RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 PIEZO1Q92508 2521 aa11.47□□□□□ -0.57
CACNA1A-215ENST00000635727 TLX1NBP0CAT3 122 aa11.46□□□□□ -0.57
CACNA1A-215ENST00000635727 H3BNG1 76 aa11.46□□□□□ -0.58
CACNA1A-215ENST00000635727 IGF2RP11717 2491 aa11.46□□□□□ -0.58
CACNA1A-215ENST00000635727 ABCA12Q86UK0 2595 aa11.46□□□□□ -0.58
CACNA1A-215ENST00000635727 PLA2G2DQ9UNK4 145 aa11.45□□□□□ -0.58
CACNA1A-215ENST00000635727 LINC00528Q8N1L1 170 aa11.45□□□□□ -0.58
CACNA1A-215ENST00000635727 K7EIL1 84 aa11.45□□□□□ -0.58
CACNA1A-215ENST00000635727 COX8CQ7Z4L0 72 aa11.44□□□□□ -0.58
CACNA1A-215ENST00000635727 FAM104AQ969W3 186 aa11.44□□□□□ -0.58
CACNA1A-215ENST00000635727 ERC2-IT1O76042 136 aa11.44□□□□□ -0.58
CACNA1A-215ENST00000635727 PRR26Q8N8Z3 221 aa11.42□□□□□ -0.58
CACNA1A-215ENST00000635727 A0A087WTM6 91 aa11.41□□□□□ -0.58
CACNA1A-215ENST00000635727 PSORS1C2Q9UIG4 136 aa11.4□□□□□ -0.58
CACNA1A-215ENST00000635727 CD164Q04900 197 aa11.4□□□□□ -0.58
CACNA1A-215ENST00000635727 CYP4F30PQ9H0H9 118 aa11.4□□□□□ -0.59
CACNA1A-215ENST00000635727 Q8N377 158 aa11.38□□□□□ -0.59
CACNA1A-215ENST00000635727 IGLV7-43P04211 117 aa11.38□□□□□ -0.59
CACNA1A-215ENST00000635727 CASC10Q5T4H9 136 aa11.36□□□□□ -0.59
CACNA1A-215ENST00000635727 RPS28P62857 69 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-215ENST00000635727 ANKRD17O75179 2603 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-215ENST00000635727 A0A1B0GW54 56 aa11.35□□□□□ -0.59
CACNA1A-215ENST00000635727 LINC01546A6NGU7 62 aa11.35□□□□□ -0.59
CACNA1A-215ENST00000635727 COL4A2P08572 1712 aa11.34□□□□□ -0.59
CACNA1A-215ENST00000635727 KTN1-AS1Q86SY8 53 aa11.33□□□□□ -0.6
CACNA1A-215ENST00000635727 PRO0461Q9UI25 63 aa11.33□□□□□ -0.6
CACNA1A-215ENST00000635727 BPTFQ12830 3046 aa11.33□□□□□ -0.6
CACNA1A-215ENST00000635727 LCA10Q71F78 164 aa11.3□□□□□ -0.6
CACNA1A-215ENST00000635727 KCNQ1DNQ9H478 68 aa11.3□□□□□ -0.6
CACNA1A-215ENST00000635727 IGLV7-46A0A075B6I9 117 aa11.29□□□□□ -0.6
CACNA1A-215ENST00000635727 SETD2Q9BYW2 2564 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-215ENST00000635727 FLG2Q5D862 2391 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-215ENST00000635727 EIF4EBP3O60516 100 aaPredicted RBP11.27□□□□□ -0.61
CACNA1A-215ENST00000635727 C9orf163Q8N9P6 203 aa11.27□□□□□ -0.61
CACNA1A-215ENST00000635727 Q1T7F1 81 aa11.25□□□□□ -0.61
CACNA1A-215ENST00000635727 KRTAP10-3P60369 221 aa11.23□□□□□ -0.61
CACNA1A-215ENST00000635727 NCOR2Q9Y618 2525 aa11.23□□□□□ -0.61
CACNA1A-215ENST00000635727 ZNF462Q96JM2 2506 aa11.22□□□□□ -0.61
CACNA1A-215ENST00000635727 LITAFQ99732 161 aa11.21□□□□□ -0.61
CACNA1A-215ENST00000635727 LINC00612Q8N6U2 182 aa11.21□□□□□ -0.62
CACNA1A-215ENST00000635727 S4R3F8 94 aa11.19□□□□□ -0.62
CACNA1A-215ENST00000635727 PKD1L2Q7Z442 2459 aa11.19□□□□□ -0.62
CACNA1A-215ENST00000635727 SPRR4Q96PI1 79 aa11.18□□□□□ -0.62
CACNA1A-215ENST00000635727 A0A1B0GU33 70 aa11.17□□□□□ -0.62
CACNA1A-215ENST00000635727 TNP2Q05952 138 aa11.16□□□□□ -0.62
CACNA1A-215ENST00000635727 UTRNP46939 3433 aa11.12□□□□□ -0.63
CACNA1A-215ENST00000635727 Q5VSD8 79 aa11.11□□□□□ -0.63
CACNA1A-215ENST00000635727 SPINK7P58062 85 aa11.1□□□□□ -0.63
CACNA1A-215ENST00000635727 USP9XQ93008 2570 aaPredicted RBP11.1□□□□□ -0.63
CACNA1A-215ENST00000635727 H7BZZ5 65 aa11.09□□□□□ -0.63
CACNA1A-215ENST00000635727 PRAC1Q96KF2 57 aa11.09□□□□□ -0.63
CACNA1A-215ENST00000635727 SPTBN4Q9H254 2564 aa11.07□□□□□ -0.64
CACNA1A-215ENST00000635727 H1FX-AS1Q4G0G2 97 aa11.06□□□□□ -0.64
CACNA1A-215ENST00000635727 DNAH12Q6ZR08 3092 aa11.05□□□□□ -0.64
CACNA1A-215ENST00000635727 H3BS24 57 aa11.04□□□□□ -0.64
CACNA1A-215ENST00000635727 HRES1P13985 223 aa11.04□□□□□ -0.64
CACNA1A-215ENST00000635727 R4GN34 69 aa11.04□□□□□ -0.64
CACNA1A-215ENST00000635727 ANKRD11Q6UB99 2663 aaPredicted RBP11.04□□□□□ -0.64
CACNA1A-215ENST00000635727 A0A1W2PNM2 257 aa11.03□□□□□ -0.64
CACNA1A-215ENST00000635727 C19orf73Q9NVV2 129 aa11.02□□□□□ -0.65
CACNA1A-215ENST00000635727 GIG44P09565 113 aaPredicted RBP11□□□□□ -0.65
CACNA1A-215ENST00000635727 KLKP1Q107X0 134 aa10.99□□□□□ -0.65
CACNA1A-215ENST00000635727 A0A0A0MQY5 61 aa10.99□□□□□ -0.65
CACNA1A-215ENST00000635727 CSAG1Q6PB30 78 aa10.99□□□□□ -0.65
CACNA1A-215ENST00000635727 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.98□□□□□ -0.65
CACNA1A-215ENST00000635727 PRR34Q9NV39 138 aa10.97□□□□□ -0.65
CACNA1A-215ENST00000635727 PLAC4Q8WY50 150 aa10.97□□□□□ -0.65
CACNA1A-215ENST00000635727 USP24Q9UPU5 2620 aa10.96□□□□□ -0.66
CACNA1A-215ENST00000635727 MTORP42345 2549 aa10.95□□□□□ -0.66
CACNA1A-215ENST00000635727 C5orf42Q9H799 3197 aa10.95□□□□□ -0.66
CACNA1A-215ENST00000635727 POLQO75417 2590 aa10.94□□□□□ -0.66
CACNA1A-215ENST00000635727 FAM229BQ4G0N7 80 aa10.92□□□□□ -0.66
CACNA1A-215ENST00000635727 CEP350Q5VT06 3117 aa10.89□□□□□ -0.67
CACNA1A-215ENST00000635727 Q8N9P0 234 aaPredicted RBP10.89□□□□□ -0.67
CACNA1A-215ENST00000635727 PCNTO95613 3336 aa10.88□□□□□ -0.67
CACNA1A-215ENST00000635727 SPANXA2-OT1Q8N9U9 137 aa10.87□□□□□ -0.67
CACNA1A-215ENST00000635727 M0QZ58 72 aa10.86□□□□□ -0.67
CACNA1A-215ENST00000635727 DMAC1Q96GE9 116 aa10.85□□□□□ -0.67
CACNA1A-215ENST00000635727 CNBPP62633 177 aaKnown RBP10.85□□□□□ -0.67
CACNA1A-215ENST00000635727 CHD8Q9HCK8 2581 aa10.84□□□□□ -0.67
CACNA1A-215ENST00000635727 ZCCHC13Q8WW36 166 aaKnown RBP10.82□□□□□ -0.68
CACNA1A-215ENST00000635727 USP9YO00507 2555 aaPredicted RBP10.81□□□□□ -0.68
CACNA1A-215ENST00000635727 PRRC2CQ9Y520 2896 aaKnown RBP10.81□□□□□ -0.68
CACNA1A-215ENST00000635727 ADM2Q7Z4H4 148 aa10.75□□□□□ -0.69
CACNA1A-215ENST00000635727 FASNP49327 2511 aaKnown RBP10.73□□□□□ -0.69
CACNA1A-215ENST00000635727 SPATA8Q6RVD6 105 aa10.73□□□□□ -0.69
CACNA1A-215ENST00000635727 C10orf142B7Z368 130 aa10.72□□□□□ -0.69
CACNA1A-215ENST00000635727 OCR1Q9BZK8 76 aa10.7□□□□□ -0.7
CACNA1A-215ENST00000635727 XIRP2A4UGR9 3374 aa10.7□□□□□ -0.7
CACNA1A-215ENST00000635727 Q75L30 129 aa10.68□□□□□ -0.7
CACNA1A-215ENST00000635727 SEC61BP60468 96 aaKnown RBP10.68□□□□□ -0.7
CACNA1A-215ENST00000635727 Q5W150 140 aa10.68□□□□□ -0.7
CACNA1A-215ENST00000635727 FP248Q71RG6 208 aaPredicted RBP10.66□□□□□ -0.7
CACNA1A-215ENST00000635727 C20orf166-AS1Q96NR2 134 aa10.66□□□□□ -0.7
CACNA1A-215ENST00000635727 ROMO1P60602 79 aa10.65□□□□□ -0.7
CACNA1A-215ENST00000635727 KLK9Q2XQG4 91 aa10.65□□□□□ -0.71
CACNA1A-215ENST00000635727 MMP24-AS1A0A0U1RRL7 71 aa10.58□□□□□ -0.72
CACNA1A-215ENST00000635727 LINC01558Q9Y6Z2 57 aa10.57□□□□□ -0.72
CACNA1A-215ENST00000635727 RPL37P61927 97 aaKnown RBP10.56□□□□□ -0.72
CACNA1A-215ENST00000635727 CEP295Q9C0D2 2601 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms