RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Phpt1Q9DAK9 124 aa13.42□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Fhl3Q9R059 289 aa13.42□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Esp24A8R0V6 68 aa13.41□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 SlpiP97430 131 aa13.41□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Hist1h1tQ07133 208 aa13.41□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Vdac2Q60930 295 aaKnown RBP13.41□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Msrb3Q8BU85 253 aa13.41□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Cysltr1Q99JA4 352 aa13.41□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Arfgef3Q3UGY8 2170 aa13.41□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Trav9d-1A0A075B699 112 aa13.41□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Olfr745Q7TRL9 328 aa13.41□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Cdk2ap2Q9CPY4 127 aa13.41□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Supt4h1bQ9Z199 117 aa13.41□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Ighv5-6A0A075B5Q0 117 aa13.4□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Foxl2O88470 375 aa13.4□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Spink1P09036 80 aa13.4□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Rnf166Q3U9F6 237 aa13.4□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Gm10192Q3V0S1 108 aa13.4□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Psg25Q497W1 475 aa13.4□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Ccl17F6R5P4 103 aa13.4□□□□□ -0.26
Ubfd1-201ENSMUST00000033158 Ighv1-80A0A075B5Y3 117 aa13.39□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Trbv3A0A0A6YYE2 117 aa13.39□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Olfr1367Q8VFG2 316 aa13.39□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Id3P41133 119 aa13.39□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Trav8-1A0A075B641 109 aa13.39□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Trav14n-3A0A075B645 120 aa13.39□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Tctex1d4Q8CDY7 219 aa13.39□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Timm10bQ9WV96 100 aa13.39□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Gm26938S4R185 226 aa13.39□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Igkv19-93A0A0G2JFZ3 115 aa13.39□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Sap30O88574 220 aa13.39□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Gm7489Q3UT34 171 aa13.39□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Gm7075D3Z497 112 aa13.38□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Gng7Q61016 68 aa13.38□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Zfp248Q640N4 576 aa13.38□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Mrpl53Q9D1H8 118 aaKnown RBP13.38□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Gm10775Q3V290 127 aa13.38□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Ang6Q5GAN0 147 aa13.38□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Anapc13Q8R034 74 aa13.38□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Uqcrfs1Q9CR68 274 aa13.38□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Fhl4Q8CDC8 279 aa13.38□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Tomm40Q9QYA2 361 aa13.38□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Gm2174F6ZVF2 133 aa13.38□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Gm904Q3V2L5 102 aa13.38□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 GlrxQ9QUH0 107 aa13.38□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Notch3Q61982 2318 aa13.38□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Tmem141A2AJB2 108 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Inafm1E9PV59 130 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Gm5819E9PZ96 154 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 P0C1Z5 52 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Myod1P10085 318 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Rpl36aP83882 106 aaKnown RBP13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Prdm6Q3UZD5 596 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 MycbQ6P8Z1 170 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Ifi27l2aQ8R412 90 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Mapk1ip1Q9D7G9 263 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 LitafQ9JLJ0 161 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 TncQ80YX1 2110 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Plxnb1Q8CJH3 2119 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Defa1P11477 93 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Tpsab1Q02844 273 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Gm5105Q8C6Y9 112 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Fbxl15Q91W61 300 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Mrpl32Q9DCI9 187 aaKnown RBP13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Adamts9E9PUN6 1931 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Eml5Q8BQM8 1977 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Ighv8-6A0A0A6YXA3 118 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Tmem238A9JSM3 176 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Wisp3D3Z5L9 354 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Ube2e1P52482 193 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Ypel3P61237 119 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Cox7a2lQ61387 111 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Vmn1r197Q8R265 298 aa13.37□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Ighv3-4A0A0A6YXF1 117 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Nat8b-psE0CYC6 232 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Znf664Q4VA44 261 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Igfbpl1Q80W15 270 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Tm4sf20Q9CQY8 226 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Klf13Q9JJZ6 289 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Tpsg1Q9QUL7 311 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Plxna4Q80UG2 1893 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Ighv1-55A0A075B5W6 117 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Gm94Q3V2D2 93 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 AdipoqQ60994 247 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Olfr984Q8VFN1 314 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 SelenokQ9JLJ1 94 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Trbv30A0A0B4J1P1 111 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Dmrt3Q80WT2 476 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Mogat1Q91ZV4 335 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Ighv8-2A0A0A6YW58 119 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Tmem200bD3Z0P8 284 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Cox8bP48772 70 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Defb26Q30KN7 186 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Spata46Q4FZF2 204 aa13.36□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Znf787Q8BIF9 381 aa13.35□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Olfr976Q8VF15 326 aa13.35□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Spata45Q9CVW4 97 aa13.35□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Gm45785A0A1B0GT05 94 aa13.35□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Ighv1-62-3P01754 117 aa13.35□□□□□ -0.27
Ubfd1-201ENSMUST00000033158 Foxf1Q61080 378 aa13.35□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 104.5 ms