RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 SLC25A20O43772 301 aa11.26□□□□□ -0.61
PTCHD3-202ENST00000622555 S100A7L2Q5SY68 101 aa11.26□□□□□ -0.61
PTCHD3-202ENST00000622555 RPL28P46779 137 aaKnown RBP11.25□□□□□ -0.61
PTCHD3-202ENST00000622555 TEN1Q86WV5 123 aa11.25□□□□□ -0.61
PTCHD3-202ENST00000622555 MRPL55Q7Z7F7 128 aaKnown RBP11.24□□□□□ -0.61
PTCHD3-202ENST00000622555 C7orf33Q8WU49 177 aa11.24□□□□□ -0.61
PTCHD3-202ENST00000622555 CLEC2BQ92478 149 aa11.24□□□□□ -0.61
PTCHD3-202ENST00000622555 Q6ZSA8 131 aa11.23□□□□□ -0.61
PTCHD3-202ENST00000622555 PLAC8Q9NZF1 115 aa11.23□□□□□ -0.61
PTCHD3-202ENST00000622555 TRBV10-3A0A0K0K1G6 114 aa11.22□□□□□ -0.61
PTCHD3-202ENST00000622555 ANKRD29Q8N6D5 301 aa11.22□□□□□ -0.61
PTCHD3-202ENST00000622555 TMEM126AQ9H061 195 aa11.22□□□□□ -0.61
PTCHD3-202ENST00000622555 J3QR89 54 aa11.21□□□□□ -0.61
PTCHD3-202ENST00000622555 PHF5AQ7RTV0 110 aaKnown RBP11.21□□□□□ -0.61
PTCHD3-202ENST00000622555 LINC00167Q96N53 147 aa11.21□□□□□ -0.61
PTCHD3-202ENST00000622555 IGLV6-57P01721 117 aa11.21□□□□□ -0.62
PTCHD3-202ENST00000622555 PPDPFLQ8WWR9 84 aa11.21□□□□□ -0.62
PTCHD3-202ENST00000622555 VPS25Q9BRG1 176 aa11.21□□□□□ -0.62
PTCHD3-202ENST00000622555 RPL37AP8A6NKH3 93 aa11.2□□□□□ -0.62
PTCHD3-202ENST00000622555 EPM2AB3EWF7 344 aa11.2□□□□□ -0.62
PTCHD3-202ENST00000622555 PKHD1P08F94 4074 aa11.19□□□□□ -0.62
PTCHD3-202ENST00000622555 H3BT86 120 aa11.19□□□□□ -0.62
PTCHD3-202ENST00000622555 CIRBP-AS1Q8TBR5 109 aa11.19□□□□□ -0.62
PTCHD3-202ENST00000622555 SCXQ7RTU7 201 aa11.18□□□□□ -0.62
PTCHD3-202ENST00000622555 HAMPP81172 84 aa11.18□□□□□ -0.62
PTCHD3-202ENST00000622555 SMIM11BQ8TCY0 68 aa11.18□□□□□ -0.62
PTCHD3-202ENST00000622555 IGLV1-50A0A075B6I6 118 aa11.17□□□□□ -0.62
PTCHD3-202ENST00000622555 TRACP01848 142 aa11.17□□□□□ -0.62
PTCHD3-202ENST00000622555 UBE2BP63146 152 aa11.17□□□□□ -0.62
PTCHD3-202ENST00000622555 TRAV23DV6A0A075B6W5 121 aa11.15□□□□□ -0.62
PTCHD3-202ENST00000622555 DNAH8Q96JB1 4490 aa11.14□□□□□ -0.63
PTCHD3-202ENST00000622555 FAM218AQ96MZ4 157 aa11.14□□□□□ -0.63
PTCHD3-202ENST00000622555 H0YGX0 51 aa11.13□□□□□ -0.63
PTCHD3-202ENST00000622555 KCNQ1DNQ9H478 68 aa11.13□□□□□ -0.63
PTCHD3-202ENST00000622555 DYNC1H1Q14204 4646 aaKnown RBP11.13□□□□□ -0.63
PTCHD3-202ENST00000622555 PRYO14603 147 aa11.12□□□□□ -0.63
PTCHD3-202ENST00000622555 KRTAP11-1Q8IUC1 163 aa11.12□□□□□ -0.63
PTCHD3-202ENST00000622555 LRP1BQ9NZR2 4599 aa11.11□□□□□ -0.63
PTCHD3-202ENST00000622555 ZNF73O43830 326 aaPredicted RBP11.11□□□□□ -0.63
PTCHD3-202ENST00000622555 C6orf99Q4VX62 202 aa11.09□□□□□ -0.63
PTCHD3-202ENST00000622555 REG3GQ6UW15 175 aa11.09□□□□□ -0.63
PTCHD3-202ENST00000622555 DIRC1Q969H9 104 aa11.09□□□□□ -0.63
PTCHD3-202ENST00000622555 XGP55808 180 aa11.08□□□□□ -0.64
PTCHD3-202ENST00000622555 TEX49A0A1B0GTD5 131 aa11.06□□□□□ -0.64
PTCHD3-202ENST00000622555 CDIP1Q9H305 208 aa11.06□□□□□ -0.64
PTCHD3-202ENST00000622555 SPRR1AP35321 89 aa11.05□□□□□ -0.64
PTCHD3-202ENST00000622555 ETDCA0A1B0GVM5 59 aa11.04□□□□□ -0.64
PTCHD3-202ENST00000622555 BAALC-AS2P0C853 105 aa11.04□□□□□ -0.64
PTCHD3-202ENST00000622555 PSORS1C2Q9UIG4 136 aa11.04□□□□□ -0.64
PTCHD3-202ENST00000622555 A0A1B0GX51 115 aa11.03□□□□□ -0.64
PTCHD3-202ENST00000622555 COX7BP24311 80 aa11.03□□□□□ -0.64
PTCHD3-202ENST00000622555 TRBV7-6A0A0J9YX20 115 aa11.02□□□□□ -0.65
PTCHD3-202ENST00000622555 KRTAP4-16G5E9R7 235 aaPredicted RBP11.02□□□□□ -0.65
PTCHD3-202ENST00000622555 FAM19A1Q7Z5A9 133 aa11.02□□□□□ -0.65
PTCHD3-202ENST00000622555 BCE1O60756 84 aa11.01□□□□□ -0.65
PTCHD3-202ENST00000622555 ELOF1P60002 83 aaKnown RBP11.01□□□□□ -0.65
PTCHD3-202ENST00000622555 C1orf137Q5JT78 98 aa11.01□□□□□ -0.65
PTCHD3-202ENST00000622555 SIGMAR1Q99720 223 aa11.01□□□□□ -0.65
PTCHD3-202ENST00000622555 B5MCH6 92 aa11□□□□□ -0.65
PTCHD3-202ENST00000622555 Q6ZRX8 168 aa10.99□□□□□ -0.65
PTCHD3-202ENST00000622555 CDK2AP2O75956 126 aa10.98□□□□□ -0.65
PTCHD3-202ENST00000622555 SMR3BP02814 79 aaPredicted RBP10.98□□□□□ -0.65
PTCHD3-202ENST00000622555 PRLHP81277 87 aa10.98□□□□□ -0.65
PTCHD3-202ENST00000622555 EPPK1P58107 5090 aaKnown RBP10.98□□□□□ -0.65
PTCHD3-202ENST00000622555 DNAL4O96015 105 aa10.98□□□□□ -0.65
PTCHD3-202ENST00000622555 UBE2AP49459 152 aa10.98□□□□□ -0.65
PTCHD3-202ENST00000622555 LINC00528Q8N1L1 170 aa10.98□□□□□ -0.65
PTCHD3-202ENST00000622555 APOBP04114 4563 aaKnown RBP10.97□□□□□ -0.65
PTCHD3-202ENST00000622555 LINC00575Q6W349 94 aa10.95□□□□□ -0.66
PTCHD3-202ENST00000622555 FAM240AA0A1B0GVK7 77 aa10.95□□□□□ -0.66
PTCHD3-202ENST00000622555 OBSCN-AS1Q96MR7 158 aa10.94□□□□□ -0.66
PTCHD3-202ENST00000622555 Q9BRP9 147 aa10.94□□□□□ -0.66
PTCHD3-202ENST00000622555 H0Y9J4 135 aa10.93□□□□□ -0.66
PTCHD3-202ENST00000622555 RPL37AP61513 92 aaKnown RBP10.92□□□□□ -0.66
PTCHD3-202ENST00000622555 DHRS4-AS1Q9P1J3 65 aa10.92□□□□□ -0.66
PTCHD3-202ENST00000622555 hADV29S1A0JD25 119 aa10.92□□□□□ -0.66
PTCHD3-202ENST00000622555 SNCGO76070 127 aa10.92□□□□□ -0.66
PTCHD3-202ENST00000622555 IGLV7-43P04211 117 aa10.92□□□□□ -0.66
PTCHD3-202ENST00000622555 KRTAP13-1Q8IUC0 172 aa10.92□□□□□ -0.66
PTCHD3-202ENST00000622555 HIGD2AQ9BW72 106 aa10.92□□□□□ -0.66
PTCHD3-202ENST00000622555 ORMDL1Q9P0S3 153 aa10.92□□□□□ -0.66
PTCHD3-202ENST00000622555 INAFM2P0DMQ5 153 aa10.91□□□□□ -0.66
PTCHD3-202ENST00000622555 SMCR5Q8TEV8 140 aa10.91□□□□□ -0.66
PTCHD3-202ENST00000622555 SCGB1A1P11684 91 aa10.9□□□□□ -0.66
PTCHD3-202ENST00000622555 ZNF861PO60384 105 aa10.89□□□□□ -0.67
PTCHD3-202ENST00000622555 MT-ATP8P03928 68 aa10.88□□□□□ -0.67
PTCHD3-202ENST00000622555 ACYP1P07311 99 aa10.88□□□□□ -0.67
PTCHD3-202ENST00000622555 ERC2-IT1O76042 136 aa10.87□□□□□ -0.67
PTCHD3-202ENST00000622555 TMEM256-PLSCR3K7ERE1 68 aa10.85□□□□□ -0.67
PTCHD3-202ENST00000622555 Q6ZQY7 126 aa10.85□□□□□ -0.67
PTCHD3-202ENST00000622555 FAM229AH3BQW9 127 aa10.84□□□□□ -0.67
PTCHD3-202ENST00000622555 RYR1P21817 5038 aa10.83□□□□□ -0.68
PTCHD3-202ENST00000622555 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.83□□□□□ -0.68
PTCHD3-202ENST00000622555 ST20-AS1Q8NBB2 130 aa10.82□□□□□ -0.68
PTCHD3-202ENST00000622555 PLA2G1BP04054 148 aaKnown RBP10.81□□□□□ -0.68
PTCHD3-202ENST00000622555 KIAA1109Q2LD37 5005 aa10.81□□□□□ -0.68
PTCHD3-202ENST00000622555 VPS13BQ7Z7G8 4022 aa10.81□□□□□ -0.68
PTCHD3-202ENST00000622555 H3BQ85 93 aa10.81□□□□□ -0.68
PTCHD3-202ENST00000622555 JMJD7-PLA2G4BH0Y9G9 81 aa10.8□□□□□ -0.68
PTCHD3-202ENST00000622555 KRTAP10-4P60372 401 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms