RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Vmn1r46Q9EQ45 309 aa6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 EsdQ9R0P3 282 aa6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 IcosQ9WVS0 200 aa6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gm14214V9GX35 225 aa6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gm16442D3YZG3 307 aa6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ly6lH3BJG9 140 aa6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 Vdac2Q60930 295 aaKnown RBP6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ammecr1lQ8JZZ6 310 aa6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 Rasl11bQ922H7 247 aa6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 SmagpQ99KC7 97 aa6.47□□□□□ -1.37
Trim39-205ENSMUST00000173369 Tenm2Q9WTS5 2764 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Pglyrp3A1A547 347 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr267A2AM35 313 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr978E9Q985 311 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gm21244J3QK38 227 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 P01788 123 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ifna5P07349 189 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Ca5aP23589 299 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gnb4P29387 340 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Pfn1P62962 140 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Nmes1Q810Q5 83 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr958Q8VEY3 312 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Olfr338Q8VGK6 306 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Cst14Q8VII3 130 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Rab29Q91YQ1 204 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Zfp958Q99LG7 467 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 AhspQ9CY02 102 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Spcs1Q9D958 161 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 EppinQ9DA01 134 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Hspb9Q9DAM3 168 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Eny2Q9JIX0 101 aaKnown RBP6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gng13Q9JMF3 67 aa6.46□□□□□ -1.37
Trim39-205ENSMUST00000173369 Gm765B2RVL9 189 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Gm9242J3QNY1 357 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Klf12O35738 402 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Nkx2-8O70584 235 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Olfr1537P34983 314 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 FauP35545 74 aaKnown RBP6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Gm10735Q3US96 136 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Crip3Q6Q6R3 243 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Olfr509Q8VF20 321 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Olfr1441Q8VFV3 318 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 V1ra8Q9EQ48 279 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Olfr972Q9EQA2 314 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Gm37797A0A1D5RLC8 261 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 A0A286YDM5 308 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 9230102O04RikA2ASX7 82 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Gm16519F8VQK7 162 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Gm5108J3QP01 101 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Gm10226O88253 85 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Mtatp8P03930 67 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 ApcsP12246 224 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Q24JP4 165 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Gm7489Q3UT34 171 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Erg28Q9ERY9 140 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Mpdu1Q9R0Q9 247 aa6.46□□□□□ -1.38
Trim39-205ENSMUST00000173369 Rnase1P00683 149 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Evi2aP20934 223 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Gpm6bP35803 328 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Vstm2aQ8R0A6 236 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Dnah10D3YYQ8 4591 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Trav9-1A0A075B601 112 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Trbv3A0A0A6YYE2 117 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Gm2026A2ART4 498 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Olfr1189A2AV11 306 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Gm6096D3YTY6 151 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Gm43191F6YIH5 235 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Gm10553J3QPF1 123 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 LfngO09010 378 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Q497N7 227 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Minos1Q7TNS2 76 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Slamf7Q8BHK6 333 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Iba57Q8CAK1 358 aaKnown RBP6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Olfr975Q8VG91 310 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Tmem128Q9CZB9 163 aa6.45□□□□□ -1.38
Trim39-205ENSMUST00000173369 Ighv8-6A0A0A6YXA3 118 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Vma21-psA0A140T8R2 101 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Olfr1185-ps1F6XP16 303 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Gm21921J3QNB5 361 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Gata2O09100 480 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Ypel3P61237 119 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 ErhP84089 104 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Olfr328Q5NCD3 310 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Zic4Q61467 341 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 A830031A19RikQ8BNT5 113 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Nrn1Q8CFV4 142 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Btf3l4Q9CQH7 158 aaKnown RBP6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Olfr709-ps1A0A140T8J9 307 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Pitx3O35160 302 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Rnf5O35445 180 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Iglc2P01844 104 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Hoxd3P09027 433 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Gm9Q3UKW5 162 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Bst1Q64277 311 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Klre1Q8CJC7 226 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Vmn1r202Q8R259 302 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Timm9Q9WV98 89 aaKnown RBP6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 TroQ6DIC6 2087 aa6.44□□□□□ -1.38
Trim39-205ENSMUST00000173369 Ighv1-4A0A075B5T4 117 aa6.43□□□□□ -1.38
Trim39-205ENSMUST00000173369 Gm28372A0A087WNV0 220 aa6.43□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 69.1 ms