RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 FAM19A5Q7Z5A7 132 aaPredicted RBP12.56□□□□□ -0.4
PCDHGB3-202ENST00000618934 TMEM258P61165 79 aa12.54□□□□□ -0.4
PCDHGB3-202ENST00000618934 H3BQ85 93 aa12.54□□□□□ -0.4
PCDHGB3-202ENST00000618934 DPH3Q96FX2 82 aa12.54□□□□□ -0.4
PCDHGB3-202ENST00000618934 LINC00588Q9Y4M8 146 aa12.54□□□□□ -0.4
PCDHGB3-202ENST00000618934 RPS28P62857 69 aaKnown RBP12.53□□□□□ -0.4
PCDHGB3-202ENST00000618934 C7orf33Q8WU49 177 aa12.53□□□□□ -0.4
PCDHGB3-202ENST00000618934 LYSTQ99698 3801 aa12.53□□□□□ -0.4
PCDHGB3-202ENST00000618934 PDE6GP18545 87 aa12.53□□□□□ -0.4
PCDHGB3-202ENST00000618934 SCXQ7RTU7 201 aa12.53□□□□□ -0.4
PCDHGB3-202ENST00000618934 FAM168BA1KXE4 195 aa12.52□□□□□ -0.4
PCDHGB3-202ENST00000618934 BAHCC1Q9P281 2608 aa12.52□□□□□ -0.4
PCDHGB3-202ENST00000618934 NKAPP1Q8N9T2 125 aa12.5□□□□□ -0.41
PCDHGB3-202ENST00000618934 KCNQ1DNQ9H478 68 aa12.5□□□□□ -0.41
PCDHGB3-202ENST00000618934 RPL37AP8A6NKH3 93 aa12.49□□□□□ -0.41
PCDHGB3-202ENST00000618934 OXTP01178 125 aa12.49□□□□□ -0.41
PCDHGB3-202ENST00000618934 DNAH10Q8IVF4 4471 aa12.49□□□□□ -0.41
PCDHGB3-202ENST00000618934 TRAV10A0A0B4J240 114 aa12.49□□□□□ -0.41
PCDHGB3-202ENST00000618934 DEFB105AQ8NG35 78 aa12.48□□□□□ -0.41
PCDHGB3-202ENST00000618934 MRAPQ8TCY5 172 aa12.48□□□□□ -0.41
PCDHGB3-202ENST00000618934 KRTAP7-1Q8IUC3 87 aa12.48□□□□□ -0.41
PCDHGB3-202ENST00000618934 F8WDY8 70 aa12.47□□□□□ -0.41
PCDHGB3-202ENST00000618934 C20orf197Q8N268 126 aa12.45□□□□□ -0.42
PCDHGB3-202ENST00000618934 Q8N377 158 aa12.45□□□□□ -0.42
PCDHGB3-202ENST00000618934 CXCL6P80162 114 aa12.44□□□□□ -0.42
PCDHGB3-202ENST00000618934 TLX1NBP0CAT3 122 aa12.43□□□□□ -0.42
PCDHGB3-202ENST00000618934 Q9BRP9 147 aa12.42□□□□□ -0.42
PCDHGB3-202ENST00000618934 COL7A1Q02388 2944 aa12.42□□□□□ -0.42
PCDHGB3-202ENST00000618934 KRTAP4-16G5E9R7 235 aaPredicted RBP12.41□□□□□ -0.42
PCDHGB3-202ENST00000618934 K7EIL1 84 aa12.4□□□□□ -0.42
PCDHGB3-202ENST00000618934 Q8N9L7 120 aa12.4□□□□□ -0.42
PCDHGB3-202ENST00000618934 TM2D3Q9BRN9 247 aa12.4□□□□□ -0.42
PCDHGB3-202ENST00000618934 IGLV1-50A0A075B6I6 118 aa12.39□□□□□ -0.43
PCDHGB3-202ENST00000618934 MGAM2Q2M2H8 2515 aa12.39□□□□□ -0.43
PCDHGB3-202ENST00000618934 C3orf84H3BNL1 204 aa12.38□□□□□ -0.43
PCDHGB3-202ENST00000618934 ST20-AS1Q8NBB2 130 aa12.38□□□□□ -0.43
PCDHGB3-202ENST00000618934 PLA2G2DQ9UNK4 145 aa12.38□□□□□ -0.43
PCDHGB3-202ENST00000618934 DNAH9Q9NYC9 4486 aa12.38□□□□□ -0.43
PCDHGB3-202ENST00000618934 Q6ZRX8 168 aa12.37□□□□□ -0.43
PCDHGB3-202ENST00000618934 TRAV7A0A075B6U4 112 aa12.37□□□□□ -0.43
PCDHGB3-202ENST00000618934 STAB2Q8WWQ8 2551 aa12.36□□□□□ -0.43
PCDHGB3-202ENST00000618934 IGLV5-37A0A075B6J1 123 aa12.35□□□□□ -0.43
PCDHGB3-202ENST00000618934 ERC2-IT1O76042 136 aa12.35□□□□□ -0.43
PCDHGB3-202ENST00000618934 SPRR1AP35321 89 aa12.34□□□□□ -0.43
PCDHGB3-202ENST00000618934 BCE1O60756 84 aa12.33□□□□□ -0.44
PCDHGB3-202ENST00000618934 IGLV5-48A0A075B6I7 105 aa12.32□□□□□ -0.44
PCDHGB3-202ENST00000618934 H7BZZ5 65 aa12.32□□□□□ -0.44
PCDHGB3-202ENST00000618934 ETDCA0A1B0GVM5 59 aa12.32□□□□□ -0.44
PCDHGB3-202ENST00000618934 PRYO14603 147 aa12.32□□□□□ -0.44
PCDHGB3-202ENST00000618934 NREPQ16612 68 aa12.31□□□□□ -0.44
PCDHGB3-202ENST00000618934 DHRS4-AS1Q9P1J3 65 aa12.31□□□□□ -0.44
PCDHGB3-202ENST00000618934 TENM2Q9NT68 2774 aa12.31□□□□□ -0.44
PCDHGB3-202ENST00000618934 BPY2O14599 106 aa12.31□□□□□ -0.44
PCDHGB3-202ENST00000618934 C5orf47Q569G3 176 aa12.31□□□□□ -0.44
PCDHGB3-202ENST00000618934 MRPL55Q7Z7F7 128 aaKnown RBP12.31□□□□□ -0.44
PCDHGB3-202ENST00000618934 KRTAP1-5Q9BYS1 174 aa12.31□□□□□ -0.44
PCDHGB3-202ENST00000618934 CSMD3Q7Z407 3707 aa12.31□□□□□ -0.44
PCDHGB3-202ENST00000618934 DNAH7Q8WXX0 4024 aa12.3□□□□□ -0.44
PCDHGB3-202ENST00000618934 SNURFQ9Y675 71 aa12.3□□□□□ -0.44
PCDHGB3-202ENST00000618934 IGKV4-1P06312 121 aa12.3□□□□□ -0.44
PCDHGB3-202ENST00000618934 C4orf26Q17RF5 130 aa12.3□□□□□ -0.44
PCDHGB3-202ENST00000618934 Q5XG85 94 aa12.3□□□□□ -0.44
PCDHGB3-202ENST00000618934 A0A1W2PNM2 257 aa12.29□□□□□ -0.44
PCDHGB3-202ENST00000618934 FAM236DA0A1B0GTK5 79 aa12.29□□□□□ -0.44
PCDHGB3-202ENST00000618934 FAM236CP0DP71 79 aa12.29□□□□□ -0.44
PCDHGB3-202ENST00000618934 RMI2Q96E14 147 aa12.28□□□□□ -0.44
PCDHGB3-202ENST00000618934 TNP2Q05952 138 aa12.27□□□□□ -0.44
PCDHGB3-202ENST00000618934 KLKP1Q107X0 134 aa12.27□□□□□ -0.45
PCDHGB3-202ENST00000618934 SRRM2Q9UQ35 2752 aaKnown RBP12.25□□□□□ -0.45
PCDHGB3-202ENST00000618934 UBE2BP63146 152 aa12.24□□□□□ -0.45
PCDHGB3-202ENST00000618934 C1orf137Q5JT78 98 aa12.24□□□□□ -0.45
PCDHGB3-202ENST00000618934 A0A096LNI7 61 aa12.22□□□□□ -0.45
PCDHGB3-202ENST00000618934 A0A0G2JQZ4 141 aa12.22□□□□□ -0.45
PCDHGB3-202ENST00000618934 A0A1W2PNN7 141 aa12.22□□□□□ -0.45
PCDHGB3-202ENST00000618934 IGKV2-24A0A0C4DH68 120 aa12.22□□□□□ -0.45
PCDHGB3-202ENST00000618934 HRCT1Q6UXD1 115 aa12.21□□□□□ -0.45
PCDHGB3-202ENST00000618934 REG3GQ6UW15 175 aa12.21□□□□□ -0.46
PCDHGB3-202ENST00000618934 F8WEM9 126 aa12.2□□□□□ -0.46
PCDHGB3-202ENST00000618934 EPM2AB3EWF7 344 aa12.19□□□□□ -0.46
PCDHGB3-202ENST00000618934 FUSP35637 526 aaKnown RBP eCLIP12.19□□□□□ -0.46
PCDHGB3-202ENST00000618934 SMIM29Q86T20 159 aa12.19□□□□□ -0.46
PCDHGB3-202ENST00000618934 SERP1Q9Y6X1 66 aa12.18□□□□□ -0.46
PCDHGB3-202ENST00000618934 DYNC2H1Q8NCM8 4307 aaKnown RBP12.18□□□□□ -0.46
PCDHGB3-202ENST00000618934 Q8NBF4 154 aa12.17□□□□□ -0.46
PCDHGB3-202ENST00000618934 PRLHP81277 87 aa12.16□□□□□ -0.46
PCDHGB3-202ENST00000618934 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.15□□□□□ -0.46
PCDHGB3-202ENST00000618934 PLECQ15149 4684 aaKnown RBP12.15□□□□□ -0.46
PCDHGB3-202ENST00000618934 OCR1Q9BZK8 76 aa12.15□□□□□ -0.47
PCDHGB3-202ENST00000618934 KRTAP11-1Q8IUC1 163 aa12.13□□□□□ -0.47
PCDHGB3-202ENST00000618934 SPRR4Q96PI1 79 aa12.13□□□□□ -0.47
PCDHGB3-202ENST00000618934 C16orf90A8MZG2 172 aa12.13□□□□□ -0.47
PCDHGB3-202ENST00000618934 PSCAO43653 123 aa12.12□□□□□ -0.47
PCDHGB3-202ENST00000618934 CHTF8P0CG12 524 aa12.12□□□□□ -0.47
PCDHGB3-202ENST00000618934 LINC00476Q8WZB0 136 aa12.12□□□□□ -0.47
PCDHGB3-202ENST00000618934 CNBPP62633 177 aaKnown RBP12.11□□□□□ -0.47
PCDHGB3-202ENST00000618934 TMEM254Q8TBM7 123 aa12.11□□□□□ -0.47
PCDHGB3-202ENST00000618934 APLNQ9ULZ1 77 aa12.1□□□□□ -0.47
PCDHGB3-202ENST00000618934 DSCR10P59022 87 aa12.1□□□□□ -0.47
PCDHGB3-202ENST00000618934 UBE2DNLQ8IWF7 75 aa12.08□□□□□ -0.48
PCDHGB3-202ENST00000618934 A0A1B0GW54 56 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms