RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 LORP23490 312 aaPredicted RBP2.65□□□□□ -1.99
CFTR-201ENST00000003084 CR1P17927 2039 aa2.65□□□□□ -1.99
CFTR-201ENST00000003084 NOTCH2Q04721 2471 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 MGAQ8IWI9 3026 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 FAM104AQ969W3 186 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 A0A1W2PNM2 257 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 COA5Q86WW8 74 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 TACC2O95359 2948 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 CELSR1Q9NYQ6 3014 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 LINC01600Q96MT4 127 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 NOTCH3Q9UM47 2321 aa2.64□□□□□ -1.99
CFTR-201ENST00000003084 CSMD2Q7Z408 3487 aa2.63□□□□□ -1.99
CFTR-201ENST00000003084 Q6ZSA8 131 aa2.63□□□□□ -1.99
CFTR-201ENST00000003084 CCDC168Q8NDH2 2452 aa2.63□□□□□ -1.99
CFTR-201ENST00000003084 SPRR1AP35321 89 aa2.63□□□□□ -1.99
CFTR-201ENST00000003084 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
CFTR-201ENST00000003084 CYP4F30PQ9H0H9 118 aa2.62□□□□□ -1.99
CFTR-201ENST00000003084 ANKRD17O75179 2603 aaKnown RBP2.62□□□□□ -1.99
CFTR-201ENST00000003084 SPRR1BP22528 89 aa2.62□□□□□ -1.99
CFTR-201ENST00000003084 Q75L30 129 aa2.62□□□□□ -1.99
CFTR-201ENST00000003084 SPANXA2-OT1Q8N9U9 137 aa2.62□□□□□ -1.99
CFTR-201ENST00000003084 LRRK2Q5S007 2527 aa2.62□□□□□ -1.99
CFTR-201ENST00000003084 A8MUN3 132 aa2.62□□□□□ -1.99
CFTR-201ENST00000003084 Q5VSD8 79 aa2.61□□□□□ -1.99
CFTR-201ENST00000003084 A0A0G2JQZ4 141 aa2.61□□□□□ -1.99
CFTR-201ENST00000003084 PKD1L2Q7Z442 2459 aa2.61□□□□□ -1.99
CFTR-201ENST00000003084 ANKRD11Q6UB99 2663 aaPredicted RBP2.61□□□□□ -1.99
CFTR-201ENST00000003084 KRTAP26-1Q6PEX3 210 aa2.61□□□□□ -1.99
CFTR-201ENST00000003084 MT3P25713 68 aa2.61□□□□□ -1.99
CFTR-201ENST00000003084 KLKP1Q107X0 134 aa2.61□□□□□ -1.99
CFTR-201ENST00000003084 ABCA2Q9BZC7 2435 aa2.61□□□□□ -1.99
CFTR-201ENST00000003084 MUC4Q99102 2169 aa2.61□□□□□ -1.99
CFTR-201ENST00000003084 OXTP01178 125 aa2.6□□□□□ -1.99
CFTR-201ENST00000003084 UQCR11O14957 56 aa2.6□□□□□ -1.99
CFTR-201ENST00000003084 Q6ZR54 194 aa2.6□□□□□ -1.99
CFTR-201ENST00000003084 KRTAP10-1P60331 282 aa2.59□□□□□ -1.99
CFTR-201ENST00000003084 KRTAP1-5Q9BYS1 174 aa2.59□□□□□ -1.99
CFTR-201ENST00000003084 FP248Q71RG6 208 aaPredicted RBP2.59□□□□□ -2
CFTR-201ENST00000003084 LCE2AQ5TA79 106 aaPredicted RBP2.59□□□□□ -2
CFTR-201ENST00000003084 ZCCHC13Q8WW36 166 aaKnown RBP2.59□□□□□ -2
CFTR-201ENST00000003084 PRRC2CQ9Y520 2896 aaKnown RBP2.58□□□□□ -2
CFTR-201ENST00000003084 NBPF19A0A087WUL8 3843 aa2.58□□□□□ -2
CFTR-201ENST00000003084 SONP18583 2426 aaKnown RBP2.58□□□□□ -2
CFTR-201ENST00000003084 BSNQ9UPA5 3926 aa2.58□□□□□ -2
CFTR-201ENST00000003084 MIR22HGQ0VDD5 57 aa2.57□□□□□ -2
CFTR-201ENST00000003084 COL12A1Q99715 3063 aa2.57□□□□□ -2
CFTR-201ENST00000003084 KRTAP10-2P60368 255 aa2.57□□□□□ -2
CFTR-201ENST00000003084 CEP295Q9C0D2 2601 aa2.57□□□□□ -2
CFTR-201ENST00000003084 CELSR2Q9HCU4 2923 aa2.56□□□□□ -2
CFTR-201ENST00000003084 CUBNO60494 3623 aa2.56□□□□□ -2
CFTR-201ENST00000003084 MMP24-AS1A0A0U1RRL7 71 aa2.55□□□□□ -2
CFTR-201ENST00000003084 HRES1P13985 223 aa2.55□□□□□ -2
CFTR-201ENST00000003084 S4R3F8 94 aa2.55□□□□□ -2
CFTR-201ENST00000003084 ABCA12Q86UK0 2595 aa2.55□□□□□ -2
CFTR-201ENST00000003084 RPS29P62273 56 aaKnown RBP2.55□□□□□ -2
CFTR-201ENST00000003084 OTOGQ6ZRI0 2925 aa2.55□□□□□ -2
CFTR-201ENST00000003084 Q8NDZ9 215 aa2.55□□□□□ -2
CFTR-201ENST00000003084 H7BZZ5 65 aa2.54□□□□□ -2
CFTR-201ENST00000003084 M0R2T5 61 aa2.54□□□□□ -2
CFTR-201ENST00000003084 CRIPTQ9P021 101 aa2.54□□□□□ -2
CFTR-201ENST00000003084 MYO18BQ8IUG5 2567 aa2.54□□□□□ -2
CFTR-201ENST00000003084 LINC00472Q9H8W2 130 aa2.54□□□□□ -2
CFTR-201ENST00000003084 VPS13CQ709C8 3753 aa2.54□□□□□ -2
CFTR-201ENST00000003084 CSAG1Q6PB30 78 aa2.53□□□□□ -2
CFTR-201ENST00000003084 KRTAP16-1A8MUX0 517 aa2.53□□□□□ -2
CFTR-201ENST00000003084 NIPBLQ6KC79 2804 aaeCLIP2.53□□□□□ -2
CFTR-201ENST00000003084 LCA10Q71F78 164 aa2.53□□□□□ -2
CFTR-201ENST00000003084 FASNP49327 2511 aaKnown RBP2.53□□□□□ -2.01
CFTR-201ENST00000003084 Q6ZRN7 208 aaPredicted RBP2.52□□□□□ -2.01
CFTR-201ENST00000003084 SPTBN4Q9H254 2564 aa2.52□□□□□ -2.01
CFTR-201ENST00000003084 F8P00451 2351 aa2.52□□□□□ -2.01
CFTR-201ENST00000003084 CDC42SE1Q9NRR8 79 aa2.52□□□□□ -2.01
CFTR-201ENST00000003084 KRTAP4-16G5E9R7 235 aaPredicted RBP2.51□□□□□ -2.01
CFTR-201ENST00000003084 CHD8Q9HCK8 2581 aa2.51□□□□□ -2.01
CFTR-201ENST00000003084 Q5W150 140 aa2.51□□□□□ -2.01
CFTR-201ENST00000003084 PLAC4Q8WY50 150 aa2.51□□□□□ -2.01
CFTR-201ENST00000003084 USP9XQ93008 2570 aaPredicted RBP2.51□□□□□ -2.01
CFTR-201ENST00000003084 CRYBG3Q68DQ2 2970 aa2.51□□□□□ -2.01
CFTR-201ENST00000003084 ASB16-AS1Q495Z4 193 aa2.51□□□□□ -2.01
CFTR-201ENST00000003084 JMJD1CQ15652 2540 aa2.5□□□□□ -2.01
CFTR-201ENST00000003084 SPINK7P58062 85 aa2.5□□□□□ -2.01
CFTR-201ENST00000003084 AKAP9Q99996 3911 aa2.5□□□□□ -2.01
CFTR-201ENST00000003084 Q1T7F1 81 aa2.49□□□□□ -2.01
CFTR-201ENST00000003084 FN1P02751 2386 aaKnown RBP2.49□□□□□ -2.01
CFTR-201ENST00000003084 KRTAP29-1A8MX34 341 aaPredicted RBP2.49□□□□□ -2.01
CFTR-201ENST00000003084 DMAC1Q96GE9 116 aa2.49□□□□□ -2.01
CFTR-201ENST00000003084 A0A1B0GU33 70 aa2.49□□□□□ -2.01
CFTR-201ENST00000003084 A0A0D9SG42 100 aa2.49□□□□□ -2.01
CFTR-201ENST00000003084 PANO1I0J062 215 aa2.49□□□□□ -2.01
CFTR-201ENST00000003084 AKAP13Q12802 2813 aa2.48□□□□□ -2.01
CFTR-201ENST00000003084 C2CD3Q4AC94 2353 aa2.48□□□□□ -2.01
CFTR-201ENST00000003084 MYO9AB2RTY4 2548 aa2.48□□□□□ -2.01
CFTR-201ENST00000003084 TLN2Q9Y4G6 2542 aa2.48□□□□□ -2.01
CFTR-201ENST00000003084 Q8N9P0 234 aaPredicted RBP2.48□□□□□ -2.01
CFTR-201ENST00000003084 Q5XG85 94 aa2.48□□□□□ -2.01
CFTR-201ENST00000003084 POLQO75417 2590 aa2.47□□□□□ -2.01
CFTR-201ENST00000003084 LINC01558Q9Y6Z2 57 aa2.47□□□□□ -2.01
CFTR-201ENST00000003084 USP9YO00507 2555 aaPredicted RBP2.46□□□□□ -2.02
CFTR-201ENST00000003084 ZFYVE26Q68DK2 2539 aa2.46□□□□□ -2.02
CFTR-201ENST00000003084 KRTAP11-1Q8IUC1 163 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms