0A075B6I0 122 aa12.39□□□□□ -0.43
PPP1R3F-201ENST00000055335 LCA10Q71F78 164 aa12.39□□□□□ -0.43
PPP1R3F-201ENST00000055335 UBE2DNLQ8IWF7 75 aa12.39□□□□□ -0.43
PPP1R3F-201ENST00000055335 IGHV6-1A0A0B4J1U7 121 aa12.37□□□□□ -0.43
PPP1R3F-201ENST00000055335 C9orf163Q8N9P6 203 aa12.37□□□□□ -0.43
PPP1R3F-201ENST00000055335 H3BPC8 53 aa12.37□□□□□ -0.43
PPP1R3F-201ENST00000055335 MMP24-AS1A0A0U1RRL7 71 aa12.36□□□□□ -0.43
PPP1R3F-201ENST00000055335 LYSTQ99698 3801 aa12.36□□□□□ -0.43
PPP1R3F-201ENST00000055335 CD164Q04900 197 aa12.33□□□□□ -0.44
PPP1R3F-201ENST00000055335 IGLV7-46A0A075B6I9 117 aa12.3□□□□□ -0.44
PPP1R3F-201ENST00000055335 KRTAP24-1Q3LI83 254 aa12.28□□□□□ -0.44
PPP1R3F-201ENST00000055335 CDK2AP2O75956 126 aa12.28□□□□□ -0.44
PPP1R3F-201ENST00000055335 ANAPC11Q9NYG5 84 aa12.28□□□□□ -0.44
PPP1R3F-201ENST00000055335 LOC101927531A0A1B0GV80 90 aa12.27□□□□□ -0.45
PPP1R3F-201ENST00000055335 KTN1-AS1Q86SY8 53 aa12.27□□□□□ -0.45
PPP1R3F-201ENST00000055335 SPINK6Q6UWN8 80 aa12.26□□□□□ -0.45
PPP1R3F-201ENST00000055335 Q75L30 129 aa12.26□□□□□ -0.45
PPP1R3F-201ENST00000055335 PANO1I0J062 215 aa12.25□□□□□ -0.45
PPP1R3F-201ENST00000055335 ATP11AUNQ6ZP68 121 aa12.24□□□□□ -0.45
PPP1R3F-201ENST00000055335 C8orf17Q9NRJ1 99 aa12.23□□□□□ -0.45
PPP1R3F-201ENST00000055335 RBM12B-AS1Q9P1G2 102 aa12.22□□□□□ -0.45
PPP1R3F-201ENST00000055335 SPINK7P58062 85 aa12.21□□□□□ -0.45
PPP1R3F-201ENST00000055335 K7EIL1 84 aa12.21□□□□□ -0.46
PPP1R3F-201ENST00000055335 SPRR1BP22528 89 aa12.2□□□□□ -0.46
PPP1R3F-201ENST00000055335 PRR26Q8N8Z3 221 aa12.19□□□□□ -0.46
PPP1R3F-201ENST00000055335 A0A087X002 238 aa12.18□□□□□ -0.46
PPP1R3F-201ENST00000055335 NOTCH2NLQ7Z3S9 236 aa12.18□□□□□ -0.46
PPP1R3F-201ENST00000055335 MOBPQ13875 183 aa12.18□□□□□ -0.46
PPP1R3F-201ENST00000055335 HRES1P13985 223 aa12.17□□□□□ -0.46
PPP1R3F-201ENST00000055335 CDC42SE1Q9NRR8 79 aa12.17□□□□□ -0.46
PPP1R3F-201ENST00000055335 TP53AIP1Q9HCN2 124 aa12.16□□□□□ -0.46
PPP1R3F-201ENST00000055335 Q96NJ1 140 aa12.14□□□□□ -0.47
PPP1R3F-201ENST00000055335 DNAH1Q9P2D7 4330 aa12.14□□□□□ -0.47
PPP1R3F-201ENST00000055335 C14orf177Q52M58 125 aa12.13□□□□□ -0.47
PPP1R3F-201ENST00000055335 DNAH9Q9NYC9 4486 aa12.11□□□□□ -0.47
PPP1R3F-201ENST00000055335 A0A1B0GVX0 72 aa12.11□□□□□ -0.47
PPP1R3F-201ENST00000055335 RETNLBQ9BQ08 111 aa12.11□□□□□ -0.47
PPP1R3F-201ENST00000055335 LINC01558Q9Y6Z2 57 aa12.11□□□□□ -0.47
PPP1R3F-201ENST00000055335 A6NN06 94 aa12.1□□□□□ -0.47
PPP1R3F-201ENST00000055335 MRPL34Q9BQ48 92 aaKnown RBP12.1□□□□□ -0.47
PPP1R3F-201ENST00000055335 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.09□□□□□ -0.47
PPP1R3F-201ENST00000055335 HUWE1Q7Z6Z7 4374 aaKnown RBP12.07□□□□□ -0.48
PPP1R3F-201ENST00000055335 Q6ZR54 194 aa12.04□□□□□ -0.48
PPP1R3F-201ENST00000055335 CMYA5Q8N3K9 4069 aa12.03□□□□□ -0.48
PPP1R3F-201ENST00000055335 Q5W150 140 aa12.01□□□□□ -0.49
PPP1R3F-201ENST00000055335 C7orf65Q6ZTY9 151 aa12.01□□□□□ -0.49
PPP1R3F-201ENST00000055335 CIRBP-AS1Q8TBR5 109 aa11.99□□□□□ -0.49
PPP1R3F-201ENST00000055335 KRTAP13-1Q8IUC0 172 aa11.99□□□□□ -0.49
PPP1R3F-201ENST00000055335 MDFIQ99750 246 aa11.99□□□□□ -0.49
PPP1R3F-201ENST00000055335 PRAC1Q96KF2 57 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms