RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 USP9YO00507 2555 aaPredicted RBP5.89□□□□□ -1.47
PATJ-216ENST00000635214 ABCA12Q86UK0 2595 aa5.89□□□□□ -1.47
PATJ-216ENST00000635214 EPM2AB3EWF7 344 aa5.88□□□□□ -1.47
PATJ-216ENST00000635214 CDC42SE1Q9NRR8 79 aa5.88□□□□□ -1.47
PATJ-216ENST00000635214 CRIPTQ9P021 101 aa5.88□□□□□ -1.47
PATJ-216ENST00000635214 C1orf134Q5TEV5 83 aa5.88□□□□□ -1.47
PATJ-216ENST00000635214 SPACA4Q8TDM5 124 aa5.88□□□□□ -1.47
PATJ-216ENST00000635214 KCNQ1DNQ9H478 68 aa5.87□□□□□ -1.47
PATJ-216ENST00000635214 BRCA2P51587 3418 aa5.87□□□□□ -1.47
PATJ-216ENST00000635214 C16orf90A8MZG2 172 aa5.87□□□□□ -1.47
PATJ-216ENST00000635214 F8P00451 2351 aa5.85□□□□□ -1.47
PATJ-216ENST00000635214 EIF4EBP3O60516 100 aaPredicted RBP5.85□□□□□ -1.47
PATJ-216ENST00000635214 Q1T7F1 81 aa5.85□□□□□ -1.47
PATJ-216ENST00000635214 JMJD1CQ15652 2540 aa5.85□□□□□ -1.47
PATJ-216ENST00000635214 SETD2Q9BYW2 2564 aaPredicted RBP5.84□□□□□ -1.47
PATJ-216ENST00000635214 CHD6Q8TD26 2715 aa5.84□□□□□ -1.47
PATJ-216ENST00000635214 WWC2-AS2Q96NR7 200 aa5.84□□□□□ -1.47
PATJ-216ENST00000635214 C8orf17Q9NRJ1 99 aa5.84□□□□□ -1.47
PATJ-216ENST00000635214 PHF5AQ7RTV0 110 aaKnown RBP5.83□□□□□ -1.48
PATJ-216ENST00000635214 LINC00612Q8N6U2 182 aa5.83□□□□□ -1.48
PATJ-216ENST00000635214 IGLV1-50A0A075B6I6 118 aa5.82□□□□□ -1.48
PATJ-216ENST00000635214 IGFL1Q6UW32 110 aa5.82□□□□□ -1.48
PATJ-216ENST00000635214 HECTD1Q9ULT8 2610 aa5.81□□□□□ -1.48
PATJ-216ENST00000635214 Q8NAQ8 132 aa5.81□□□□□ -1.48
PATJ-216ENST00000635214 CSNK1G2-AS1Q8NCQ2 148 aa5.81□□□□□ -1.48
PATJ-216ENST00000635214 AKAP13Q12802 2813 aa5.81□□□□□ -1.48
PATJ-216ENST00000635214 PLA2G1BP04054 148 aaKnown RBP5.8□□□□□ -1.48
PATJ-216ENST00000635214 SZT2Q5T011 3432 aa5.8□□□□□ -1.48
PATJ-216ENST00000635214 A0A1B0GVX0 72 aa5.8□□□□□ -1.48
PATJ-216ENST00000635214 Q8N377 158 aa5.8□□□□□ -1.48
PATJ-216ENST00000635214 OBSCN-AS1Q96MR7 158 aa5.8□□□□□ -1.48
PATJ-216ENST00000635214 FLNBO75369 2602 aaKnown RBP5.8□□□□□ -1.48
PATJ-216ENST00000635214 COL6A3P12111 3177 aa5.8□□□□□ -1.48
PATJ-216ENST00000635214 CR1P17927 2039 aa5.78□□□□□ -1.48
PATJ-216ENST00000635214 Q96NJ1 140 aa5.78□□□□□ -1.48
PATJ-216ENST00000635214 RBM12B-AS1Q9P1G2 102 aa5.78□□□□□ -1.48
PATJ-216ENST00000635214 UBR5O95071 2799 aaPredicted RBP5.77□□□□□ -1.49
PATJ-216ENST00000635214 DNAH10OSP0CZ25 163 aa5.77□□□□□ -1.49
PATJ-216ENST00000635214 TYMSOSQ8TAI1 123 aa5.76□□□□□ -1.49
PATJ-216ENST00000635214 OCR1Q9BZK8 76 aa5.76□□□□□ -1.49
PATJ-216ENST00000635214 C5orf42Q9H799 3197 aa5.76□□□□□ -1.49
PATJ-216ENST00000635214 PRR34Q9NV39 138 aa5.76□□□□□ -1.49
PATJ-216ENST00000635214 C9orf129Q5T035 196 aaKnown RBP5.76□□□□□ -1.49
PATJ-216ENST00000635214 C19orf73Q9NVV2 129 aa5.76□□□□□ -1.49
PATJ-216ENST00000635214 PLA2G2DQ9UNK4 145 aa5.76□□□□□ -1.49
PATJ-216ENST00000635214 APLNQ9ULZ1 77 aa5.75□□□□□ -1.49
PATJ-216ENST00000635214 UNC79Q9P2D8 2635 aa5.74□□□□□ -1.49
PATJ-216ENST00000635214 Q75L30 129 aa5.74□□□□□ -1.49
PATJ-216ENST00000635214 BPTFQ12830 3046 aa5.74□□□□□ -1.49
PATJ-216ENST00000635214 A0A1W2PNM2 257 aa5.73□□□□□ -1.49
PATJ-216ENST00000635214 FAM168BA1KXE4 195 aa5.73□□□□□ -1.49
PATJ-216ENST00000635214 LINC01554Q52M75 96 aa5.73□□□□□ -1.49
PATJ-216ENST00000635214 Q5XG85 94 aa5.73□□□□□ -1.49
PATJ-216ENST00000635214 FAM104AQ969W3 186 aa5.73□□□□□ -1.49
PATJ-216ENST00000635214 LINC00588Q9Y4M8 146 aa5.73□□□□□ -1.49
PATJ-216ENST00000635214 TLX1NBP0CAT3 122 aa5.73□□□□□ -1.49
PATJ-216ENST00000635214 IGLV5-48A0A075B6I7 105 aa5.73□□□□□ -1.49
PATJ-216ENST00000635214 RTL8CO15255 209 aa5.73□□□□□ -1.49
PATJ-216ENST00000635214 C15orf56Q8N910 161 aa5.72□□□□□ -1.49
PATJ-216ENST00000635214 NBDYA0A0U1RRE5 68 aa5.72□□□□□ -1.49
PATJ-216ENST00000635214 CHTF8P0CG12 524 aa5.72□□□□□ -1.49
PATJ-216ENST00000635214 WDR87Q6ZQQ6 2873 aa5.71□□□□□ -1.49
PATJ-216ENST00000635214 DSCR10P59022 87 aa5.71□□□□□ -1.5
PATJ-216ENST00000635214 GIG44P09565 113 aaPredicted RBP5.7□□□□□ -1.5
PATJ-216ENST00000635214 LUZP6Q538Z0 58 aa5.7□□□□□ -1.5
PATJ-216ENST00000635214 PRUNE2Q8WUY3 3088 aa5.7□□□□□ -1.5
PATJ-216ENST00000635214 IGLV7-46A0A075B6I9 117 aa5.69□□□□□ -1.5
PATJ-216ENST00000635214 H3BS24 57 aa5.69□□□□□ -1.5
PATJ-216ENST00000635214 SPTBN5Q9NRC6 3674 aaKnown RBP5.69□□□□□ -1.5
PATJ-216ENST00000635214 KRTAP10-3P60369 221 aa5.69□□□□□ -1.5
PATJ-216ENST00000635214 CFAP46Q8IYW2 2715 aa5.68□□□□□ -1.5
PATJ-216ENST00000635214 CDH23Q9H251 3354 aa5.68□□□□□ -1.5
PATJ-216ENST00000635214 K7EIL1 84 aa5.68□□□□□ -1.5
PATJ-216ENST00000635214 LINC01558Q9Y6Z2 57 aa5.67□□□□□ -1.5
PATJ-216ENST00000635214 FP248Q71RG6 208 aaPredicted RBP5.67□□□□□ -1.5
PATJ-216ENST00000635214 ZNF861PO60384 105 aa5.67□□□□□ -1.5
PATJ-216ENST00000635214 UNC80Q8N2C7 3258 aa5.67□□□□□ -1.5
PATJ-216ENST00000635214 C9orf163Q8N9P6 203 aa5.66□□□□□ -1.5
PATJ-216ENST00000635214 MTORP42345 2549 aa5.66□□□□□ -1.5
PATJ-216ENST00000635214 ACANP16112 2415 aa5.66□□□□□ -1.5
PATJ-216ENST00000635214 PRR26Q8N8Z3 221 aa5.66□□□□□ -1.5
PATJ-216ENST00000635214 Q8N9P0 234 aaPredicted RBP5.66□□□□□ -1.5
PATJ-216ENST00000635214 REV3LO60673 3130 aa5.66□□□□□ -1.5
PATJ-216ENST00000635214 ZNF575Q86XF7 245 aa5.65□□□□□ -1.51
PATJ-216ENST00000635214 SPRR4Q96PI1 79 aa5.65□□□□□ -1.51
PATJ-216ENST00000635214 GCN1Q92616 2671 aaKnown RBP5.65□□□□□ -1.51
PATJ-216ENST00000635214 LAMA2P24043 3122 aaKnown RBP5.64□□□□□ -1.51
PATJ-216ENST00000635214 A0A0G2JQZ4 141 aa5.63□□□□□ -1.51
PATJ-216ENST00000635214 A0A1W2PNN7 141 aa5.63□□□□□ -1.51
PATJ-216ENST00000635214 IGLV5-37A0A075B6J1 123 aa5.62□□□□□ -1.51
PATJ-216ENST00000635214 KRTAP10-11P60412 298 aa5.61□□□□□ -1.51
PATJ-216ENST00000635214 DSPP15924 2871 aaKnown RBP5.6□□□□□ -1.51
PATJ-216ENST00000635214 FAM229BQ4G0N7 80 aa5.6□□□□□ -1.51
PATJ-216ENST00000635214 LINC00304Q8N9R0 145 aa5.6□□□□□ -1.51
PATJ-216ENST00000635214 Q5VV11 94 aa5.59□□□□□ -1.51
PATJ-216ENST00000635214 A0A1B0GU33 70 aa5.59□□□□□ -1.52
PATJ-216ENST00000635214 DMAC1Q96GE9 116 aa5.58□□□□□ -1.52
PATJ-216ENST00000635214 CYSTM1Q9H1C7 97 aa5.58□□□□□ -1.52
PATJ-216ENST00000635214 ITPR3Q14573 2671 aa5.58□□□□□ -1.52
PATJ-216ENST00000635214 A0A0D9SG42 100 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms