RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 SDIM1Q6ZPB5 146 aa8.19□□□□□ -1.1
SYNGAP1-207ENST00000628646 Q8NDZ9 215 aa8.18□□□□□ -1.1
SYNGAP1-207ENST00000628646 IMUPQ9GZP8 106 aa8.18□□□□□ -1.1
SYNGAP1-207ENST00000628646 LINC00474Q9P2X8 69 aa8.18□□□□□ -1.1
SYNGAP1-207ENST00000628646 C6orf48Q9UBA6 75 aa8.18□□□□□ -1.1
SYNGAP1-207ENST00000628646 TRBV10-3A0A0K0K1G6 114 aa8.17□□□□□ -1.1
SYNGAP1-207ENST00000628646 HIST1H4AP62805 103 aaKnown RBP8.17□□□□□ -1.1
SYNGAP1-207ENST00000628646 C9orf129Q5T035 196 aaKnown RBP8.17□□□□□ -1.1
SYNGAP1-207ENST00000628646 C15orf56Q8N910 161 aa8.17□□□□□ -1.1
SYNGAP1-207ENST00000628646 C7orf33Q8WU49 177 aa8.17□□□□□ -1.1
SYNGAP1-207ENST00000628646 C5orf47Q569G3 176 aa8.16□□□□□ -1.1
SYNGAP1-207ENST00000628646 Q6Q795 121 aa8.16□□□□□ -1.1
SYNGAP1-207ENST00000628646 LINC00575Q6W349 94 aa8.15□□□□□ -1.1
SYNGAP1-207ENST00000628646 Q6ZQY7 126 aa8.15□□□□□ -1.1
SYNGAP1-207ENST00000628646 SMCR5Q8TEV8 140 aa8.15□□□□□ -1.11
SYNGAP1-207ENST00000628646 CHTF8P0CG12 524 aa8.14□□□□□ -1.11
SYNGAP1-207ENST00000628646 OBSCN-AS1Q96MR7 158 aa8.14□□□□□ -1.11
SYNGAP1-207ENST00000628646 DHRS4-AS1Q9P1J3 65 aa8.13□□□□□ -1.11
SYNGAP1-207ENST00000628646 TRBV7-6A0A0J9YX20 115 aa8.13□□□□□ -1.11
SYNGAP1-207ENST00000628646 UBE2AP49459 152 aa8.13□□□□□ -1.11
SYNGAP1-207ENST00000628646 RPL37AP8A6NKH3 93 aa8.13□□□□□ -1.11
SYNGAP1-207ENST00000628646 ATP5EP2Q5VTU8 51 aa8.13□□□□□ -1.11
SYNGAP1-207ENST00000628646 Q6ZR54 194 aa8.13□□□□□ -1.11
SYNGAP1-207ENST00000628646 HAMPP81172 84 aa8.12□□□□□ -1.11
SYNGAP1-207ENST00000628646 HUWE1Q7Z6Z7 4374 aaKnown RBP8.12□□□□□ -1.11
SYNGAP1-207ENST00000628646 LRCOL1A6NCL2 159 aa8.12□□□□□ -1.11
SYNGAP1-207ENST00000628646 CCKP06307 115 aa8.11□□□□□ -1.11
SYNGAP1-207ENST00000628646 DEFB105AQ8NG35 78 aa8.11□□□□□ -1.11
SYNGAP1-207ENST00000628646 LINC00167Q96N53 147 aa8.11□□□□□ -1.11
SYNGAP1-207ENST00000628646 A0A0U1RQV1 116 aa8.09□□□□□ -1.11
SYNGAP1-207ENST00000628646 LYSTQ99698 3801 aa8.09□□□□□ -1.11
SYNGAP1-207ENST00000628646 IGKV3D-7A0A0C4DH55 119 aa8.09□□□□□ -1.11
SYNGAP1-207ENST00000628646 TRBV7-7A0A0K0K1E9 115 aa8.09□□□□□ -1.11
SYNGAP1-207ENST00000628646 ATOX1O00244 68 aa8.09□□□□□ -1.11
SYNGAP1-207ENST00000628646 NDUFV3P56181 108 aaKnown RBP8.09□□□□□ -1.11
SYNGAP1-207ENST00000628646 KRTAP26-1Q6PEX3 210 aa8.09□□□□□ -1.11
SYNGAP1-207ENST00000628646 IGLV6-57P01721 117 aa8.09□□□□□ -1.12
SYNGAP1-207ENST00000628646 C9orf163Q8N9P6 203 aa8.09□□□□□ -1.12
SYNGAP1-207ENST00000628646 A0A096LNI7 61 aa8.08□□□□□ -1.12
SYNGAP1-207ENST00000628646 FAM236AA0A1B0GUQ0 79 aa8.08□□□□□ -1.12
SYNGAP1-207ENST00000628646 FAM236BA0A1B0GV22 79 aa8.08□□□□□ -1.12
SYNGAP1-207ENST00000628646 HIGD2AQ9BW72 106 aa8.08□□□□□ -1.12
SYNGAP1-207ENST00000628646 PRYO14603 147 aa8.08□□□□□ -1.12
SYNGAP1-207ENST00000628646 FAM19A1Q7Z5A9 133 aa8.07□□□□□ -1.12
SYNGAP1-207ENST00000628646 Q6JHZ5 121 aa8.07□□□□□ -1.12
SYNGAP1-207ENST00000628646 Q6ZRP5 223 aa8.07□□□□□ -1.12
SYNGAP1-207ENST00000628646 C9orf153Q5TBE3 101 aa8.06□□□□□ -1.12
SYNGAP1-207ENST00000628646 VPREB1P12018 145 aa8.06□□□□□ -1.12
SYNGAP1-207ENST00000628646 NREPQ16612 68 aa8.05□□□□□ -1.12
SYNGAP1-207ENST00000628646 HRCT1Q6UXD1 115 aa8.05□□□□□ -1.12
SYNGAP1-207ENST00000628646 CNBPP62633 177 aaKnown RBP8.03□□□□□ -1.12
SYNGAP1-207ENST00000628646 MRPL55Q7Z7F7 128 aaKnown RBP8.03□□□□□ -1.12
SYNGAP1-207ENST00000628646 ELOF1P60002 83 aaKnown RBP8.03□□□□□ -1.12
SYNGAP1-207ENST00000628646 COL7A1Q02388 2944 aa8.02□□□□□ -1.12
SYNGAP1-207ENST00000628646 TLX1NBP0CAT3 122 aa8.02□□□□□ -1.13
SYNGAP1-207ENST00000628646 SMR3BP02814 79 aaPredicted RBP8.02□□□□□ -1.13
SYNGAP1-207ENST00000628646 C1orf137Q5JT78 98 aa8.02□□□□□ -1.13
SYNGAP1-207ENST00000628646 PHF5AQ7RTV0 110 aaKnown RBP8.02□□□□□ -1.13
SYNGAP1-207ENST00000628646 FAM168BA1KXE4 195 aa8.01□□□□□ -1.13
SYNGAP1-207ENST00000628646 KRTAP10-2P60368 255 aa8.01□□□□□ -1.13
SYNGAP1-207ENST00000628646 DNAH9Q9NYC9 4486 aa8.01□□□□□ -1.13
SYNGAP1-207ENST00000628646 DNAH10Q8IVF4 4471 aa8.01□□□□□ -1.13
SYNGAP1-207ENST00000628646 PLA2G2DQ9UNK4 145 aa8□□□□□ -1.13
SYNGAP1-207ENST00000628646 DYNC2H1Q8NCM8 4307 aaKnown RBP7.99□□□□□ -1.13
SYNGAP1-207ENST00000628646 REG3GQ6UW15 175 aa7.99□□□□□ -1.13
SYNGAP1-207ENST00000628646 Q6ZRN7 208 aaPredicted RBP7.99□□□□□ -1.13
SYNGAP1-207ENST00000628646 LINC00846Q9NV44 126 aa7.98□□□□□ -1.13
SYNGAP1-207ENST00000628646 FAM229AH3BQW9 127 aa7.98□□□□□ -1.13
SYNGAP1-207ENST00000628646 SEC61GP60059 68 aa7.98□□□□□ -1.13
SYNGAP1-207ENST00000628646 PRKDCP78527 4128 aaKnown RBP7.97□□□□□ -1.13
SYNGAP1-207ENST00000628646 KCNQ1DNQ9H478 68 aa7.97□□□□□ -1.13
SYNGAP1-207ENST00000628646 LOC110117498A0A087WWA1 95 aa7.97□□□□□ -1.13
SYNGAP1-207ENST00000628646 DNAH7Q8WXX0 4024 aa7.96□□□□□ -1.13
SYNGAP1-207ENST00000628646 SERTAD4-AS1Q5TG53 156 aa7.96□□□□□ -1.14
SYNGAP1-207ENST00000628646 CSMD3Q7Z407 3707 aa7.95□□□□□ -1.14
SYNGAP1-207ENST00000628646 UQCRQO14949 82 aa7.95□□□□□ -1.14
SYNGAP1-207ENST00000628646 BPY2O14599 106 aa7.95□□□□□ -1.14
SYNGAP1-207ENST00000628646 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.95□□□□□ -1.14
SYNGAP1-207ENST00000628646 LINC00528Q8N1L1 170 aa7.94□□□□□ -1.14
SYNGAP1-207ENST00000628646 A0A1W2PNN7 141 aa7.94□□□□□ -1.14
SYNGAP1-207ENST00000628646 A0A1B0GW54 56 aa7.93□□□□□ -1.14
SYNGAP1-207ENST00000628646 PRLHP81277 87 aa7.93□□□□□ -1.14
SYNGAP1-207ENST00000628646 SCXQ7RTU7 201 aa7.93□□□□□ -1.14
SYNGAP1-207ENST00000628646 FLG2Q5D862 2391 aaPredicted RBP7.93□□□□□ -1.14
SYNGAP1-207ENST00000628646 J3KT08 172 aa7.92□□□□□ -1.14
SYNGAP1-207ENST00000628646 Q6ZQT0 140 aa7.92□□□□□ -1.14
SYNGAP1-207ENST00000628646 Q6ZRX8 168 aa7.92□□□□□ -1.14
SYNGAP1-207ENST00000628646 KRTAP10-1P60331 282 aa7.92□□□□□ -1.14
SYNGAP1-207ENST00000628646 C4orf26Q17RF5 130 aa7.92□□□□□ -1.14
SYNGAP1-207ENST00000628646 V9GYY9 64 aa7.92□□□□□ -1.14
SYNGAP1-207ENST00000628646 IGLV5-37A0A075B6J1 123 aa7.91□□□□□ -1.14
SYNGAP1-207ENST00000628646 C3orf22Q8N5N4 141 aa7.91□□□□□ -1.14
SYNGAP1-207ENST00000628646 IGLV1-50A0A075B6I6 118 aa7.9□□□□□ -1.14
SYNGAP1-207ENST00000628646 CIRBP-AS1Q8TBR5 109 aa7.9□□□□□ -1.14
SYNGAP1-207ENST00000628646 RPL37AP61513 92 aaKnown RBP7.9□□□□□ -1.15
SYNGAP1-207ENST00000628646 SERP2Q8N6R1 65 aa7.9□□□□□ -1.15
SYNGAP1-207ENST00000628646 Q6ZVQ6 151 aa7.89□□□□□ -1.15
SYNGAP1-207ENST00000628646 COX7CP15954 63 aa7.89□□□□□ -1.15
SYNGAP1-207ENST00000628646 BRK1Q8WUW1 75 aa7.88□□□□□ -1.15
SYNGAP1-207ENST00000628646 CDK2AP2O75956 126 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms