RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 Chac1Q8R3J5 223 aa5.66□□□□□ -1.5
Scn3a-202ENSMUST00000100069 Parp4E9PYK3 1969 aa5.66□□□□□ -1.5
Scn3a-202ENSMUST00000100069 P01655 112 aa5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 ApohQ01339 345 aa5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 Znf474Q6V5K9 347 aa5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 Klhdc3Q8VEM9 382 aa5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 ApomQ9Z1R3 190 aa5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 Olfr745Q7TRL9 328 aa5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 Ndufc2Q9CQ54 120 aa5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 Obsl1D3YYU8 1804 aaKnown RBP5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 Igkv4-80A0A075B5L7 116 aa5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 Igkv4-53A0A0G2JFC6 119 aa5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 Tln2Q71LX4 2375 aa5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 Gm15128A2ADW8 449 aa5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 Foxi3E0CZH3 425 aa5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 Defb30Q30KN4 75 aa5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 Spata46Q4FZF2 204 aa5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 C1qtnf5Q8K479 243 aa5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 OtosQ8R448 89 aa5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 NmbQ9CR53 121 aa5.65□□□□□ -1.5
Scn3a-202ENSMUST00000100069 Gm4064A0A087WR82 380 aa5.65□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm28269A0A087WSG3 125 aa5.65□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm10352B2RWR6 380 aa5.65□□□□□ -1.51
Scn3a-202ENSMUST00000100069 BC035044E0CXF8 138 aa5.65□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm21693J3QK27 380 aa5.65□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Rbmy1a1O35698 380 aa5.65□□□□□ -1.51
Scn3a-202ENSMUST00000100069 H2al1nQ497L1 109 aa5.65□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ttc9cQ810A3 171 aa5.65□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Defa21Q8C1P2 93 aa5.65□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Lsm4Q9QXA5 137 aaKnown RBP5.65□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Supt4h1bQ9Z199 117 aa5.65□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Nup210lQ9D2F7 1881 aa5.65□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ighv1-39A0A075B5V5 117 aa5.65□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Hist2h2beQ64524 126 aa5.65□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Igkv3-9A0A140T8P4 119 aa5.65□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ca5aP23589 299 aa5.65□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Pnrc2Q9CR73 140 aa5.65□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ighv1-81A0A075B5Y4 117 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 MlanaQ2TA50 113 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Nr2c2apQ3TV70 140 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ccl12Q62401 104 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Dand5Q76LW6 185 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Tomm40Q9QYA2 361 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 AcacaQ5SWU9 2345 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm6871L7N248 545 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Cbln3Q9JHG0 197 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Trav7d-3Q5R1I1 112 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Qrich2A0A140LIY9 2337 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Kif26aQ52KG5 1881 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm33815A0A087WNV3 176 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Dcaf12l1Q8CBW4 501 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Znf22Q9ERU3 237 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Fndc7A2AED3 737 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 P0C1Z5 52 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 NrtnP97463 195 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Tmem255bQ5FW56 369 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Rnf126Q91YL2 313 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Rita1Q9D1H0 253 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Cacna1eQ61290 2272 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Igkv14-126A0A075B5K0 117 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Trav4n-4A0A075B615 110 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Trav8-1A0A075B641 109 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 MsmbO08540 113 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 PdpnQ62011 172 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Cacna1hO88427 2365 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ighv1-31A0A0A6YWK5 117 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 NdpP48744 131 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ly6g6eQ8K1T6 166 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Plpp2Q9DAX2 276 aa5.64□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Spink1P09036 80 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ypel3P61237 119 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ube2d2bQ6ZWY6 147 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 SostQ99P68 211 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Med13Q5SWW4 2171 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 LctF8VPT3 1931 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm12845A0A0N4SUM5 588 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Eid2bE9Q2Y0 151 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm10188Q3V432 135 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Zfp646Q6NV66 1788 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ighv5-9-1A0A0A6YVS4 126 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gpx1P11352 201 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Pate2Q3UW31 111 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm10912Q3UXH0 145 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ifitm1Q9D103 106 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ccpg1osV9GXK1 122 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Igkv4-57-1A0A075B5M4 119 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Foxf2O54743 446 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Svs5P30933 122 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Igh-VJ558P01758 117 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm21370Q3T9V6 190 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Pygo2Q80V76 405 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Timm10bQ9WV96 100 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Plxna4Q80UG2 1893 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Igkv4-90A0A075B5L3 117 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ighv5-6A0A075B5Q0 117 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm20379A0A087WR34 119 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 SeboxP70368 190 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 SlpiP97430 131 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 BC049762Q8C601 163 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Pip4p2Q9CZX7 257 aa5.63□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 139.4 ms