RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Cd200r1lQ6XJV6 249 aa10.29□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Tns1E9Q0S6 1888 aaKnown RBP10.29□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Pate4Q09098 99 aa10.29□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Tmem52Q9D702 196 aa10.29□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Gm7102J3QQ10 178 aa10.29□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Lsm4Q9QXA5 137 aaKnown RBP10.29□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Igkv14-111A0A140T8P9 117 aa10.29□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Ep300B2RWS6 2412 aa10.29□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Ly6g6fB2RXM6 300 aa10.28□□□□□ -0.76
Col6a3-208ENSMUST00000188587 P01638 115 aa10.28□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Dnase2P56542 353 aa10.28□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Fxyd7P59648 80 aa10.28□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Tmem89Q9DA04 169 aa10.28□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Igkv4-53A0A0G2JFC6 119 aa10.28□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Zfp72Q0VFY0 435 aa10.28□□□□□ -0.76
Col6a3-208ENSMUST00000188587 MlanaQ2TA50 113 aa10.28□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Ang6Q5GAN0 147 aa10.28□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Lyzl1Q9CPX3 148 aa10.28□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Chchd5Q9CQP3 110 aa10.28□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Igkv4-72A0A0B4J1I4 117 aa10.28□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Gkn1Q9CR36 201 aa10.28□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Ighv1-16A0A075B5U1 98 aa10.28□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Gm44973A0A140LJJ1 189 aa10.28□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Gm10521E9PZK0 135 aa10.27□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Hist1h1tQ07133 208 aa10.27□□□□□ -0.76
Col6a3-208ENSMUST00000188587 Ttc9cQ810A3 171 aa10.27□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Slc25a39Q9D8K8 359 aa10.27□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Ighv3-4A0A0A6YXF1 117 aa10.27□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Igkv3-9A0A140T8P4 119 aa10.27□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Ighv3-8A0A075B5T0 131 aa10.27□□□□□ -0.77
Col6a3-208ENSMUST00000188587 B1ARW8 110 aa10.27□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Cdcp2Q8BQH6 427 aa10.27□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Chac1Q8R3J5 223 aa10.27□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Igkv8-34A0A0G2JDU0 121 aa10.27□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Ear14F6YUX7 155 aa10.27□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Olfr484Q8VFD3 321 aa10.27□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Gata4Q08369 441 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 SelenokQ9JLJ1 94 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Wisp1O54775 367 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Taf15Q8BQ46 557 aaKnown RBP10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Anapc10Q8K2H6 185 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 OtorQ9JIE3 128 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Trav14d-3-dv8A0A075B619 120 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Gm26727M0QWT1 121 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Cox6a1P43024 111 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Fam110dQ80X91 271 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 MpzP27573 248 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Gm4763Q8CFJ5 196 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Trbv13-3A0A0B4J1H2 113 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Ighv1-80A0A075B5Y3 117 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Gm29423A0A087WRM1 55 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Erdr1J3QMM0 206 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 UngP97931 306 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 ApohQ01339 345 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Trdv4Q5R1A3 115 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Znf474Q6V5K9 347 aa10.26□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Trbv12-1A0A0B4J1H0 124 aa10.25□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Wipf3P0C7L0 485 aa10.25□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Fblim1Q71FD7 375 aa10.25□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Plac1Q9JI83 173 aa10.25□□□□□ -0.77
Col6a3-208ENSMUST00000188587 C1ql4Q4ZJM9 238 aa10.25□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Parm1Q923D3 296 aa10.25□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Gm11110Q3U4K9 109 aa10.25□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Tmem170aQ9D342 144 aa10.25□□□□□ -0.77
Col6a3-208ENSMUST00000188587 1700084M14RikB1AT01 78 aa10.25□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Tcl1b4P56844 120 aa10.25□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Ighv5-12-4A0A0A6YWG4 117 aa10.25□□□□□ -0.77
Col6a3-208ENSMUST00000188587 1700031F05RikB1AX30 191 aa10.25□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Rs1Q9Z1L4 224 aa10.25□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Igkv4-81A0A0G2JEY5 119 aa10.25□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Dad1P61804 113 aa10.25□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Znf319Q9ERR8 581 aa10.25□□□□□ -0.77
Col6a3-208ENSMUST00000188587 BmperQ8CJ69 685 aa10.24□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Tcrg-V5A0A0G2JGV5 113 aa10.24□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Gm10767Q3TQP0 103 aa10.24□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Zfp362B1ASA5 418 aa10.24□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Mrpl27Q99N92 148 aa10.24□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Gm37388A0A0A6YY46 143 aa10.24□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Defa27F2Z403 93 aa10.24□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Supt4h1aP63271 117 aa10.24□□□□□ -0.77
Col6a3-208ENSMUST00000188587 TdhQ8K3F7 373 aa10.24□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Reg3dQ9QUS9 175 aa10.24□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Wdr86D3Z757 380 aa10.24□□□□□ -0.77
Col6a3-208ENSMUST00000188587 EtdQ80SW5 59 aa10.24□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Kiaa1549Q68FD9 1940 aa10.24□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Ifitm5O88728 134 aa10.24□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Mgst3Q9CPU4 153 aa10.24□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Colca2F8VPY8 239 aa10.24□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Gm21370Q3T9V6 190 aa10.24□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Igkv4-80A0A075B5L7 116 aa10.23□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Trbv3A0A0A6YYE2 117 aa10.23□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Igkv4-61A0A0G2JH00 117 aa10.23□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Fam19a2Q7TPG7 131 aa10.23□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Edn3P48299 214 aa10.23□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Tex26Q0VB26 296 aa10.23□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Gm10604Q3V0X7 143 aa10.23□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Pkd1l2Q7TN88 2461 aa10.23□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Shisal2aA2A9G7 189 aa10.23□□□□□ -0.77
Col6a3-208ENSMUST00000188587 C330021F23RikQ8C7T0 141 aa10.23□□□□□ -0.77
Col6a3-208ENSMUST00000188587 Cited2O35740 269 aa10.23□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 60.3 ms