RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 IGLV7-46A0A075B6I9 117 aa10.93□□□□□ -0.66
CLN6-213ENST00000636212 A0A0J9YXY3 114 aa10.93□□□□□ -0.66
CLN6-213ENST00000636212 C5orf52A6NGY3 159 aa10.93□□□□□ -0.66
CLN6-213ENST00000636212 SNRPEP62304 92 aaKnown RBP10.93□□□□□ -0.66
CLN6-213ENST00000636212 A0A0U1RQV1 116 aa10.92□□□□□ -0.66
CLN6-213ENST00000636212 NPC2P61916 151 aa10.92□□□□□ -0.66
CLN6-213ENST00000636212 JOSD1Q15040 202 aaPredicted RBP10.92□□□□□ -0.66
CLN6-213ENST00000636212 GAGE2AQ6NT46 116 aa10.92□□□□□ -0.66
CLN6-213ENST00000636212 CDIP1Q9H305 208 aa10.92□□□□□ -0.66
CLN6-213ENST00000636212 TRAV23DV6A0A075B6W5 121 aa10.91□□□□□ -0.66
CLN6-213ENST00000636212 Q8NBF4 154 aa10.91□□□□□ -0.66
CLN6-213ENST00000636212 IGLV6-57P01721 117 aa10.9□□□□□ -0.66
CLN6-213ENST00000636212 TPRXLQ17RH7 258 aa10.9□□□□□ -0.66
CLN6-213ENST00000636212 Q6ZRX8 168 aa10.9□□□□□ -0.66
CLN6-213ENST00000636212 HINT1P49773 126 aaPredicted RBP10.89□□□□□ -0.67
CLN6-213ENST00000636212 LINC00483Q53H64 154 aa10.89□□□□□ -0.67
CLN6-213ENST00000636212 ATOH7Q8N100 152 aa10.89□□□□□ -0.67
CLN6-213ENST00000636212 ADAMTSL4-AS1Q5T5F5 129 aa10.88□□□□□ -0.67
CLN6-213ENST00000636212 ZNF815PA8K554 130 aa10.87□□□□□ -0.67
CLN6-213ENST00000636212 SPINK1P00995 79 aa10.87□□□□□ -0.67
CLN6-213ENST00000636212 IGLV9-49A0A0B4J1Y8 123 aa10.86□□□□□ -0.67
CLN6-213ENST00000636212 ZNF73O43830 326 aaPredicted RBP10.86□□□□□ -0.67
CLN6-213ENST00000636212 TIMM17BO60830 172 aa10.86□□□□□ -0.67
CLN6-213ENST00000636212 ANKRD39Q53RE8 183 aa10.86□□□□□ -0.67
CLN6-213ENST00000636212 SOSTDC1Q6X4U4 206 aa10.86□□□□□ -0.67
CLN6-213ENST00000636212 FP248Q71RG6 208 aaPredicted RBP10.86□□□□□ -0.67
CLN6-213ENST00000636212 Q9BRP9 147 aa10.86□□□□□ -0.67
CLN6-213ENST00000636212 ERC2-IT1O76042 136 aa10.85□□□□□ -0.67
CLN6-213ENST00000636212 SPANXCQ9NY87 97 aa10.85□□□□□ -0.67
CLN6-213ENST00000636212 MOBPQ13875 183 aa10.84□□□□□ -0.67
CLN6-213ENST00000636212 SSBP3-AS1Q7Z2R9 100 aa10.84□□□□□ -0.67
CLN6-213ENST00000636212 OR13C6PQ8NH95 151 aa10.84□□□□□ -0.67
CLN6-213ENST00000636212 LINC00308Q8TCZ7 52 aa10.83□□□□□ -0.68
CLN6-213ENST00000636212 TTTY13Q9BZ97 58 aa10.83□□□□□ -0.68
CLN6-213ENST00000636212 LITAFQ99732 161 aa10.82□□□□□ -0.68
CLN6-213ENST00000636212 HSBP1L1C9JCN9 74 aa10.81□□□□□ -0.68
CLN6-213ENST00000636212 EIF4EBP3O60516 100 aaPredicted RBP10.81□□□□□ -0.68
CLN6-213ENST00000636212 C9orf153Q5TBE3 101 aa10.79□□□□□ -0.68
CLN6-213ENST00000636212 SCGB1D4Q6XE38 83 aa10.79□□□□□ -0.68
CLN6-213ENST00000636212 LINC00518Q8N0U6 118 aa10.79□□□□□ -0.68
CLN6-213ENST00000636212 SCGB1D1O95968 90 aa10.78□□□□□ -0.68
CLN6-213ENST00000636212 RPS29P62273 56 aaKnown RBP10.78□□□□□ -0.68
CLN6-213ENST00000636212 SPANXDQ9BXN6 97 aa10.78□□□□□ -0.68
CLN6-213ENST00000636212 PCP2Q8IVA1 136 aa10.77□□□□□ -0.69
CLN6-213ENST00000636212 COPS9Q8WXC6 57 aa10.77□□□□□ -0.69
CLN6-213ENST00000636212 DHRS4-AS1Q9P1J3 65 aa10.76□□□□□ -0.69
CLN6-213ENST00000636212 SLC25A34Q6PIV7 304 aa10.75□□□□□ -0.69
CLN6-213ENST00000636212 TMA7Q9Y2S6 64 aaKnown RBP10.74□□□□□ -0.69
CLN6-213ENST00000636212 SLC25A20O43772 301 aa10.73□□□□□ -0.69
CLN6-213ENST00000636212 ST20-AS1Q8NBB2 130 aa10.73□□□□□ -0.69
CLN6-213ENST00000636212 Q6ZVH6 145 aa10.72□□□□□ -0.69
CLN6-213ENST00000636212 COX7BP24311 80 aa10.71□□□□□ -0.69
CLN6-213ENST00000636212 IFITM1P13164 125 aa10.7□□□□□ -0.7
CLN6-213ENST00000636212 Q8N377 158 aa10.7□□□□□ -0.7
CLN6-213ENST00000636212 KRTAP13-3Q3SY46 172 aa10.69□□□□□ -0.7
CLN6-213ENST00000636212 LAMTOR3Q9UHA4 124 aa10.69□□□□□ -0.7
CLN6-213ENST00000636212 ELOF1P60002 83 aaKnown RBP10.68□□□□□ -0.7
CLN6-213ENST00000636212 C6orf99Q4VX62 202 aa10.68□□□□□ -0.7
CLN6-213ENST00000636212 SPRR1BP22528 89 aa10.67□□□□□ -0.7
CLN6-213ENST00000636212 COX8AP10176 69 aa10.66□□□□□ -0.7
CLN6-213ENST00000636212 TAL2Q16559 108 aa10.66□□□□□ -0.7
CLN6-213ENST00000636212 VAMP8Q9BV40 100 aa10.66□□□□□ -0.7
CLN6-213ENST00000636212 MUC2Q02817 5179 aa10.66□□□□□ -0.7
CLN6-213ENST00000636212 A6NDN8 102 aa10.65□□□□□ -0.7
CLN6-213ENST00000636212 TRBV7-6A0A0J9YX20 115 aa10.64□□□□□ -0.71
CLN6-213ENST00000636212 DLEU1O43261 78 aa10.64□□□□□ -0.71
CLN6-213ENST00000636212 LIMD2Q9BT23 127 aa10.64□□□□□ -0.71
CLN6-213ENST00000636212 SPATA45Q537H7 98 aa10.63□□□□□ -0.71
CLN6-213ENST00000636212 PAM16Q9Y3D7 125 aa10.63□□□□□ -0.71
CLN6-213ENST00000636212 DEFB105AQ8NG35 78 aa10.62□□□□□ -0.71
CLN6-213ENST00000636212 A0A1B0GWB2 263 aa10.61□□□□□ -0.71
CLN6-213ENST00000636212 SEC61BP60468 96 aaKnown RBP10.61□□□□□ -0.71
CLN6-213ENST00000636212 PYY3Q5JQD4 70 aa10.61□□□□□ -0.71
CLN6-213ENST00000636212 MUSTN1Q8IVN3 82 aa10.61□□□□□ -0.71
CLN6-213ENST00000636212 TEX49A0A1B0GTD5 131 aa10.6□□□□□ -0.71
CLN6-213ENST00000636212 TRAV13-2A0A0B4J235 113 aa10.59□□□□□ -0.71
CLN6-213ENST00000636212 ASB16-AS1Q495Z4 193 aa10.59□□□□□ -0.71
CLN6-213ENST00000636212 HRCT1Q6UXD1 115 aa10.59□□□□□ -0.71
CLN6-213ENST00000636212 A4D1N5 150 aa10.58□□□□□ -0.72
CLN6-213ENST00000636212 Q1RN00 199 aa10.57□□□□□ -0.72
CLN6-213ENST00000636212 PRO1933Q9H354 126 aa10.57□□□□□ -0.72
CLN6-213ENST00000636212 NHP2Q9NX24 153 aaKnown RBP10.57□□□□□ -0.72
CLN6-213ENST00000636212 C14orf144Q96I85 54 aa10.56□□□□□ -0.72
CLN6-213ENST00000636212 CD164Q04900 197 aa10.54□□□□□ -0.72
CLN6-213ENST00000636212 HIGD1BQ9P298 99 aa10.54□□□□□ -0.72
CLN6-213ENST00000636212 MUC17Q685J3 4493 aa10.54□□□□□ -0.72
CLN6-213ENST00000636212 H7C2G1 150 aa10.53□□□□□ -0.72
CLN6-213ENST00000636212 HIST1H4GQ99525 98 aa10.53□□□□□ -0.72
CLN6-213ENST00000636212 VAMP3Q15836 100 aa10.52□□□□□ -0.73
CLN6-213ENST00000636212 C2orf91Q6ZV80 131 aa10.51□□□□□ -0.73
CLN6-213ENST00000636212 XP32Q5T750 250 aa10.5□□□□□ -0.73
CLN6-213ENST00000636212 LCE2AQ5TA79 106 aaPredicted RBP10.5□□□□□ -0.73
CLN6-213ENST00000636212 SMIM11BQ8TCY0 68 aa10.5□□□□□ -0.73
CLN6-213ENST00000636212 IGLV5-48A0A075B6I7 105 aa10.49□□□□□ -0.73
CLN6-213ENST00000636212 KRTAP9-2Q9BYQ4 174 aa10.48□□□□□ -0.73
CLN6-213ENST00000636212 SMIM29Q86T20 159 aa10.46□□□□□ -0.73
CLN6-213ENST00000636212 F8WEM9 126 aa10.45□□□□□ -0.74
CLN6-213ENST00000636212 LINC01547P58512 204 aaPredicted RBP10.45□□□□□ -0.74
CLN6-213ENST00000636212 FAT4Q6V0I7 4981 aa10.43□□□□□ -0.74
CLN6-213ENST00000636212 Q5XG85 94 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms