RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 SPANXDQ9BXN6 97 aa12.88□□□□□ -0.35
SCN1B-206ENST00000638536 ETDCA0A1B0GVM5 59 aa12.86□□□□□ -0.35
SCN1B-206ENST00000638536 PYY3Q5JQD4 70 aa12.86□□□□□ -0.35
SCN1B-206ENST00000638536 B5MCH6 92 aa12.85□□□□□ -0.35
SCN1B-206ENST00000638536 KRTAP13-2Q52LG2 175 aa12.85□□□□□ -0.35
SCN1B-206ENST00000638536 RPL13AP40429 203 aaKnown RBP12.84□□□□□ -0.35
SCN1B-206ENST00000638536 SMCR5Q8TEV8 140 aa12.84□□□□□ -0.35
SCN1B-206ENST00000638536 CRYGAP11844 174 aa12.84□□□□□ -0.35
SCN1B-206ENST00000638536 TRAV23DV6A0A075B6W5 121 aa12.83□□□□□ -0.36
SCN1B-206ENST00000638536 CTAG1AP78358 180 aa12.83□□□□□ -0.36
SCN1B-206ENST00000638536 HSBP1L1C9JCN9 74 aa12.82□□□□□ -0.36
SCN1B-206ENST00000638536 MUSTN1Q8IVN3 82 aa12.82□□□□□ -0.36
SCN1B-206ENST00000638536 LRP2P98164 4655 aa12.82□□□□□ -0.36
SCN1B-206ENST00000638536 Q9BRP9 147 aa12.81□□□□□ -0.36
SCN1B-206ENST00000638536 UBR4Q5T4S7 5183 aa12.81□□□□□ -0.36
SCN1B-206ENST00000638536 ERC2-IT1O76042 136 aa12.8□□□□□ -0.36
SCN1B-206ENST00000638536 OR13C6PQ8NH95 151 aa12.8□□□□□ -0.36
SCN1B-206ENST00000638536 SPRR4Q96PI1 79 aa12.8□□□□□ -0.36
SCN1B-206ENST00000638536 JOSD1Q15040 202 aaPredicted RBP12.8□□□□□ -0.36
SCN1B-206ENST00000638536 ZNF73O43830 326 aaPredicted RBP12.79□□□□□ -0.36
SCN1B-206ENST00000638536 FAM229BQ4G0N7 80 aa12.79□□□□□ -0.36
SCN1B-206ENST00000638536 TYMSOSQ8TAI1 123 aa12.79□□□□□ -0.36
SCN1B-206ENST00000638536 Q6ZRX8 168 aa12.78□□□□□ -0.36
SCN1B-206ENST00000638536 IFITM1P13164 125 aa12.77□□□□□ -0.36
SCN1B-206ENST00000638536 Q6ZVH6 145 aa12.77□□□□□ -0.36
SCN1B-206ENST00000638536 C3orf22Q8N5N4 141 aa12.76□□□□□ -0.37
SCN1B-206ENST00000638536 PPDPFQ9H3Y8 114 aa12.75□□□□□ -0.37
SCN1B-206ENST00000638536 LPAP08519 4548 aa12.74□□□□□ -0.37
SCN1B-206ENST00000638536 TSTD3H0UI37 97 aa12.73□□□□□ -0.37
SCN1B-206ENST00000638536 TSPAN13O95857 204 aa12.71□□□□□ -0.37
SCN1B-206ENST00000638536 COX8AP10176 69 aa12.71□□□□□ -0.37
SCN1B-206ENST00000638536 COPS9Q8WXC6 57 aa12.7□□□□□ -0.38
SCN1B-206ENST00000638536 PAM16Q9Y3D7 125 aa12.7□□□□□ -0.38
SCN1B-206ENST00000638536 ZNF706Q9Y5V0 76 aaPredicted RBP12.7□□□□□ -0.38
SCN1B-206ENST00000638536 GAGE2AQ6NT46 116 aa12.7□□□□□ -0.38
SCN1B-206ENST00000638536 C14orf144Q96I85 54 aa12.7□□□□□ -0.38
SCN1B-206ENST00000638536 C6orf99Q4VX62 202 aa12.68□□□□□ -0.38
SCN1B-206ENST00000638536 A6NDN8 102 aa12.67□□□□□ -0.38
SCN1B-206ENST00000638536 SPATA45Q537H7 98 aa12.67□□□□□ -0.38
SCN1B-206ENST00000638536 LINC00483Q53H64 154 aa12.67□□□□□ -0.38
SCN1B-206ENST00000638536 ST20-AS1Q8NBB2 130 aa12.66□□□□□ -0.38
SCN1B-206ENST00000638536 CBY1Q9Y3M2 126 aa12.66□□□□□ -0.38
SCN1B-206ENST00000638536 A4D1N5 150 aa12.65□□□□□ -0.38
SCN1B-206ENST00000638536 HINT1P49773 126 aaPredicted RBP12.65□□□□□ -0.38
SCN1B-206ENST00000638536 LINC00304Q8N9R0 145 aa12.64□□□□□ -0.39
SCN1B-206ENST00000638536 VAMP8Q9BV40 100 aa12.64□□□□□ -0.39
SCN1B-206ENST00000638536 DLEU1O43261 78 aa12.63□□□□□ -0.39
SCN1B-206ENST00000638536 ELOF1P60002 83 aaKnown RBP12.63□□□□□ -0.39
SCN1B-206ENST00000638536 COX7BP24311 80 aa12.62□□□□□ -0.39
SCN1B-206ENST00000638536 TRAV13-2A0A0B4J235 113 aa12.6□□□□□ -0.39
SCN1B-206ENST00000638536 SMIM11BQ8TCY0 68 aa12.6□□□□□ -0.39
SCN1B-206ENST00000638536 HIST1H4GQ99525 98 aa12.6□□□□□ -0.39
SCN1B-206ENST00000638536 C2orf91Q6ZV80 131 aa12.59□□□□□ -0.39
SCN1B-206ENST00000638536 IGLV9-49A0A0B4J1Y8 123 aa12.57□□□□□ -0.4
SCN1B-206ENST00000638536 DHRS4-AS1Q9P1J3 65 aa12.57□□□□□ -0.4
SCN1B-206ENST00000638536 SLC25A34Q6PIV7 304 aa12.56□□□□□ -0.4
SCN1B-206ENST00000638536 Q8NBF4 154 aa12.56□□□□□ -0.4
SCN1B-206ENST00000638536 PRO1933Q9H354 126 aa12.56□□□□□ -0.4
SCN1B-206ENST00000638536 TRBV7-6A0A0J9YX20 115 aa12.55□□□□□ -0.4
SCN1B-206ENST00000638536 MOBPQ13875 183 aa12.55□□□□□ -0.4
SCN1B-206ENST00000638536 PRR4Q16378 134 aa12.55□□□□□ -0.4
SCN1B-206ENST00000638536 RETNLBQ9BQ08 111 aa12.54□□□□□ -0.4
SCN1B-206ENST00000638536 HIGD1BQ9P298 99 aa12.54□□□□□ -0.4
SCN1B-206ENST00000638536 A0A1B0GWB2 263 aa12.53□□□□□ -0.4
SCN1B-206ENST00000638536 SPRR1BP22528 89 aa12.5□□□□□ -0.41
SCN1B-206ENST00000638536 RNF213Q63HN8 5207 aa12.49□□□□□ -0.41
SCN1B-206ENST00000638536 DEFB105AQ8NG35 78 aa12.48□□□□□ -0.41
SCN1B-206ENST00000638536 CFC1BP0CG36 223 aa12.48□□□□□ -0.41
SCN1B-206ENST00000638536 CFC1P0CG37 223 aa12.48□□□□□ -0.41
SCN1B-206ENST00000638536 LINC01547P58512 204 aaPredicted RBP12.47□□□□□ -0.41
SCN1B-206ENST00000638536 SSBP3-AS1Q7Z2R9 100 aa12.47□□□□□ -0.41
SCN1B-206ENST00000638536 C9orf153Q5TBE3 101 aa12.46□□□□□ -0.41
SCN1B-206ENST00000638536 SPAG11AQ6PDA7 123 aa12.46□□□□□ -0.41
SCN1B-206ENST00000638536 TAL2Q16559 108 aa12.44□□□□□ -0.42
SCN1B-206ENST00000638536 C4orf48Q5BLP8 95 aa12.44□□□□□ -0.42
SCN1B-206ENST00000638536 CEND1Q8N111 149 aa12.43□□□□□ -0.42
SCN1B-206ENST00000638536 Q1RN00 199 aa12.42□□□□□ -0.42
SCN1B-206ENST00000638536 SMIM29Q86T20 159 aa12.42□□□□□ -0.42
SCN1B-206ENST00000638536 H7C2G1 150 aa12.41□□□□□ -0.42
SCN1B-206ENST00000638536 M0R143 59 aa12.41□□□□□ -0.42
SCN1B-206ENST00000638536 LINC00575Q6W349 94 aa12.41□□□□□ -0.42
SCN1B-206ENST00000638536 IGLV5-48A0A075B6I7 105 aa12.4□□□□□ -0.42
SCN1B-206ENST00000638536 TEX49A0A1B0GTD5 131 aa12.4□□□□□ -0.42
SCN1B-206ENST00000638536 FXYD2P54710 66 aa12.4□□□□□ -0.42
SCN1B-206ENST00000638536 SPINK1P00995 79 aa12.4□□□□□ -0.42
SCN1B-206ENST00000638536 VAMP3Q15836 100 aa12.39□□□□□ -0.43
SCN1B-206ENST00000638536 Q8N377 158 aa12.38□□□□□ -0.43
SCN1B-206ENST00000638536 RAB37Q96AX2 223 aa12.38□□□□□ -0.43
SCN1B-206ENST00000638536 LAMTOR3Q9UHA4 124 aa12.38□□□□□ -0.43
SCN1B-206ENST00000638536 A0A0B4J2C4 111 aa12.37□□□□□ -0.43
SCN1B-206ENST00000638536 NHP2Q9NX24 153 aaKnown RBP12.37□□□□□ -0.43
SCN1B-206ENST00000638536 UQCR10Q9UDW1 63 aa12.37□□□□□ -0.43
SCN1B-206ENST00000638536 hADV29S1A0JD25 119 aa12.34□□□□□ -0.43
SCN1B-206ENST00000638536 SLC25A20O43772 301 aa12.34□□□□□ -0.43
SCN1B-206ENST00000638536 SNHG12Q9BXW3 62 aa12.34□□□□□ -0.43
SCN1B-206ENST00000638536 Q6ZQY7 126 aa12.33□□□□□ -0.43
SCN1B-206ENST00000638536 IGLV7-46A0A075B6I9 117 aa12.32□□□□□ -0.44
SCN1B-206ENST00000638536 A0A0G2JQZ4 141 aa12.32□□□□□ -0.44
SCN1B-206ENST00000638536 BVES-AS1Q5T3Y7 98 aa12.32□□□□□ -0.44
SCN1B-206ENST00000638536 HRCT1Q6UXD1 115 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms