RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 PRR15Q8IV56 129 aa11.66□□□□□ -0.54
CACNA1A-227ENST00000636549 LOC110117498A0A087WWA1 95 aa11.66□□□□□ -0.54
CACNA1A-227ENST00000636549 WIPF1O43516 503 aa11.65□□□□□ -0.55
CACNA1A-227ENST00000636549 PRR26Q8N8Z3 221 aa11.64□□□□□ -0.55
CACNA1A-227ENST00000636549 IGLV7-46A0A075B6I9 117 aa11.62□□□□□ -0.55
CACNA1A-227ENST00000636549 TNP2Q05952 138 aa11.62□□□□□ -0.55
CACNA1A-227ENST00000636549 CDC42SE1Q9NRR8 79 aa11.62□□□□□ -0.55
CACNA1A-227ENST00000636549 CENPFP49454 3210 aa11.62□□□□□ -0.55
CACNA1A-227ENST00000636549 C10orf142B7Z368 130 aa11.61□□□□□ -0.55
CACNA1A-227ENST00000636549 ABCA12Q86UK0 2595 aa11.61□□□□□ -0.55
CACNA1A-227ENST00000636549 H3BPC8 53 aa11.6□□□□□ -0.55
CACNA1A-227ENST00000636549 ERC2-IT1O76042 136 aa11.58□□□□□ -0.56
CACNA1A-227ENST00000636549 Q8N377 158 aa11.56□□□□□ -0.56
CACNA1A-227ENST00000636549 LUZP6Q538Z0 58 aa11.56□□□□□ -0.56
CACNA1A-227ENST00000636549 PCSK5Q92824 1860 aa11.55□□□□□ -0.56
CACNA1A-227ENST00000636549 TLX1NBP0CAT3 122 aa11.54□□□□□ -0.56
CACNA1A-227ENST00000636549 LINC00612Q8N6U2 182 aa11.54□□□□□ -0.56
CACNA1A-227ENST00000636549 LINC01546A6NGU7 62 aa11.52□□□□□ -0.57
CACNA1A-227ENST00000636549 FAM104AQ969W3 186 aa11.52□□□□□ -0.57
CACNA1A-227ENST00000636549 KCNQ1DNQ9H478 68 aa11.51□□□□□ -0.57
CACNA1A-227ENST00000636549 EIF4EBP3O60516 100 aaPredicted RBP11.49□□□□□ -0.57
CACNA1A-227ENST00000636549 LINC00483Q53H64 154 aa11.48□□□□□ -0.57
CACNA1A-227ENST00000636549 Q5VSD8 79 aa11.48□□□□□ -0.57
CACNA1A-227ENST00000636549 C19orf73Q9NVV2 129 aa11.48□□□□□ -0.57
CACNA1A-227ENST00000636549 TLN2Q9Y4G6 2542 aa11.48□□□□□ -0.57
CACNA1A-227ENST00000636549 SPRR4Q96PI1 79 aa11.45□□□□□ -0.58
CACNA1A-227ENST00000636549 ZNF462Q96JM2 2506 aa11.43□□□□□ -0.58
CACNA1A-227ENST00000636549 C9orf163Q8N9P6 203 aa11.42□□□□□ -0.58
CACNA1A-227ENST00000636549 LITAFQ99732 161 aa11.4□□□□□ -0.58
CACNA1A-227ENST00000636549 A0A1B0GW54 56 aa11.39□□□□□ -0.59
CACNA1A-227ENST00000636549 CD164Q04900 197 aa11.38□□□□□ -0.59
CACNA1A-227ENST00000636549 PIEZO1Q92508 2521 aa11.38□□□□□ -0.59
CACNA1A-227ENST00000636549 S4R3F8 94 aa11.38□□□□□ -0.59
CACNA1A-227ENST00000636549 PRO0461Q9UI25 63 aa11.37□□□□□ -0.59
CACNA1A-227ENST00000636549 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.37□□□□□ -0.59
CACNA1A-227ENST00000636549 ANKRD17O75179 2603 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-227ENST00000636549 F8P00451 2351 aa11.35□□□□□ -0.59
CACNA1A-227ENST00000636549 SETD2Q9BYW2 2564 aaPredicted RBP11.33□□□□□ -0.6
CACNA1A-227ENST00000636549 ACANP16112 2415 aa11.33□□□□□ -0.6
CACNA1A-227ENST00000636549 GIG44P09565 113 aaPredicted RBP11.32□□□□□ -0.6
CACNA1A-227ENST00000636549 RPS28P62857 69 aaKnown RBP11.29□□□□□ -0.6
CACNA1A-227ENST00000636549 UTRNP46939 3433 aa11.28□□□□□ -0.6
CACNA1A-227ENST00000636549 CYP4F30PQ9H0H9 118 aa11.28□□□□□ -0.6
CACNA1A-227ENST00000636549 PRR34Q9NV39 138 aa11.26□□□□□ -0.61
CACNA1A-227ENST00000636549 USP9XQ93008 2570 aaPredicted RBP11.23□□□□□ -0.61
CACNA1A-227ENST00000636549 A0A1W2PNM2 257 aa11.22□□□□□ -0.61
CACNA1A-227ENST00000636549 CR1P17927 2039 aa11.22□□□□□ -0.61
CACNA1A-227ENST00000636549 A0A1B0GU33 70 aa11.21□□□□□ -0.61
CACNA1A-227ENST00000636549 ANKRD11Q6UB99 2663 aaPredicted RBP11.21□□□□□ -0.62
CACNA1A-227ENST00000636549 Q1T7F1 81 aa11.2□□□□□ -0.62
CACNA1A-227ENST00000636549 R4GN34 69 aa11.18□□□□□ -0.62
CACNA1A-227ENST00000636549 SPTBN4Q9H254 2564 aa11.16□□□□□ -0.62
CACNA1A-227ENST00000636549 A0A096LNT2 108 aa11.16□□□□□ -0.62
CACNA1A-227ENST00000636549 PKD1L2Q7Z442 2459 aa11.16□□□□□ -0.62
CACNA1A-227ENST00000636549 POLQO75417 2590 aa11.15□□□□□ -0.62
CACNA1A-227ENST00000636549 HRES1P13985 223 aa11.15□□□□□ -0.62
CACNA1A-227ENST00000636549 CSAG1Q6PB30 78 aa11.14□□□□□ -0.63
CACNA1A-227ENST00000636549 CNBPP62633 177 aaKnown RBP11.13□□□□□ -0.63
CACNA1A-227ENST00000636549 KTN1-AS1Q86SY8 53 aa11.13□□□□□ -0.63
CACNA1A-227ENST00000636549 KRTAP1-3Q8IUG1 177 aa11.12□□□□□ -0.63
CACNA1A-227ENST00000636549 LCA10Q71F78 164 aa11.11□□□□□ -0.63
CACNA1A-227ENST00000636549 CHD8Q9HCK8 2581 aa11.09□□□□□ -0.63
CACNA1A-227ENST00000636549 PLAC4Q8WY50 150 aa11.08□□□□□ -0.64
CACNA1A-227ENST00000636549 H1FX-AS1Q4G0G2 97 aa11.08□□□□□ -0.64
CACNA1A-227ENST00000636549 Q8N9P0 234 aaPredicted RBP11.07□□□□□ -0.64
CACNA1A-227ENST00000636549 SPINK7P58062 85 aa11.06□□□□□ -0.64
CACNA1A-227ENST00000636549 MTORP42345 2549 aa11.06□□□□□ -0.64
CACNA1A-227ENST00000636549 PRAC1Q96KF2 57 aa11.06□□□□□ -0.64
CACNA1A-227ENST00000636549 H7BZZ5 65 aa11.05□□□□□ -0.64
CACNA1A-227ENST00000636549 DNAH12Q6ZR08 3092 aa11.04□□□□□ -0.64
CACNA1A-227ENST00000636549 KRTAP1-1Q07627 177 aa11.04□□□□□ -0.64
CACNA1A-227ENST00000636549 M0QZ58 72 aa11.03□□□□□ -0.64
CACNA1A-227ENST00000636549 H3BS24 57 aa11.03□□□□□ -0.64
CACNA1A-227ENST00000636549 ZCCHC13Q8WW36 166 aaKnown RBP11.03□□□□□ -0.64
CACNA1A-227ENST00000636549 FASNP49327 2511 aaKnown RBP11.01□□□□□ -0.65
CACNA1A-227ENST00000636549 BPTFQ12830 3046 aa10.98□□□□□ -0.65
CACNA1A-227ENST00000636549 SEC61BP60468 96 aaKnown RBP10.97□□□□□ -0.65
CACNA1A-227ENST00000636549 USP9YO00507 2555 aaPredicted RBP10.97□□□□□ -0.65
CACNA1A-227ENST00000636549 CEP295Q9C0D2 2601 aa10.95□□□□□ -0.66
CACNA1A-227ENST00000636549 C5orf42Q9H799 3197 aa10.94□□□□□ -0.66
CACNA1A-227ENST00000636549 KLKP1Q107X0 134 aa10.93□□□□□ -0.66
CACNA1A-227ENST00000636549 KRTAP10-2P60368 255 aa10.93□□□□□ -0.66
CACNA1A-227ENST00000636549 ADM2Q7Z4H4 148 aa10.92□□□□□ -0.66
CACNA1A-227ENST00000636549 FAM229BQ4G0N7 80 aa10.91□□□□□ -0.66
CACNA1A-227ENST00000636549 KRTAP10-1P60331 282 aa10.9□□□□□ -0.67
CACNA1A-227ENST00000636549 KLK9Q2XQG4 91 aa10.9□□□□□ -0.67
CACNA1A-227ENST00000636549 DMAC1Q96GE9 116 aa10.88□□□□□ -0.67
CACNA1A-227ENST00000636549 SPATA8Q6RVD6 105 aa10.85□□□□□ -0.67
CACNA1A-227ENST00000636549 Q5W150 140 aa10.85□□□□□ -0.67
CACNA1A-227ENST00000636549 SPANXA2-OT1Q8N9U9 137 aa10.84□□□□□ -0.67
CACNA1A-227ENST00000636549 USP24Q9UPU5 2620 aa10.82□□□□□ -0.68
CACNA1A-227ENST00000636549 PLAC8Q9NZF1 115 aa10.79□□□□□ -0.68
CACNA1A-227ENST00000636549 CEP350Q5VT06 3117 aa10.79□□□□□ -0.68
CACNA1A-227ENST00000636549 A0A0A0MQY5 61 aa10.78□□□□□ -0.68
CACNA1A-227ENST00000636549 MMP24-AS1A0A0U1RRL7 71 aa10.75□□□□□ -0.69
CACNA1A-227ENST00000636549 LCE6AA0A183 80 aa10.73□□□□□ -0.69
CACNA1A-227ENST00000636549 OCR1Q9BZK8 76 aa10.73□□□□□ -0.69
CACNA1A-227ENST00000636549 KRTAP1-5Q9BYS1 174 aa10.72□□□□□ -0.69
CACNA1A-227ENST00000636549 Q8NDZ9 215 aa10.7□□□□□ -0.7
CACNA1A-227ENST00000636549 FP248Q71RG6 208 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms