RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 NDUFC1O43677 76 aa7.26□□□□□ -1.25
CDH1-214ENST00000621016 HIGD2BQ4VC39 106 aa7.26□□□□□ -1.25
CDH1-214ENST00000621016 Q8NDZ9 215 aa7.25□□□□□ -1.25
CDH1-214ENST00000621016 C1orf64Q8NEQ6 169 aa7.25□□□□□ -1.25
CDH1-214ENST00000621016 MGAM2Q2M2H8 2515 aa7.25□□□□□ -1.25
CDH1-214ENST00000621016 M0R378 163 aa7.24□□□□□ -1.25
CDH1-214ENST00000621016 SPAG11BQ08648 103 aa7.24□□□□□ -1.25
CDH1-214ENST00000621016 KTN1-AS1Q86SY8 53 aa7.24□□□□□ -1.25
CDH1-214ENST00000621016 OXLD1Q5BKU9 147 aa7.24□□□□□ -1.25
CDH1-214ENST00000621016 CD164L2Q6UWJ8 174 aa7.24□□□□□ -1.25
CDH1-214ENST00000621016 Q6ZTC4 211 aa7.24□□□□□ -1.25
CDH1-214ENST00000621016 MDFIQ99750 246 aa7.24□□□□□ -1.25
CDH1-214ENST00000621016 Q8IZM0 81 aa7.24□□□□□ -1.25
CDH1-214ENST00000621016 FAM30AQ9NZY2 134 aa7.24□□□□□ -1.25
CDH1-214ENST00000621016 JMJD7-PLA2G4BH0Y9G9 81 aa7.23□□□□□ -1.25
CDH1-214ENST00000621016 CYSRT1A8MQ03 144 aa7.23□□□□□ -1.25
CDH1-214ENST00000621016 SYCNQ0VAF6 134 aa7.23□□□□□ -1.25
CDH1-214ENST00000621016 C9orf66Q5T8R8 295 aa7.22□□□□□ -1.25
CDH1-214ENST00000621016 A0A1B0GUV1 79 aa7.22□□□□□ -1.25
CDH1-214ENST00000621016 ATP5EP56381 51 aaPredicted RBP7.22□□□□□ -1.25
CDH1-214ENST00000621016 C8orf87E5RJ46 101 aa7.21□□□□□ -1.25
CDH1-214ENST00000621016 IGHV4-30-4P0DP06 118 aa7.21□□□□□ -1.25
CDH1-214ENST00000621016 KIAA0087Q14695 138 aa7.21□□□□□ -1.25
CDH1-214ENST00000621016 SPART-AS1P0CW21 52 aa7.21□□□□□ -1.26
CDH1-214ENST00000621016 Q8N814 137 aa7.2□□□□□ -1.26
CDH1-214ENST00000621016 LYRM9A8MSI8 78 aa7.2□□□□□ -1.26
CDH1-214ENST00000621016 LINC00588Q9Y4M8 146 aa7.2□□□□□ -1.26
CDH1-214ENST00000621016 TRBV10-3A0A0K0K1G6 114 aa7.19□□□□□ -1.26
CDH1-214ENST00000621016 hDV103S1A0JD37 113 aa7.19□□□□□ -1.26
CDH1-214ENST00000621016 ZNF73O43830 326 aaPredicted RBP7.19□□□□□ -1.26
CDH1-214ENST00000621016 C16orf90A8MZG2 172 aa7.19□□□□□ -1.26
CDH1-214ENST00000621016 WFDC10BQ8IUB3 73 aa7.18□□□□□ -1.26
CDH1-214ENST00000621016 KMT2BQ9UMN6 2715 aaPredicted RBP7.18□□□□□ -1.26
CDH1-214ENST00000621016 HCG22E2RYF7 251 aa7.18□□□□□ -1.26
CDH1-214ENST00000621016 Q6ZQT0 140 aa7.17□□□□□ -1.26
CDH1-214ENST00000621016 LINC00612Q8N6U2 182 aa7.17□□□□□ -1.26
CDH1-214ENST00000621016 Q8NAQ8 132 aa7.17□□□□□ -1.26
CDH1-214ENST00000621016 Q6ZQY7 126 aa7.17□□□□□ -1.26
CDH1-214ENST00000621016 PRAC1Q96KF2 57 aa7.16□□□□□ -1.26
CDH1-214ENST00000621016 PRR15LQ9BU68 103 aa7.16□□□□□ -1.26
CDH1-214ENST00000621016 A6NED7 52 aa7.15□□□□□ -1.26
CDH1-214ENST00000621016 UBE2BP63146 152 aa7.15□□□□□ -1.26
CDH1-214ENST00000621016 CAMK2N2Q96S95 79 aa7.15□□□□□ -1.26
CDH1-214ENST00000621016 IGKV2D-24A0A075B6R9 120 aa7.14□□□□□ -1.27
CDH1-214ENST00000621016 C3orf84H3BNL1 204 aa7.13□□□□□ -1.27
CDH1-214ENST00000621016 KPRPQ5T749 579 aaPredicted RBP7.13□□□□□ -1.27
CDH1-214ENST00000621016 LELP1Q5T871 98 aa7.13□□□□□ -1.27
CDH1-214ENST00000621016 Q1T7F1 81 aa7.13□□□□□ -1.27
CDH1-214ENST00000621016 C6orf48Q9UBA6 75 aa7.13□□□□□ -1.27
CDH1-214ENST00000621016 TENM2Q9NT68 2774 aa7.13□□□□□ -1.27
CDH1-214ENST00000621016 Q5VV11 94 aa7.12□□□□□ -1.27
CDH1-214ENST00000621016 DEFB105AQ8NG35 78 aa7.12□□□□□ -1.27
CDH1-214ENST00000621016 COX17Q14061 63 aa7.11□□□□□ -1.27
CDH1-214ENST00000621016 LINC00575Q6W349 94 aa7.11□□□□□ -1.27
CDH1-214ENST00000621016 LCA10Q71F78 164 aa7.1□□□□□ -1.27
CDH1-214ENST00000621016 SMIM29Q86T20 159 aa7.1□□□□□ -1.27
CDH1-214ENST00000621016 DEFB116Q30KQ4 102 aa7.09□□□□□ -1.27
CDH1-214ENST00000621016 BCE1O60756 84 aa7.09□□□□□ -1.27
CDH1-214ENST00000621016 STAB2Q8WWQ8 2551 aa7.09□□□□□ -1.27
CDH1-214ENST00000621016 CSMD3Q7Z407 3707 aa7.09□□□□□ -1.27
CDH1-214ENST00000621016 PSCAO43653 123 aa7.09□□□□□ -1.28
CDH1-214ENST00000621016 OCR1Q9BZK8 76 aa7.08□□□□□ -1.28
CDH1-214ENST00000621016 A0A0J9YWU9 116 aa7.08□□□□□ -1.28
CDH1-214ENST00000621016 PRR26Q8N8Z3 221 aa7.08□□□□□ -1.28
CDH1-214ENST00000621016 MUC7Q8TAX7 377 aa7.08□□□□□ -1.28
CDH1-214ENST00000621016 DIRC1Q969H9 104 aa7.07□□□□□ -1.28
CDH1-214ENST00000621016 UBE2AP49459 152 aa7.07□□□□□ -1.28
CDH1-214ENST00000621016 CXCL6P80162 114 aa7.07□□□□□ -1.28
CDH1-214ENST00000621016 KRTAP10-11P60412 298 aa7.07□□□□□ -1.28
CDH1-214ENST00000621016 RPL37AP8A6NKH3 93 aa7.06□□□□□ -1.28
CDH1-214ENST00000621016 ADM2Q7Z4H4 148 aa7.05□□□□□ -1.28
CDH1-214ENST00000621016 COX7BP24311 80 aa7.05□□□□□ -1.28
CDH1-214ENST00000621016 PRR34Q9NV39 138 aa7.05□□□□□ -1.28
CDH1-214ENST00000621016 DEFB131BA0A096LNP1 70 aa7.04□□□□□ -1.28
CDH1-214ENST00000621016 IGKV4-1P06312 121 aa7.04□□□□□ -1.28
CDH1-214ENST00000621016 ST20-AS1Q8NBB2 130 aa7.04□□□□□ -1.28
CDH1-214ENST00000621016 IGLV6-57P01721 117 aa7.04□□□□□ -1.28
CDH1-214ENST00000621016 ANK2Q01484 3957 aa7.03□□□□□ -1.28
CDH1-214ENST00000621016 NDUFS5O43920 106 aa7.03□□□□□ -1.28
CDH1-214ENST00000621016 SRRM2Q9UQ35 2752 aaKnown RBP7.03□□□□□ -1.28
CDH1-214ENST00000621016 SERTAD4-AS1Q5TG53 156 aa7.02□□□□□ -1.29
CDH1-214ENST00000621016 C7orf65Q6ZTY9 151 aa7.01□□□□□ -1.29
CDH1-214ENST00000621016 A6NN06 94 aa7.01□□□□□ -1.29
CDH1-214ENST00000621016 NKAPP1Q8N9T2 125 aa7.01□□□□□ -1.29
CDH1-214ENST00000621016 C15orf56Q8N910 161 aa7□□□□□ -1.29
CDH1-214ENST00000621016 LINC00167Q96N53 147 aa7□□□□□ -1.29
CDH1-214ENST00000621016 FAM168BA1KXE4 195 aa7□□□□□ -1.29
CDH1-214ENST00000621016 CASC10Q5T4H9 136 aa7□□□□□ -1.29
CDH1-214ENST00000621016 ATP11AUNQ6ZP68 121 aa6.99□□□□□ -1.29
CDH1-214ENST00000621016 VPREB1P12018 145 aa6.99□□□□□ -1.29
CDH1-214ENST00000621016 LOC110117498A0A087WWA1 95 aa6.99□□□□□ -1.29
CDH1-214ENST00000621016 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.98□□□□□ -1.29
CDH1-214ENST00000621016 ERC2-IT1O76042 136 aa6.97□□□□□ -1.29
CDH1-214ENST00000621016 EGFEM1PQ0D2K5 195 aa6.97□□□□□ -1.29
CDH1-214ENST00000621016 Q8N9P0 234 aaPredicted RBP6.97□□□□□ -1.29
CDH1-214ENST00000621016 MOBPQ13875 183 aa6.96□□□□□ -1.29
CDH1-214ENST00000621016 KRTAP24-1Q3LI83 254 aa6.96□□□□□ -1.29
CDH1-214ENST00000621016 LINC00313P59037 77 aa6.96□□□□□ -1.3
CDH1-214ENST00000621016 ELOF1P60002 83 aaKnown RBP6.95□□□□□ -1.3
CDH1-214ENST00000621016 COL7A1Q02388 2944 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms