RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 KRTAP1-1Q07627 177 aa6.59□□□□□ -1.35
TNFAIP3-210ENST00000620204 IGKV4-1P06312 121 aa6.59□□□□□ -1.35
TNFAIP3-210ENST00000620204 A8MUN3 132 aa6.59□□□□□ -1.36
TNFAIP3-210ENST00000620204 A0A1B0GUV1 79 aa6.58□□□□□ -1.36
TNFAIP3-210ENST00000620204 COL6A5A8TX70 2615 aa6.58□□□□□ -1.36
TNFAIP3-210ENST00000620204 CHKB-CPT1BH3BT56 60 aa6.57□□□□□ -1.36
TNFAIP3-210ENST00000620204 OCR1Q9BZK8 76 aa6.57□□□□□ -1.36
TNFAIP3-210ENST00000620204 C9orf66Q5T8R8 295 aa6.57□□□□□ -1.36
TNFAIP3-210ENST00000620204 Q6ZTC4 211 aa6.57□□□□□ -1.36
TNFAIP3-210ENST00000620204 MRPL55Q7Z7F7 128 aaKnown RBP6.57□□□□□ -1.36
TNFAIP3-210ENST00000620204 WFDC13Q8IUB5 93 aa6.57□□□□□ -1.36
TNFAIP3-210ENST00000620204 IGLV6-57P01721 117 aa6.56□□□□□ -1.36
TNFAIP3-210ENST00000620204 DEFB135Q30KP9 77 aa6.56□□□□□ -1.36
TNFAIP3-210ENST00000620204 TRAV22A0A0B4J277 110 aa6.55□□□□□ -1.36
TNFAIP3-210ENST00000620204 H3BQ85 93 aa6.55□□□□□ -1.36
TNFAIP3-210ENST00000620204 Q6ZRP5 223 aa6.55□□□□□ -1.36
TNFAIP3-210ENST00000620204 NKAPP1Q8N9T2 125 aa6.55□□□□□ -1.36
TNFAIP3-210ENST00000620204 hDV103S1A0JD37 113 aa6.54□□□□□ -1.36
TNFAIP3-210ENST00000620204 WFDC10BQ8IUB3 73 aa6.54□□□□□ -1.36
TNFAIP3-210ENST00000620204 C6orf48Q9UBA6 75 aa6.54□□□□□ -1.36
TNFAIP3-210ENST00000620204 A8MU10 97 aa6.54□□□□□ -1.36
TNFAIP3-210ENST00000620204 CMC4P56277 68 aaPredicted RBP6.53□□□□□ -1.36
TNFAIP3-210ENST00000620204 NOTCH1P46531 2555 aa6.53□□□□□ -1.36
TNFAIP3-210ENST00000620204 RPL37AP8A6NKH3 93 aa6.53□□□□□ -1.36
TNFAIP3-210ENST00000620204 ERC2-IT1O76042 136 aa6.53□□□□□ -1.36
TNFAIP3-210ENST00000620204 A0A0J9YWU9 116 aa6.52□□□□□ -1.37
TNFAIP3-210ENST00000620204 ELOF1P60002 83 aaKnown RBP6.52□□□□□ -1.37
TNFAIP3-210ENST00000620204 LINC00208Q96KT6 92 aa6.52□□□□□ -1.37
TNFAIP3-210ENST00000620204 TENM1Q9UKZ4 2725 aa6.52□□□□□ -1.37
TNFAIP3-210ENST00000620204 LINC00612Q8N6U2 182 aa6.51□□□□□ -1.37
TNFAIP3-210ENST00000620204 ETDCA0A1B0GVM5 59 aa6.51□□□□□ -1.37
TNFAIP3-210ENST00000620204 KPRPQ5T749 579 aaPredicted RBP6.51□□□□□ -1.37
TNFAIP3-210ENST00000620204 PRR15LQ9BU68 103 aa6.51□□□□□ -1.37
TNFAIP3-210ENST00000620204 M0R378 163 aa6.5□□□□□ -1.37
TNFAIP3-210ENST00000620204 MP68P56378 58 aa6.5□□□□□ -1.37
TNFAIP3-210ENST00000620204 ST20-AS1Q8NBB2 130 aa6.5□□□□□ -1.37
TNFAIP3-210ENST00000620204 A0A0G2JQZ4 141 aa6.5□□□□□ -1.37
TNFAIP3-210ENST00000620204 A0A1W2PNN7 141 aa6.5□□□□□ -1.37
TNFAIP3-210ENST00000620204 PRR15Q8IV56 129 aa6.5□□□□□ -1.37
TNFAIP3-210ENST00000620204 A6NED7 52 aa6.5□□□□□ -1.37
TNFAIP3-210ENST00000620204 C1orf137Q5JT78 98 aa6.5□□□□□ -1.37
TNFAIP3-210ENST00000620204 CSNK1G2-AS1Q8NCQ2 148 aa6.5□□□□□ -1.37
TNFAIP3-210ENST00000620204 MGAM2Q2M2H8 2515 aa6.49□□□□□ -1.37
TNFAIP3-210ENST00000620204 UBE2BP63146 152 aa6.49□□□□□ -1.37
TNFAIP3-210ENST00000620204 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.48□□□□□ -1.37
TNFAIP3-210ENST00000620204 IGKV2D-24A0A075B6R9 120 aa6.48□□□□□ -1.37
TNFAIP3-210ENST00000620204 K7EQZ3 153 aa6.48□□□□□ -1.37
TNFAIP3-210ENST00000620204 VWFP04275 2813 aa6.48□□□□□ -1.37
TNFAIP3-210ENST00000620204 Q6ZRU5 148 aa6.48□□□□□ -1.37
TNFAIP3-210ENST00000620204 IGHV4-30-4P0DP06 118 aa6.48□□□□□ -1.37
TNFAIP3-210ENST00000620204 LINC00528Q8N1L1 170 aa6.46□□□□□ -1.37
TNFAIP3-210ENST00000620204 IGLV1-51P01701 117 aa6.46□□□□□ -1.38
TNFAIP3-210ENST00000620204 VPREB1P12018 145 aa6.46□□□□□ -1.38
TNFAIP3-210ENST00000620204 NBEAL1Q6ZS30 2694 aa6.46□□□□□ -1.38
TNFAIP3-210ENST00000620204 KRTAP10-3P60369 221 aa6.46□□□□□ -1.38
TNFAIP3-210ENST00000620204 SYCNQ0VAF6 134 aa6.45□□□□□ -1.38
TNFAIP3-210ENST00000620204 Q1T7F1 81 aa6.45□□□□□ -1.38
TNFAIP3-210ENST00000620204 Q8N377 158 aa6.44□□□□□ -1.38
TNFAIP3-210ENST00000620204 B9D2Q9BPU9 175 aa6.44□□□□□ -1.38
TNFAIP3-210ENST00000620204 PSCAO43653 123 aa6.44□□□□□ -1.38
TNFAIP3-210ENST00000620204 CD164Q04900 197 aa6.44□□□□□ -1.38
TNFAIP3-210ENST00000620204 C19orf73Q9NVV2 129 aa6.44□□□□□ -1.38
TNFAIP3-210ENST00000620204 A0A1W2PNM2 257 aa6.43□□□□□ -1.38
TNFAIP3-210ENST00000620204 HCG22E2RYF7 251 aa6.43□□□□□ -1.38
TNFAIP3-210ENST00000620204 X6R8D5 127 aa6.43□□□□□ -1.38
TNFAIP3-210ENST00000620204 A0A096LNI7 61 aa6.42□□□□□ -1.38
TNFAIP3-210ENST00000620204 UBE2AP49459 152 aa6.42□□□□□ -1.38
TNFAIP3-210ENST00000620204 LELP1Q5T871 98 aa6.42□□□□□ -1.38
TNFAIP3-210ENST00000620204 RPL37AP61513 92 aaKnown RBP6.42□□□□□ -1.38
TNFAIP3-210ENST00000620204 OXLD1Q5BKU9 147 aa6.42□□□□□ -1.38
TNFAIP3-210ENST00000620204 NDUFB1O75438 58 aa6.41□□□□□ -1.38
TNFAIP3-210ENST00000620204 EGFEM1PQ0D2K5 195 aa6.41□□□□□ -1.38
TNFAIP3-210ENST00000620204 LYRM9A8MSI8 78 aa6.4□□□□□ -1.38
TNFAIP3-210ENST00000620204 C7orf33Q8WU49 177 aa6.4□□□□□ -1.38
TNFAIP3-210ENST00000620204 AKAP9Q99996 3911 aa6.4□□□□□ -1.38
TNFAIP3-210ENST00000620204 SPART-AS1P0CW21 52 aa6.4□□□□□ -1.38
TNFAIP3-210ENST00000620204 A0A087WSZ3 146 aa6.4□□□□□ -1.39
TNFAIP3-210ENST00000620204 DSCR10P59022 87 aa6.39□□□□□ -1.39
TNFAIP3-210ENST00000620204 Q8NBF4 154 aa6.39□□□□□ -1.39
TNFAIP3-210ENST00000620204 ANK3Q12955 4377 aaKnown RBP6.39□□□□□ -1.39
TNFAIP3-210ENST00000620204 PCOTHQ58A44 107 aa6.39□□□□□ -1.39
TNFAIP3-210ENST00000620204 RBM12B-AS1Q9P1G2 102 aa6.39□□□□□ -1.39
TNFAIP3-210ENST00000620204 KRTAP24-1Q3LI83 254 aa6.38□□□□□ -1.39
TNFAIP3-210ENST00000620204 SERTAD4-AS1Q5TG53 156 aa6.38□□□□□ -1.39
TNFAIP3-210ENST00000620204 H0Y9P7 68 aa6.38□□□□□ -1.39
TNFAIP3-210ENST00000620204 Q5VV11 94 aa6.38□□□□□ -1.39
TNFAIP3-210ENST00000620204 C16orf90A8MZG2 172 aa6.37□□□□□ -1.39
TNFAIP3-210ENST00000620204 FAM168BA1KXE4 195 aa6.37□□□□□ -1.39
TNFAIP3-210ENST00000620204 FBN1P35555 2871 aaKnown RBP6.36□□□□□ -1.39
TNFAIP3-210ENST00000620204 GVQW2A0A096LPI5 108 aaPredicted RBP6.36□□□□□ -1.39
TNFAIP3-210ENST00000620204 H0Y9J4 135 aa6.36□□□□□ -1.39
TNFAIP3-210ENST00000620204 SPAG11AQ6PDA7 123 aa6.36□□□□□ -1.39
TNFAIP3-210ENST00000620204 KTN1-AS1Q86SY8 53 aa6.36□□□□□ -1.39
TNFAIP3-210ENST00000620204 DHRS4-AS1Q9P1J3 65 aa6.36□□□□□ -1.39
TNFAIP3-210ENST00000620204 LIMD2Q9BT23 127 aa6.35□□□□□ -1.39
TNFAIP3-210ENST00000620204 APOC4P55056 127 aa6.34□□□□□ -1.39
TNFAIP3-210ENST00000620204 TRRAPQ9Y4A5 3859 aa6.34□□□□□ -1.39
TNFAIP3-210ENST00000620204 IGLV5-48A0A075B6I7 105 aa6.34□□□□□ -1.4
TNFAIP3-210ENST00000620204 PRR34Q9NV39 138 aa6.34□□□□□ -1.4
TNFAIP3-210ENST00000620204 NDUFS5O43920 106 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms