RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 CBY1Q9Y3M2 126 aa12.92□□□□□ -0.34
CBWD3-212ENST00000616550 ATOH7Q8N100 152 aa12.91□□□□□ -0.34
CBWD3-212ENST00000616550 S100A2P29034 98 aa12.9□□□□□ -0.34
CBWD3-212ENST00000616550 SCGB1D4Q6XE38 83 aa12.9□□□□□ -0.34
CBWD3-212ENST00000616550 Q6ZRX8 168 aa12.9□□□□□ -0.34
CBWD3-212ENST00000616550 ANKRD39Q53RE8 183 aa12.89□□□□□ -0.35
CBWD3-212ENST00000616550 PPDPFQ9H3Y8 114 aa12.89□□□□□ -0.35
CBWD3-212ENST00000616550 ZNF73O43830 326 aaPredicted RBP12.88□□□□□ -0.35
CBWD3-212ENST00000616550 JOSD1Q15040 202 aaPredicted RBP12.88□□□□□ -0.35
CBWD3-212ENST00000616550 OR13C6PQ8NH95 151 aa12.88□□□□□ -0.35
CBWD3-212ENST00000616550 HINT1P49773 126 aaPredicted RBP12.87□□□□□ -0.35
CBWD3-212ENST00000616550 Q9BRP9 147 aa12.87□□□□□ -0.35
CBWD3-212ENST00000616550 ERC2-IT1O76042 136 aa12.86□□□□□ -0.35
CBWD3-212ENST00000616550 CTAG1AP78358 180 aa12.86□□□□□ -0.35
CBWD3-212ENST00000616550 GAGE2AQ6NT46 116 aa12.86□□□□□ -0.35
CBWD3-212ENST00000616550 HIST3H2BBQ8N257 126 aa12.86□□□□□ -0.35
CBWD3-212ENST00000616550 S100A6P06703 90 aa12.85□□□□□ -0.35
CBWD3-212ENST00000616550 LINC00518Q8N0U6 118 aa12.85□□□□□ -0.35
CBWD3-212ENST00000616550 SPANXDQ9BXN6 97 aa12.85□□□□□ -0.35
CBWD3-212ENST00000616550 SNRPEP62304 92 aaKnown RBP12.84□□□□□ -0.35
CBWD3-212ENST00000616550 LINC00483Q53H64 154 aa12.84□□□□□ -0.35
CBWD3-212ENST00000616550 COPS9Q8WXC6 57 aa12.84□□□□□ -0.35
CBWD3-212ENST00000616550 HIST1H2BLQ99880 126 aa12.84□□□□□ -0.35
CBWD3-212ENST00000616550 SPAG11AQ6PDA7 123 aa12.83□□□□□ -0.36
CBWD3-212ENST00000616550 C4orf48Q5BLP8 95 aa12.82□□□□□ -0.36
CBWD3-212ENST00000616550 PCP2Q8IVA1 136 aa12.82□□□□□ -0.36
CBWD3-212ENST00000616550 IFITM1P13164 125 aa12.8□□□□□ -0.36
CBWD3-212ENST00000616550 Q6ZVH6 145 aa12.79□□□□□ -0.36
CBWD3-212ENST00000616550 RETNLBQ9BQ08 111 aa12.79□□□□□ -0.36
CBWD3-212ENST00000616550 LPAP08519 4548 aa12.78□□□□□ -0.36
CBWD3-212ENST00000616550 Q8NBF4 154 aa12.78□□□□□ -0.36
CBWD3-212ENST00000616550 HSBP1L1C9JCN9 74 aa12.77□□□□□ -0.37
CBWD3-212ENST00000616550 IGLV9-49A0A0B4J1Y8 123 aa12.76□□□□□ -0.37
CBWD3-212ENST00000616550 MUSTN1Q8IVN3 82 aa12.74□□□□□ -0.37
CBWD3-212ENST00000616550 C5orf52A6NGY3 159 aa12.73□□□□□ -0.37
CBWD3-212ENST00000616550 MOBPQ13875 183 aa12.73□□□□□ -0.37
CBWD3-212ENST00000616550 SSBP3-AS1Q7Z2R9 100 aa12.73□□□□□ -0.37
CBWD3-212ENST00000616550 DHRS4-AS1Q9P1J3 65 aa12.73□□□□□ -0.37
CBWD3-212ENST00000616550 ST20-AS1Q8NBB2 130 aa12.72□□□□□ -0.37
CBWD3-212ENST00000616550 COX7BP24311 80 aa12.71□□□□□ -0.37
CBWD3-212ENST00000616550 C6orf99Q4VX62 202 aa12.71□□□□□ -0.37
CBWD3-212ENST00000616550 A6NDN8 102 aa12.7□□□□□ -0.38
CBWD3-212ENST00000616550 SPINK1P00995 79 aa12.7□□□□□ -0.38
CBWD3-212ENST00000616550 RNF213Q63HN8 5207 aa12.69□□□□□ -0.38
CBWD3-212ENST00000616550 ELOF1P60002 83 aaKnown RBP12.69□□□□□ -0.38
CBWD3-212ENST00000616550 IGLV7-46A0A075B6I9 117 aa12.68□□□□□ -0.38
CBWD3-212ENST00000616550 SCGB1D1O95968 90 aa12.68□□□□□ -0.38
CBWD3-212ENST00000616550 C9orf153Q5TBE3 101 aa12.67□□□□□ -0.38
CBWD3-212ENST00000616550 TRBV7-6A0A0J9YX20 115 aa12.66□□□□□ -0.38
CBWD3-212ENST00000616550 TRAV13-2A0A0B4J235 113 aa12.65□□□□□ -0.38
CBWD3-212ENST00000616550 SLC25A34Q6PIV7 304 aa12.65□□□□□ -0.38
CBWD3-212ENST00000616550 A0A1B0GWB2 263 aa12.62□□□□□ -0.39
CBWD3-212ENST00000616550 SPRR1BP22528 89 aa12.62□□□□□ -0.39
CBWD3-212ENST00000616550 TPRXLQ17RH7 258 aa12.62□□□□□ -0.39
CBWD3-212ENST00000616550 TAL2Q16559 108 aa12.61□□□□□ -0.39
CBWD3-212ENST00000616550 FP248Q71RG6 208 aaPredicted RBP12.61□□□□□ -0.39
CBWD3-212ENST00000616550 RPS29P62273 56 aaKnown RBP12.6□□□□□ -0.39
CBWD3-212ENST00000616550 CDIP1Q9H305 208 aa12.6□□□□□ -0.39
CBWD3-212ENST00000616550 LAMTOR3Q9UHA4 124 aa12.6□□□□□ -0.39
CBWD3-212ENST00000616550 DEFB105AQ8NG35 78 aa12.58□□□□□ -0.4
CBWD3-212ENST00000616550 A4D1N5 150 aa12.57□□□□□ -0.4
CBWD3-212ENST00000616550 SMIM11BQ8TCY0 68 aa12.57□□□□□ -0.4
CBWD3-212ENST00000616550 TEX49A0A1B0GTD5 131 aa12.55□□□□□ -0.4
CBWD3-212ENST00000616550 COX8AP10176 69 aa12.54□□□□□ -0.4
CBWD3-212ENST00000616550 Q8N377 158 aa12.54□□□□□ -0.4
CBWD3-212ENST00000616550 SLC25A20O43772 301 aa12.53□□□□□ -0.4
CBWD3-212ENST00000616550 HIST1H4GQ99525 98 aa12.53□□□□□ -0.4
CBWD3-212ENST00000616550 NHP2Q9NX24 153 aaKnown RBP12.53□□□□□ -0.4
CBWD3-212ENST00000616550 VAMP3Q15836 100 aa12.52□□□□□ -0.41
CBWD3-212ENST00000616550 Q1RN00 199 aa12.51□□□□□ -0.41
CBWD3-212ENST00000616550 DLEU1O43261 78 aa12.49□□□□□ -0.41
CBWD3-212ENST00000616550 PAM16Q9Y3D7 125 aa12.47□□□□□ -0.41
CBWD3-212ENST00000616550 IGLV5-48A0A075B6I7 105 aa12.46□□□□□ -0.41
CBWD3-212ENST00000616550 HRCT1Q6UXD1 115 aa12.46□□□□□ -0.41
CBWD3-212ENST00000616550 C14orf144Q96I85 54 aa12.46□□□□□ -0.41
CBWD3-212ENST00000616550 LINC01547P58512 204 aaPredicted RBP12.45□□□□□ -0.42
CBWD3-212ENST00000616550 KRTAP13-3Q3SY46 172 aa12.45□□□□□ -0.42
CBWD3-212ENST00000616550 SPATA45Q537H7 98 aa12.45□□□□□ -0.42
CBWD3-212ENST00000616550 C12orf57Q99622 126 aa12.45□□□□□ -0.42
CBWD3-212ENST00000616550 PRO1933Q9H354 126 aa12.45□□□□□ -0.42
CBWD3-212ENST00000616550 SMIM29Q86T20 159 aa12.44□□□□□ -0.42
CBWD3-212ENST00000616550 VAMP8Q9BV40 100 aa12.44□□□□□ -0.42
CBWD3-212ENST00000616550 LIMD2Q9BT23 127 aa12.43□□□□□ -0.42
CBWD3-212ENST00000616550 LINC00575Q6W349 94 aa12.42□□□□□ -0.42
CBWD3-212ENST00000616550 hADV29S1A0JD25 119 aa12.4□□□□□ -0.42
CBWD3-212ENST00000616550 CD164Q04900 197 aa12.4□□□□□ -0.42
CBWD3-212ENST00000616550 HIGD1BQ9P298 99 aa12.4□□□□□ -0.42
CBWD3-212ENST00000616550 H7C2G1 150 aa12.38□□□□□ -0.43
CBWD3-212ENST00000616550 A0A0U1RQV1 116 aa12.37□□□□□ -0.43
CBWD3-212ENST00000616550 BVES-AS1Q5T3Y7 98 aa12.37□□□□□ -0.43
CBWD3-212ENST00000616550 CFC1BP0CG36 223 aa12.35□□□□□ -0.43
CBWD3-212ENST00000616550 CFC1P0CG37 223 aa12.35□□□□□ -0.43
CBWD3-212ENST00000616550 Q6ZQY7 126 aa12.35□□□□□ -0.43
CBWD3-212ENST00000616550 RAB37Q96AX2 223 aa12.35□□□□□ -0.43
CBWD3-212ENST00000616550 F8WEM9 126 aa12.33□□□□□ -0.44
CBWD3-212ENST00000616550 C2orf91Q6ZV80 131 aa12.32□□□□□ -0.44
CBWD3-212ENST00000616550 A0A0B4J2C4 111 aa12.3□□□□□ -0.44
CBWD3-212ENST00000616550 A0A0G2JQZ4 141 aa12.3□□□□□ -0.44
CBWD3-212ENST00000616550 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.3□□□□□ -0.44
CBWD3-212ENST00000616550 CEND1Q8N111 149 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms