RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 NREPQ16612 68 aa11.42□□□□□ -0.58
DDX1-207ENST00000617198 OXLD1Q5BKU9 147 aa11.42□□□□□ -0.58
DDX1-207ENST00000617198 TEP1Q99973 2627 aaKnown RBP11.42□□□□□ -0.58
DDX1-207ENST00000617198 BPY2O14599 106 aa11.42□□□□□ -0.58
DDX1-207ENST00000617198 C4orf26Q17RF5 130 aa11.42□□□□□ -0.58
DDX1-207ENST00000617198 EPM2AB3EWF7 344 aa11.41□□□□□ -0.58
DDX1-207ENST00000617198 F8WEM9 126 aa11.41□□□□□ -0.58
DDX1-207ENST00000617198 SERTAD4-AS1Q5TG53 156 aa11.41□□□□□ -0.58
DDX1-207ENST00000617198 C7orf33Q8WU49 177 aa11.41□□□□□ -0.58
DDX1-207ENST00000617198 KRTAP10-11P60412 298 aa11.4□□□□□ -0.58
DDX1-207ENST00000617198 IGKV4-1P06312 121 aa11.4□□□□□ -0.58
DDX1-207ENST00000617198 Q8N9L7 120 aa11.4□□□□□ -0.58
DDX1-207ENST00000617198 DEFB105AQ8NG35 78 aa11.4□□□□□ -0.58
DDX1-207ENST00000617198 NDUFC1O43677 76 aa11.39□□□□□ -0.59
DDX1-207ENST00000617198 Q8N377 158 aa11.39□□□□□ -0.59
DDX1-207ENST00000617198 DEFB131BA0A096LNP1 70 aa11.38□□□□□ -0.59
DDX1-207ENST00000617198 C3orf84H3BNL1 204 aa11.38□□□□□ -0.59
DDX1-207ENST00000617198 IGLV5-48A0A075B6I7 105 aa11.37□□□□□ -0.59
DDX1-207ENST00000617198 ERC2-IT1O76042 136 aa11.36□□□□□ -0.59
DDX1-207ENST00000617198 TLX1NBP0CAT3 122 aa11.35□□□□□ -0.59
DDX1-207ENST00000617198 DHRS4-AS1Q9P1J3 65 aa11.35□□□□□ -0.59
DDX1-207ENST00000617198 PLA2G2DQ9UNK4 145 aa11.35□□□□□ -0.59
DDX1-207ENST00000617198 DNAH10OSP0CZ25 163 aa11.35□□□□□ -0.59
DDX1-207ENST00000617198 HRCT1Q6UXD1 115 aa11.35□□□□□ -0.59
DDX1-207ENST00000617198 TMEM254Q8TBM7 123 aa11.35□□□□□ -0.59
DDX1-207ENST00000617198 C11orf45Q8TAV5 145 aa11.34□□□□□ -0.59
DDX1-207ENST00000617198 Q6ZRX8 168 aa11.34□□□□□ -0.59
DDX1-207ENST00000617198 PKD1L1Q8TDX9 2849 aa11.33□□□□□ -0.6
DDX1-207ENST00000617198 HECTD1Q9ULT8 2610 aa11.32□□□□□ -0.6
DDX1-207ENST00000617198 RPL37AP8A6NKH3 93 aa11.32□□□□□ -0.6
DDX1-207ENST00000617198 KRTAP4-16G5E9R7 235 aaPredicted RBP11.32□□□□□ -0.6
DDX1-207ENST00000617198 PRYO14603 147 aa11.32□□□□□ -0.6
DDX1-207ENST00000617198 FUSP35637 526 aaKnown RBP eCLIP11.32□□□□□ -0.6
DDX1-207ENST00000617198 OCR1Q9BZK8 76 aa11.32□□□□□ -0.6
DDX1-207ENST00000617198 A0A1B0GW54 56 aa11.31□□□□□ -0.6
DDX1-207ENST00000617198 ATP5EP56381 51 aaPredicted RBP11.31□□□□□ -0.6
DDX1-207ENST00000617198 Q9BRP9 147 aa11.31□□□□□ -0.6
DDX1-207ENST00000617198 IGLV1-50A0A075B6I6 118 aa11.3□□□□□ -0.6
DDX1-207ENST00000617198 IGLV5-37A0A075B6J1 123 aa11.3□□□□□ -0.6
DDX1-207ENST00000617198 FAM168BA1KXE4 195 aa11.29□□□□□ -0.6
DDX1-207ENST00000617198 SPRR1AP35321 89 aa11.29□□□□□ -0.6
DDX1-207ENST00000617198 MRAPQ8TCY5 172 aa11.29□□□□□ -0.6
DDX1-207ENST00000617198 ETDCA0A1B0GVM5 59 aa11.29□□□□□ -0.6
DDX1-207ENST00000617198 A0A1W2PNM2 257 aa11.28□□□□□ -0.6
DDX1-207ENST00000617198 TNP2Q05952 138 aa11.28□□□□□ -0.6
DDX1-207ENST00000617198 C1orf137Q5JT78 98 aa11.26□□□□□ -0.61
DDX1-207ENST00000617198 SMIM26A0A096LP01 95 aa11.25□□□□□ -0.61
DDX1-207ENST00000617198 A0A0U1RQV1 116 aa11.25□□□□□ -0.61
DDX1-207ENST00000617198 ST20-AS1Q8NBB2 130 aa11.25□□□□□ -0.61
DDX1-207ENST00000617198 CASC10Q5T4H9 136 aa11.25□□□□□ -0.61
DDX1-207ENST00000617198 KRTAP7-1Q8IUC3 87 aa11.24□□□□□ -0.61
DDX1-207ENST00000617198 Q8NBF4 154 aa11.24□□□□□ -0.61
DDX1-207ENST00000617198 TENM3Q9P273 2699 aa11.23□□□□□ -0.61
DDX1-207ENST00000617198 LINC00588Q9Y4M8 146 aa11.23□□□□□ -0.61
DDX1-207ENST00000617198 MRPL55Q7Z7F7 128 aaKnown RBP11.22□□□□□ -0.61
DDX1-207ENST00000617198 ANK2Q01484 3957 aa11.22□□□□□ -0.61
DDX1-207ENST00000617198 FP248Q71RG6 208 aaPredicted RBP11.21□□□□□ -0.61
DDX1-207ENST00000617198 SPRR4Q96PI1 79 aa11.21□□□□□ -0.62
DDX1-207ENST00000617198 SMIM29Q86T20 159 aa11.2□□□□□ -0.62
DDX1-207ENST00000617198 UBE2BP63146 152 aa11.19□□□□□ -0.62
DDX1-207ENST00000617198 HIGD2AQ9BW72 106 aa11.19□□□□□ -0.62
DDX1-207ENST00000617198 FAM30AQ9NZY2 134 aa11.17□□□□□ -0.62
DDX1-207ENST00000617198 DSCR10P59022 87 aa11.15□□□□□ -0.62
DDX1-207ENST00000617198 REG3GQ6UW15 175 aa11.15□□□□□ -0.62
DDX1-207ENST00000617198 LINC00474Q9P2X8 69 aa11.15□□□□□ -0.62
DDX1-207ENST00000617198 LCE6AA0A183 80 aa11.13□□□□□ -0.63
DDX1-207ENST00000617198 KRTAP24-1Q3LI83 254 aa11.12□□□□□ -0.63
DDX1-207ENST00000617198 DNAH1Q9P2D7 4330 aa11.12□□□□□ -0.63
DDX1-207ENST00000617198 K7EQZ3 153 aa11.11□□□□□ -0.63
DDX1-207ENST00000617198 CMYA5Q8N3K9 4069 aa11.11□□□□□ -0.63
DDX1-207ENST00000617198 LINC00476Q8WZB0 136 aa11.11□□□□□ -0.63
DDX1-207ENST00000617198 LINC00336Q6ZUF6 198 aa11.1□□□□□ -0.63
DDX1-207ENST00000617198 FAM229BQ4G0N7 80 aa11.09□□□□□ -0.63
DDX1-207ENST00000617198 DNAH3Q8TD57 4116 aa11.06□□□□□ -0.64
DDX1-207ENST00000617198 IGFL1Q6UW32 110 aa11.06□□□□□ -0.64
DDX1-207ENST00000617198 HCG22E2RYF7 251 aa11.05□□□□□ -0.64
DDX1-207ENST00000617198 PRO0628Q9UI54 55 aa11.05□□□□□ -0.64
DDX1-207ENST00000617198 FLNBO75369 2602 aaKnown RBP11.04□□□□□ -0.64
DDX1-207ENST00000617198 A0A0G2JQZ4 141 aa11.04□□□□□ -0.64
DDX1-207ENST00000617198 A0A1W2PNN7 141 aa11.04□□□□□ -0.64
DDX1-207ENST00000617198 PSCAO43653 123 aa11.04□□□□□ -0.64
DDX1-207ENST00000617198 ZCCHC13Q8WW36 166 aaKnown RBP11.04□□□□□ -0.64
DDX1-207ENST00000617198 A0A096LNI7 61 aa11.03□□□□□ -0.64
DDX1-207ENST00000617198 PRLHP81277 87 aa11.02□□□□□ -0.64
DDX1-207ENST00000617198 C16orf90A8MZG2 172 aa11.02□□□□□ -0.65
DDX1-207ENST00000617198 PRB2P02812 416 aaPredicted RBP11.01□□□□□ -0.65
DDX1-207ENST00000617198 IGKV2-24A0A0C4DH68 120 aa11.01□□□□□ -0.65
DDX1-207ENST00000617198 IGLV8-61A0A075B6I0 122 aa11□□□□□ -0.65
DDX1-207ENST00000617198 MPLKIPQ8TAP9 179 aa11□□□□□ -0.65
DDX1-207ENST00000617198 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.99□□□□□ -0.65
DDX1-207ENST00000617198 FBN1P35555 2871 aaKnown RBP10.98□□□□□ -0.65
DDX1-207ENST00000617198 STAB1Q9NY15 2570 aa10.98□□□□□ -0.65
DDX1-207ENST00000617198 A0A087WSZ3 146 aa10.98□□□□□ -0.65
DDX1-207ENST00000617198 CNBPP62633 177 aaKnown RBP10.98□□□□□ -0.65
DDX1-207ENST00000617198 DEFB116Q30KQ4 102 aa10.98□□□□□ -0.65
DDX1-207ENST00000617198 hDV103S1A0JD37 113 aa10.97□□□□□ -0.65
DDX1-207ENST00000617198 MAST4O15021 2626 aa10.96□□□□□ -0.65
DDX1-207ENST00000617198 F8P00451 2351 aa10.96□□□□□ -0.65
DDX1-207ENST00000617198 KRTAP1-5Q9BYS1 174 aa10.96□□□□□ -0.66
DDX1-207ENST00000617198 UBE2AP49459 152 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms