RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PRR4Q16378 134 aa13.02□□□□□ -0.33
SF1-220ENST00000626028 NPC2P61916 151 aa13.01□□□□□ -0.33
SF1-220ENST00000626028 SNRPEP62304 92 aaKnown RBP13□□□□□ -0.33
SF1-220ENST00000626028 LINC00483Q53H64 154 aa12.99□□□□□ -0.33
SF1-220ENST00000626028 SPAG11AQ6PDA7 123 aa12.99□□□□□ -0.33
SF1-220ENST00000626028 COPS9Q8WXC6 57 aa12.99□□□□□ -0.33
SF1-220ENST00000626028 PPDPFQ9H3Y8 114 aa12.99□□□□□ -0.33
SF1-220ENST00000626028 ZNF73O43830 326 aaPredicted RBP12.98□□□□□ -0.33
SF1-220ENST00000626028 LINC00518Q8N0U6 118 aa12.98□□□□□ -0.33
SF1-220ENST00000626028 HINT1P49773 126 aaPredicted RBP12.97□□□□□ -0.33
SF1-220ENST00000626028 C3orf22Q8N5N4 141 aa12.97□□□□□ -0.33
SF1-220ENST00000626028 SPANXDQ9BXN6 97 aa12.97□□□□□ -0.33
SF1-220ENST00000626028 SCGB1D4Q6XE38 83 aa12.96□□□□□ -0.33
SF1-220ENST00000626028 Q6ZVH6 145 aa12.96□□□□□ -0.33
SF1-220ENST00000626028 Q9BRP9 147 aa12.96□□□□□ -0.33
SF1-220ENST00000626028 TTTY13Q9BZ97 58 aa12.96□□□□□ -0.33
SF1-220ENST00000626028 C5orf52A6NGY3 159 aa12.95□□□□□ -0.34
SF1-220ENST00000626028 S100A2P29034 98 aa12.94□□□□□ -0.34
SF1-220ENST00000626028 IFITM1P13164 125 aa12.93□□□□□ -0.34
SF1-220ENST00000626028 ANKRD39Q53RE8 183 aa12.93□□□□□ -0.34
SF1-220ENST00000626028 HIST3H2BBQ8N257 126 aa12.93□□□□□ -0.34
SF1-220ENST00000626028 LPAP08519 4548 aa12.92□□□□□ -0.34
SF1-220ENST00000626028 ERC2-IT1O76042 136 aa12.91□□□□□ -0.34
SF1-220ENST00000626028 C4orf48Q5BLP8 95 aa12.91□□□□□ -0.34
SF1-220ENST00000626028 OR13C6PQ8NH95 151 aa12.91□□□□□ -0.34
SF1-220ENST00000626028 HIST1H2BLQ99880 126 aa12.91□□□□□ -0.34
SF1-220ENST00000626028 S100A6P06703 90 aa12.9□□□□□ -0.34
SF1-220ENST00000626028 GAGE2AQ6NT46 116 aa12.9□□□□□ -0.34
SF1-220ENST00000626028 ATOH7Q8N100 152 aa12.9□□□□□ -0.34
SF1-220ENST00000626028 RNF213Q63HN8 5207 aa12.89□□□□□ -0.35
SF1-220ENST00000626028 SSBP3-AS1Q7Z2R9 100 aa12.87□□□□□ -0.35
SF1-220ENST00000626028 PCP2Q8IVA1 136 aa12.86□□□□□ -0.35
SF1-220ENST00000626028 Q8NBF4 154 aa12.86□□□□□ -0.35
SF1-220ENST00000626028 DHRS4-AS1Q9P1J3 65 aa12.86□□□□□ -0.35
SF1-220ENST00000626028 SPINK1P00995 79 aa12.85□□□□□ -0.35
SF1-220ENST00000626028 TRBV7-6A0A0J9YX20 115 aa12.83□□□□□ -0.36
SF1-220ENST00000626028 HSBP1L1C9JCN9 74 aa12.83□□□□□ -0.36
SF1-220ENST00000626028 ELOF1P60002 83 aaKnown RBP12.81□□□□□ -0.36
SF1-220ENST00000626028 RPS29P62273 56 aaKnown RBP12.81□□□□□ -0.36
SF1-220ENST00000626028 MOBPQ13875 183 aa12.8□□□□□ -0.36
SF1-220ENST00000626028 TPRXLQ17RH7 258 aa12.8□□□□□ -0.36
SF1-220ENST00000626028 SLC25A34Q6PIV7 304 aa12.8□□□□□ -0.36
SF1-220ENST00000626028 RETNLBQ9BQ08 111 aa12.8□□□□□ -0.36
SF1-220ENST00000626028 IGLV9-49A0A0B4J1Y8 123 aa12.79□□□□□ -0.36
SF1-220ENST00000626028 COX7BP24311 80 aa12.79□□□□□ -0.36
SF1-220ENST00000626028 C6orf99Q4VX62 202 aa12.79□□□□□ -0.36
SF1-220ENST00000626028 FP248Q71RG6 208 aaPredicted RBP12.79□□□□□ -0.36
SF1-220ENST00000626028 SPRR1BP22528 89 aa12.78□□□□□ -0.36
SF1-220ENST00000626028 MUSTN1Q8IVN3 82 aa12.78□□□□□ -0.36
SF1-220ENST00000626028 IGLV7-46A0A075B6I9 117 aa12.77□□□□□ -0.37
SF1-220ENST00000626028 TRAV13-2A0A0B4J235 113 aa12.76□□□□□ -0.37
SF1-220ENST00000626028 ST20-AS1Q8NBB2 130 aa12.75□□□□□ -0.37
SF1-220ENST00000626028 A0A1B0GWB2 263 aa12.74□□□□□ -0.37
SF1-220ENST00000626028 A6NDN8 102 aa12.74□□□□□ -0.37
SF1-220ENST00000626028 A4D1N5 150 aa12.73□□□□□ -0.37
SF1-220ENST00000626028 C9orf153Q5TBE3 101 aa12.71□□□□□ -0.37
SF1-220ENST00000626028 SCGB1D1O95968 90 aa12.69□□□□□ -0.38
SF1-220ENST00000626028 CDIP1Q9H305 208 aa12.69□□□□□ -0.38
SF1-220ENST00000626028 LAMTOR3Q9UHA4 124 aa12.68□□□□□ -0.38
SF1-220ENST00000626028 SLC25A20O43772 301 aa12.67□□□□□ -0.38
SF1-220ENST00000626028 TAL2Q16559 108 aa12.66□□□□□ -0.38
SF1-220ENST00000626028 Q8N377 158 aa12.66□□□□□ -0.38
SF1-220ENST00000626028 NHP2Q9NX24 153 aaKnown RBP12.66□□□□□ -0.38
SF1-220ENST00000626028 TEX49A0A1B0GTD5 131 aa12.65□□□□□ -0.38
SF1-220ENST00000626028 SMIM11BQ8TCY0 68 aa12.64□□□□□ -0.39
SF1-220ENST00000626028 DLEU1O43261 78 aa12.63□□□□□ -0.39
SF1-220ENST00000626028 COX8AP10176 69 aa12.63□□□□□ -0.39
SF1-220ENST00000626028 IGLV5-48A0A075B6I7 105 aa12.62□□□□□ -0.39
SF1-220ENST00000626028 VAMP3Q15836 100 aa12.61□□□□□ -0.39
SF1-220ENST00000626028 KRTAP13-3Q3SY46 172 aa12.58□□□□□ -0.4
SF1-220ENST00000626028 DEFB105AQ8NG35 78 aa12.58□□□□□ -0.4
SF1-220ENST00000626028 CD164Q04900 197 aa12.57□□□□□ -0.4
SF1-220ENST00000626028 HIST1H4GQ99525 98 aa12.57□□□□□ -0.4
SF1-220ENST00000626028 LIMD2Q9BT23 127 aa12.57□□□□□ -0.4
SF1-220ENST00000626028 PRO1933Q9H354 126 aa12.56□□□□□ -0.4
SF1-220ENST00000626028 A0A0U1RQV1 116 aa12.55□□□□□ -0.4
SF1-220ENST00000626028 LINC01547P58512 204 aaPredicted RBP12.55□□□□□ -0.4
SF1-220ENST00000626028 MUC2Q02817 5179 aa12.55□□□□□ -0.4
SF1-220ENST00000626028 Q1RN00 199 aa12.54□□□□□ -0.4
SF1-220ENST00000626028 SMIM29Q86T20 159 aa12.53□□□□□ -0.4
SF1-220ENST00000626028 HIGD1BQ9P298 99 aa12.52□□□□□ -0.41
SF1-220ENST00000626028 LINC00575Q6W349 94 aa12.51□□□□□ -0.41
SF1-220ENST00000626028 BVES-AS1Q5T3Y7 98 aa12.49□□□□□ -0.41
SF1-220ENST00000626028 VAMP8Q9BV40 100 aa12.49□□□□□ -0.41
SF1-220ENST00000626028 PAM16Q9Y3D7 125 aa12.49□□□□□ -0.41
SF1-220ENST00000626028 SPATA45Q537H7 98 aa12.48□□□□□ -0.41
SF1-220ENST00000626028 hADV29S1A0JD25 119 aa12.47□□□□□ -0.41
SF1-220ENST00000626028 H7C2G1 150 aa12.47□□□□□ -0.41
SF1-220ENST00000626028 Q5XG85 94 aa12.47□□□□□ -0.41
SF1-220ENST00000626028 C14orf144Q96I85 54 aa12.47□□□□□ -0.41
SF1-220ENST00000626028 HRCT1Q6UXD1 115 aa12.44□□□□□ -0.42
SF1-220ENST00000626028 PPDPFLQ8WWR9 84 aa12.43□□□□□ -0.42
SF1-220ENST00000626028 C12orf57Q99622 126 aa12.43□□□□□ -0.42
SF1-220ENST00000626028 ASB16-AS1Q495Z4 193 aa12.42□□□□□ -0.42
SF1-220ENST00000626028 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.42□□□□□ -0.42
SF1-220ENST00000626028 Q6ZQY7 126 aa12.42□□□□□ -0.42
SF1-220ENST00000626028 A0A0B4J2C4 111 aa12.41□□□□□ -0.42
SF1-220ENST00000626028 F8WEM9 126 aa12.41□□□□□ -0.42
SF1-220ENST00000626028 CFC1BP0CG36 223 aa12.41□□□□□ -0.42
SF1-220ENST00000626028 CFC1P0CG37 223 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms