RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 CRIPTQ9P021 101 aa5.47□□□□□ -1.53
ALMS1-208ENST00000620466 KRTAP1-1Q07627 177 aa5.46□□□□□ -1.53
ALMS1-208ENST00000620466 CEP295Q9C0D2 2601 aa5.46□□□□□ -1.54
ALMS1-208ENST00000620466 KLKP1Q107X0 134 aa5.46□□□□□ -1.54
ALMS1-208ENST00000620466 LUZP6Q538Z0 58 aa5.46□□□□□ -1.54
ALMS1-208ENST00000620466 APLNQ9ULZ1 77 aa5.46□□□□□ -1.54
ALMS1-208ENST00000620466 K7EIL1 84 aa5.45□□□□□ -1.54
ALMS1-208ENST00000620466 SSBP3-AS1Q7Z2R9 100 aa5.45□□□□□ -1.54
ALMS1-208ENST00000620466 KTN1-AS1Q86SY8 53 aa5.45□□□□□ -1.54
ALMS1-208ENST00000620466 SONP18583 2426 aaKnown RBP5.45□□□□□ -1.54
ALMS1-208ENST00000620466 IGFL1Q6UW32 110 aa5.45□□□□□ -1.54
ALMS1-208ENST00000620466 H7BZZ5 65 aa5.45□□□□□ -1.54
ALMS1-208ENST00000620466 PLA2G2DQ9UNK4 145 aa5.43□□□□□ -1.54
ALMS1-208ENST00000620466 LINC00336Q6ZUF6 198 aa5.43□□□□□ -1.54
ALMS1-208ENST00000620466 COA5Q86WW8 74 aa5.43□□□□□ -1.54
ALMS1-208ENST00000620466 CACNA1AO00555 2505 aa5.43□□□□□ -1.54
ALMS1-208ENST00000620466 CCDC168Q8NDH2 2452 aa5.43□□□□□ -1.54
ALMS1-208ENST00000620466 A0A0G2JQZ4 141 aa5.43□□□□□ -1.54
ALMS1-208ENST00000620466 A0A1W2PNN7 141 aa5.43□□□□□ -1.54
ALMS1-208ENST00000620466 TLX1NBP0CAT3 122 aa5.43□□□□□ -1.54
ALMS1-208ENST00000620466 H3BS24 57 aa5.43□□□□□ -1.54
ALMS1-208ENST00000620466 SMR3BP02814 79 aaPredicted RBP5.43□□□□□ -1.54
ALMS1-208ENST00000620466 XIRP2A4UGR9 3374 aa5.42□□□□□ -1.54
ALMS1-208ENST00000620466 LAMA2P24043 3122 aaKnown RBP5.41□□□□□ -1.54
ALMS1-208ENST00000620466 CASC10Q5T4H9 136 aa5.41□□□□□ -1.54
ALMS1-208ENST00000620466 ANKRD17O75179 2603 aaKnown RBP5.41□□□□□ -1.54
ALMS1-208ENST00000620466 C8orf17Q9NRJ1 99 aa5.4□□□□□ -1.54
ALMS1-208ENST00000620466 A0A087WTM6 91 aa5.4□□□□□ -1.55
ALMS1-208ENST00000620466 ZNF861PO60384 105 aa5.4□□□□□ -1.55
ALMS1-208ENST00000620466 PRRC2CQ9Y520 2896 aaKnown RBP5.39□□□□□ -1.55
ALMS1-208ENST00000620466 A0A1B0GVX0 72 aa5.39□□□□□ -1.55
ALMS1-208ENST00000620466 SZT2Q5T011 3432 aa5.39□□□□□ -1.55
ALMS1-208ENST00000620466 A0A1W2PNM2 257 aa5.38□□□□□ -1.55
ALMS1-208ENST00000620466 RBM12B-AS1Q9P1G2 102 aa5.38□□□□□ -1.55
ALMS1-208ENST00000620466 IGLV5-37A0A075B6J1 123 aa5.38□□□□□ -1.55
ALMS1-208ENST00000620466 Q8NDZ9 215 aa5.37□□□□□ -1.55
ALMS1-208ENST00000620466 ANAPC11Q9NYG5 84 aa5.37□□□□□ -1.55
ALMS1-208ENST00000620466 PRR15Q8IV56 129 aa5.37□□□□□ -1.55
ALMS1-208ENST00000620466 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
ALMS1-208ENST00000620466 IGLV7-43P04211 117 aa5.36□□□□□ -1.55
ALMS1-208ENST00000620466 A8MUN3 132 aa5.36□□□□□ -1.55
ALMS1-208ENST00000620466 ZNF462Q96JM2 2506 aa5.36□□□□□ -1.55
ALMS1-208ENST00000620466 ABCA2Q9BZC7 2435 aa5.35□□□□□ -1.55
ALMS1-208ENST00000620466 SPTBN5Q9NRC6 3674 aaKnown RBP5.35□□□□□ -1.55
ALMS1-208ENST00000620466 MYO9AB2RTY4 2548 aa5.35□□□□□ -1.55
ALMS1-208ENST00000620466 MIR22HGQ0VDD5 57 aa5.35□□□□□ -1.55
ALMS1-208ENST00000620466 IGLV5-48A0A075B6I7 105 aa5.35□□□□□ -1.55
ALMS1-208ENST00000620466 DOPEY1Q5JWR5 2465 aa5.35□□□□□ -1.55
ALMS1-208ENST00000620466 USP9XQ93008 2570 aaPredicted RBP5.34□□□□□ -1.55
ALMS1-208ENST00000620466 UQCR11O14957 56 aa5.34□□□□□ -1.55
ALMS1-208ENST00000620466 NOTCH2Q04721 2471 aa5.34□□□□□ -1.55
ALMS1-208ENST00000620466 CD164Q04900 197 aa5.34□□□□□ -1.56
ALMS1-208ENST00000620466 CYSTM1Q9H1C7 97 aa5.33□□□□□ -1.56
ALMS1-208ENST00000620466 CR1P17927 2039 aa5.33□□□□□ -1.56
ALMS1-208ENST00000620466 FN1P02751 2386 aaKnown RBP5.33□□□□□ -1.56
ALMS1-208ENST00000620466 TRIOO75962 3097 aa5.33□□□□□ -1.56
ALMS1-208ENST00000620466 PRUNE2Q8WUY3 3088 aa5.33□□□□□ -1.56
ALMS1-208ENST00000620466 CFAP54Q96N23 3096 aa5.33□□□□□ -1.56
ALMS1-208ENST00000620466 CHD8Q9HCK8 2581 aa5.32□□□□□ -1.56
ALMS1-208ENST00000620466 OCR1Q9BZK8 76 aa5.32□□□□□ -1.56
ALMS1-208ENST00000620466 PSORS1C2Q9UIG4 136 aa5.32□□□□□ -1.56
ALMS1-208ENST00000620466 ABCA12Q86UK0 2595 aa5.32□□□□□ -1.56
ALMS1-208ENST00000620466 LINC00483Q53H64 154 aa5.32□□□□□ -1.56
ALMS1-208ENST00000620466 POLQO75417 2590 aa5.31□□□□□ -1.56
ALMS1-208ENST00000620466 CNBPP62633 177 aaKnown RBP5.31□□□□□ -1.56
ALMS1-208ENST00000620466 CYP4F30PQ9H0H9 118 aa5.31□□□□□ -1.56
ALMS1-208ENST00000620466 VCANP13611 3396 aa5.31□□□□□ -1.56
ALMS1-208ENST00000620466 A0A0D9SG42 100 aa5.3□□□□□ -1.56
ALMS1-208ENST00000620466 PIEZO1Q92508 2521 aa5.3□□□□□ -1.56
ALMS1-208ENST00000620466 CAMK2N1Q7Z7J9 78 aa5.3□□□□□ -1.56
ALMS1-208ENST00000620466 SPRR4Q96PI1 79 aa5.3□□□□□ -1.56
ALMS1-208ENST00000620466 C9orf163Q8N9P6 203 aa5.3□□□□□ -1.56
ALMS1-208ENST00000620466 USP9YO00507 2555 aaPredicted RBP5.29□□□□□ -1.56
ALMS1-208ENST00000620466 LCA10Q71F78 164 aa5.29□□□□□ -1.56
ALMS1-208ENST00000620466 LAMA1P25391 3075 aa5.29□□□□□ -1.56
ALMS1-208ENST00000620466 LRRK2Q5S007 2527 aa5.29□□□□□ -1.56
ALMS1-208ENST00000620466 MYO18BQ8IUG5 2567 aa5.29□□□□□ -1.56
ALMS1-208ENST00000620466 SPTBN4Q9H254 2564 aa5.29□□□□□ -1.56
ALMS1-208ENST00000620466 PKD1L2Q7Z442 2459 aa5.28□□□□□ -1.56
ALMS1-208ENST00000620466 Q8N1X5 172 aa5.28□□□□□ -1.56
ALMS1-208ENST00000620466 TLN2Q9Y4G6 2542 aa5.28□□□□□ -1.56
ALMS1-208ENST00000620466 Q5XG85 94 aa5.26□□□□□ -1.57
ALMS1-208ENST00000620466 CELSR3Q9NYQ7 3312 aa5.26□□□□□ -1.57
ALMS1-208ENST00000620466 WIPF1O43516 503 aa5.25□□□□□ -1.57
ALMS1-208ENST00000620466 CDC42SE1Q9NRR8 79 aa5.25□□□□□ -1.57
ALMS1-208ENST00000620466 SPANXA2-OT1Q8N9U9 137 aa5.25□□□□□ -1.57
ALMS1-208ENST00000620466 Q6ZSA8 131 aa5.24□□□□□ -1.57
ALMS1-208ENST00000620466 FAM229BQ4G0N7 80 aa5.24□□□□□ -1.57
ALMS1-208ENST00000620466 MGAQ8IWI9 3026 aa5.22□□□□□ -1.57
ALMS1-208ENST00000620466 Q1T7F1 81 aa5.22□□□□□ -1.57
ALMS1-208ENST00000620466 PRR26Q8N8Z3 221 aa5.22□□□□□ -1.57
ALMS1-208ENST00000620466 KRTAP26-1Q6PEX3 210 aa5.21□□□□□ -1.57
ALMS1-208ENST00000620466 SPRR1AP35321 89 aa5.21□□□□□ -1.58
ALMS1-208ENST00000620466 USP34Q70CQ2 3546 aa5.21□□□□□ -1.58
ALMS1-208ENST00000620466 M0R2T5 61 aa5.21□□□□□ -1.58
ALMS1-208ENST00000620466 TNP2Q05952 138 aa5.21□□□□□ -1.58
ALMS1-208ENST00000620466 AKAP13Q12802 2813 aa5.21□□□□□ -1.58
ALMS1-208ENST00000620466 SETD2Q9BYW2 2564 aaPredicted RBP5.21□□□□□ -1.58
ALMS1-208ENST00000620466 IGLV7-46A0A075B6I9 117 aa5.19□□□□□ -1.58
ALMS1-208ENST00000620466 REV3LO60673 3130 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms