RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 INAFM1C9JVW0 142 aa8.82□□□□□ -1
MSH6-214ENST00000616033 PRYO14603 147 aa8.81□□□□□ -1
MSH6-214ENST00000616033 IGLV6-57P01721 117 aa8.81□□□□□ -1
MSH6-214ENST00000616033 CXCL6P80162 114 aa8.8□□□□□ -1
MSH6-214ENST00000616033 A8MUN3 132 aa8.8□□□□□ -1
MSH6-214ENST00000616033 TRBV7-4A0A0J9YYF1 115 aa8.79□□□□□ -1
MSH6-214ENST00000616033 PDE6GP18545 87 aa8.78□□□□□ -1
MSH6-214ENST00000616033 EPM2AB3EWF7 344 aa8.77□□□□□ -1
MSH6-214ENST00000616033 NSD1Q96L73 2696 aaPredicted RBP8.77□□□□□ -1.01
MSH6-214ENST00000616033 RPL37AP8A6NKH3 93 aa8.77□□□□□ -1.01
MSH6-214ENST00000616033 DEFB116Q30KQ4 102 aa8.77□□□□□ -1.01
MSH6-214ENST00000616033 ANK3Q12955 4377 aaKnown RBP8.77□□□□□ -1.01
MSH6-214ENST00000616033 Q6ZRU5 148 aa8.76□□□□□ -1.01
MSH6-214ENST00000616033 SMIM29Q86T20 159 aa8.76□□□□□ -1.01
MSH6-214ENST00000616033 TRRAPQ9Y4A5 3859 aa8.75□□□□□ -1.01
MSH6-214ENST00000616033 A0A0G2JQZ4 141 aa8.75□□□□□ -1.01
MSH6-214ENST00000616033 A0A1W2PNN7 141 aa8.75□□□□□ -1.01
MSH6-214ENST00000616033 WFDC10BQ8IUB3 73 aa8.75□□□□□ -1.01
MSH6-214ENST00000616033 IGKV4-1P06312 121 aa8.74□□□□□ -1.01
MSH6-214ENST00000616033 IGKV2D-24A0A075B6R9 120 aa8.73□□□□□ -1.01
MSH6-214ENST00000616033 NDUFC1O43677 76 aa8.73□□□□□ -1.01
MSH6-214ENST00000616033 ELOF1P60002 83 aaKnown RBP8.73□□□□□ -1.01
MSH6-214ENST00000616033 CHKB-CPT1BH3BT56 60 aa8.73□□□□□ -1.01
MSH6-214ENST00000616033 C9orf66Q5T8R8 295 aa8.73□□□□□ -1.01
MSH6-214ENST00000616033 MAST4O15021 2626 aa8.73□□□□□ -1.01
MSH6-214ENST00000616033 STAB1Q9NY15 2570 aa8.73□□□□□ -1.01
MSH6-214ENST00000616033 Q6ZRP5 223 aa8.73□□□□□ -1.01
MSH6-214ENST00000616033 NOTCH1P46531 2555 aa8.72□□□□□ -1.01
MSH6-214ENST00000616033 A0A0J9YWU9 116 aa8.72□□□□□ -1.01
MSH6-214ENST00000616033 IGHV4-30-4P0DP06 118 aa8.72□□□□□ -1.01
MSH6-214ENST00000616033 C1orf64Q8NEQ6 169 aa8.72□□□□□ -1.01
MSH6-214ENST00000616033 NKAPP1Q8N9T2 125 aa8.71□□□□□ -1.01
MSH6-214ENST00000616033 KRTAP10-3P60369 221 aa8.71□□□□□ -1.02
MSH6-214ENST00000616033 LYRM9A8MSI8 78 aa8.7□□□□□ -1.02
MSH6-214ENST00000616033 VPREB1P12018 145 aa8.7□□□□□ -1.02
MSH6-214ENST00000616033 LELP1Q5T871 98 aa8.7□□□□□ -1.02
MSH6-214ENST00000616033 TRAV22A0A0B4J277 110 aa8.7□□□□□ -1.02
MSH6-214ENST00000616033 M0R378 163 aa8.69□□□□□ -1.02
MSH6-214ENST00000616033 SPART-AS1P0CW21 52 aa8.69□□□□□ -1.02
MSH6-214ENST00000616033 LINC00612Q8N6U2 182 aa8.69□□□□□ -1.02
MSH6-214ENST00000616033 ST20-AS1Q8NBB2 130 aa8.68□□□□□ -1.02
MSH6-214ENST00000616033 BCE1O60756 84 aa8.68□□□□□ -1.02
MSH6-214ENST00000616033 C11orf45Q8TAV5 145 aa8.68□□□□□ -1.02
MSH6-214ENST00000616033 TENM3Q9P273 2699 aa8.67□□□□□ -1.02
MSH6-214ENST00000616033 COL6A5A8TX70 2615 aa8.67□□□□□ -1.02
MSH6-214ENST00000616033 Q6ZTC4 211 aa8.67□□□□□ -1.02
MSH6-214ENST00000616033 OCR1Q9BZK8 76 aa8.67□□□□□ -1.02
MSH6-214ENST00000616033 RBM12B-AS1Q9P1G2 102 aa8.67□□□□□ -1.02
MSH6-214ENST00000616033 LINC00528Q8N1L1 170 aa8.67□□□□□ -1.02
MSH6-214ENST00000616033 ATP5EP56381 51 aaPredicted RBP8.66□□□□□ -1.02
MSH6-214ENST00000616033 NBEAL1Q6ZS30 2694 aa8.66□□□□□ -1.02
MSH6-214ENST00000616033 WFDC13Q8IUB5 93 aa8.66□□□□□ -1.02
MSH6-214ENST00000616033 KPRPQ5T749 579 aaPredicted RBP8.65□□□□□ -1.02
MSH6-214ENST00000616033 CD164Q04900 197 aa8.65□□□□□ -1.03
MSH6-214ENST00000616033 FAM168BA1KXE4 195 aa8.64□□□□□ -1.03
MSH6-214ENST00000616033 SERTAD4-AS1Q5TG53 156 aa8.64□□□□□ -1.03
MSH6-214ENST00000616033 PRR15Q8IV56 129 aa8.64□□□□□ -1.03
MSH6-214ENST00000616033 Q8N377 158 aa8.64□□□□□ -1.03
MSH6-214ENST00000616033 PRR15LQ9BU68 103 aa8.64□□□□□ -1.03
MSH6-214ENST00000616033 APOC4P55056 127 aa8.63□□□□□ -1.03
MSH6-214ENST00000616033 UBE2BP63146 152 aa8.63□□□□□ -1.03
MSH6-214ENST00000616033 SRRM2Q9UQ35 2752 aaKnown RBP8.63□□□□□ -1.03
MSH6-214ENST00000616033 C1orf137Q5JT78 98 aa8.63□□□□□ -1.03
MSH6-214ENST00000616033 hDV103S1A0JD37 113 aa8.62□□□□□ -1.03
MSH6-214ENST00000616033 PRR34Q9NV39 138 aa8.62□□□□□ -1.03
MSH6-214ENST00000616033 A6NED7 52 aa8.61□□□□□ -1.03
MSH6-214ENST00000616033 K7EQZ3 153 aa8.61□□□□□ -1.03
MSH6-214ENST00000616033 Q8NAQ8 132 aa8.61□□□□□ -1.03
MSH6-214ENST00000616033 C7orf33Q8WU49 177 aa8.61□□□□□ -1.03
MSH6-214ENST00000616033 ETDCA0A1B0GVM5 59 aa8.61□□□□□ -1.03
MSH6-214ENST00000616033 H3BQ85 93 aa8.61□□□□□ -1.03
MSH6-214ENST00000616033 EGFEM1PQ0D2K5 195 aa8.61□□□□□ -1.03
MSH6-214ENST00000616033 FBN1P35555 2871 aaKnown RBP8.61□□□□□ -1.03
MSH6-214ENST00000616033 A0A1W2PNM2 257 aa8.6□□□□□ -1.03
MSH6-214ENST00000616033 SYCNQ0VAF6 134 aa8.6□□□□□ -1.03
MSH6-214ENST00000616033 C15orf56Q8N910 161 aa8.6□□□□□ -1.03
MSH6-214ENST00000616033 GVQW2A0A096LPI5 108 aaPredicted RBP8.57□□□□□ -1.04
MSH6-214ENST00000616033 C4orf48Q5BLP8 95 aa8.57□□□□□ -1.04
MSH6-214ENST00000616033 A0A096LNI7 61 aa8.57□□□□□ -1.04
MSH6-214ENST00000616033 HCG22E2RYF7 251 aa8.57□□□□□ -1.04
MSH6-214ENST00000616033 ERC2-IT1O76042 136 aa8.57□□□□□ -1.04
MSH6-214ENST00000616033 CSMD3Q7Z407 3707 aa8.56□□□□□ -1.04
MSH6-214ENST00000616033 RPL37AP61513 92 aaKnown RBP8.56□□□□□ -1.04
MSH6-214ENST00000616033 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.54□□□□□ -1.04
MSH6-214ENST00000616033 Q9BRP9 147 aa8.54□□□□□ -1.04
MSH6-214ENST00000616033 OXLD1Q5BKU9 147 aa8.53□□□□□ -1.04
MSH6-214ENST00000616033 LINC00208Q96KT6 92 aa8.53□□□□□ -1.04
MSH6-214ENST00000616033 C16orf90A8MZG2 172 aa8.52□□□□□ -1.04
MSH6-214ENST00000616033 IGKV2-24A0A0C4DH68 120 aa8.52□□□□□ -1.05
MSH6-214ENST00000616033 CASC10Q5T4H9 136 aa8.52□□□□□ -1.05
MSH6-214ENST00000616033 DSCR10P59022 87 aa8.51□□□□□ -1.05
MSH6-214ENST00000616033 MGAM2Q2M2H8 2515 aa8.51□□□□□ -1.05
MSH6-214ENST00000616033 PSCAO43653 123 aa8.5□□□□□ -1.05
MSH6-214ENST00000616033 KTN1-AS1Q86SY8 53 aa8.5□□□□□ -1.05
MSH6-214ENST00000616033 A0A087WSZ3 146 aa8.5□□□□□ -1.05
MSH6-214ENST00000616033 PRLHP81277 87 aa8.49□□□□□ -1.05
MSH6-214ENST00000616033 Q6ZRX8 168 aa8.49□□□□□ -1.05
MSH6-214ENST00000616033 Q8NBF4 154 aa8.49□□□□□ -1.05
MSH6-214ENST00000616033 Q5VV11 94 aa8.49□□□□□ -1.05
MSH6-214ENST00000616033 PRAC1Q96KF2 57 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms