RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 A0A087WTM6 91 aa10.31□□□□□ -0.76
TNXB-208ENST00000611016 SMR3BP02814 79 aaPredicted RBP10.3□□□□□ -0.76
TNXB-208ENST00000611016 KRTAP1-3Q8IUG1 177 aa10.3□□□□□ -0.76
TNXB-208ENST00000611016 K7EQZ3 153 aa10.28□□□□□ -0.76
TNXB-208ENST00000611016 PRR15Q8IV56 129 aa10.27□□□□□ -0.77
TNXB-208ENST00000611016 IGFL1Q6UW32 110 aa10.26□□□□□ -0.77
TNXB-208ENST00000611016 C8orf17Q9NRJ1 99 aa10.26□□□□□ -0.77
TNXB-208ENST00000611016 ZNF861PO60384 105 aa10.26□□□□□ -0.77
TNXB-208ENST00000611016 LINC00304Q8N9R0 145 aa10.26□□□□□ -0.77
TNXB-208ENST00000611016 C9orf129Q5T035 196 aaKnown RBP10.25□□□□□ -0.77
TNXB-208ENST00000611016 COA5Q86WW8 74 aa10.25□□□□□ -0.77
TNXB-208ENST00000611016 HECTD1Q9ULT8 2610 aa10.24□□□□□ -0.77
TNXB-208ENST00000611016 A0A1B0GVX0 72 aa10.24□□□□□ -0.77
TNXB-208ENST00000611016 KRTAP1-1Q07627 177 aa10.24□□□□□ -0.77
TNXB-208ENST00000611016 FLNBO75369 2602 aaKnown RBP10.23□□□□□ -0.77
TNXB-208ENST00000611016 COX6B2Q6YFQ2 88 aa10.23□□□□□ -0.77
TNXB-208ENST00000611016 UQCR11O14957 56 aa10.23□□□□□ -0.77
TNXB-208ENST00000611016 KLKP1Q107X0 134 aa10.22□□□□□ -0.77
TNXB-208ENST00000611016 C9orf163Q8N9P6 203 aa10.22□□□□□ -0.77
TNXB-208ENST00000611016 DSCR10P59022 87 aa10.22□□□□□ -0.77
TNXB-208ENST00000611016 APLNQ9ULZ1 77 aa10.22□□□□□ -0.77
TNXB-208ENST00000611016 IGLV8-61A0A075B6I0 122 aa10.22□□□□□ -0.77
TNXB-208ENST00000611016 C9orf92A6NGG3 77 aa10.2□□□□□ -0.78
TNXB-208ENST00000611016 EIF4EBP3O60516 100 aaPredicted RBP10.2□□□□□ -0.78
TNXB-208ENST00000611016 DNAH12Q6ZR08 3092 aa10.19□□□□□ -0.78
TNXB-208ENST00000611016 LINC01600Q96MT4 127 aa10.19□□□□□ -0.78
TNXB-208ENST00000611016 ANAPC11Q9NYG5 84 aa10.19□□□□□ -0.78
TNXB-208ENST00000611016 CASC10Q5T4H9 136 aa10.18□□□□□ -0.78
TNXB-208ENST00000611016 LINC00336Q6ZUF6 198 aa10.18□□□□□ -0.78
TNXB-208ENST00000611016 OBSCN-AS1Q96MR7 158 aa10.17□□□□□ -0.78
TNXB-208ENST00000611016 Q8N377 158 aa10.17□□□□□ -0.78
TNXB-208ENST00000611016 A0A0G2JQZ4 141 aa10.16□□□□□ -0.78
TNXB-208ENST00000611016 A0A1W2PNN7 141 aa10.16□□□□□ -0.78
TNXB-208ENST00000611016 CNBPP62633 177 aaKnown RBP10.16□□□□□ -0.78
TNXB-208ENST00000611016 IGLV7-43P04211 117 aa10.15□□□□□ -0.78
TNXB-208ENST00000611016 ZNF575Q86XF7 245 aa10.13□□□□□ -0.79
TNXB-208ENST00000611016 PSORS1C2Q9UIG4 136 aa10.13□□□□□ -0.79
TNXB-208ENST00000611016 IGLV5-37A0A075B6J1 123 aa10.13□□□□□ -0.79
TNXB-208ENST00000611016 UTRNP46939 3433 aa10.1□□□□□ -0.79
TNXB-208ENST00000611016 SPANXA2-OT1Q8N9U9 137 aa10.1□□□□□ -0.79
TNXB-208ENST00000611016 MGAM2Q2M2H8 2515 aa10.09□□□□□ -0.79
TNXB-208ENST00000611016 A8MUN3 132 aa10.09□□□□□ -0.79
TNXB-208ENST00000611016 USP24Q9UPU5 2620 aa10.09□□□□□ -0.79
TNXB-208ENST00000611016 SPINT4Q6UDR6 99 aa10.09□□□□□ -0.79
TNXB-208ENST00000611016 PRRC2CQ9Y520 2896 aaKnown RBP10.09□□□□□ -0.79
TNXB-208ENST00000611016 MIR22HGQ0VDD5 57 aa10.08□□□□□ -0.8
TNXB-208ENST00000611016 SPRR4Q96PI1 79 aa10.08□□□□□ -0.8
TNXB-208ENST00000611016 CRIPTQ9P021 101 aa10.06□□□□□ -0.8
TNXB-208ENST00000611016 H7BZZ5 65 aa10.04□□□□□ -0.8
TNXB-208ENST00000611016 CD164Q04900 197 aa10.03□□□□□ -0.8
TNXB-208ENST00000611016 RBM12B-AS1Q9P1G2 102 aa10.03□□□□□ -0.8
TNXB-208ENST00000611016 TNP2Q05952 138 aa10.01□□□□□ -0.81
TNXB-208ENST00000611016 IGLV5-48A0A075B6I7 105 aa10.01□□□□□ -0.81
TNXB-208ENST00000611016 A0A1W2PNM2 257 aa9.98□□□□□ -0.81
TNXB-208ENST00000611016 BPTFQ12830 3046 aa9.94□□□□□ -0.82
TNXB-208ENST00000611016 FAM104AQ969W3 186 aa9.94□□□□□ -0.82
TNXB-208ENST00000611016 FLNAP21333 2647 aaKnown RBP9.93□□□□□ -0.82
TNXB-208ENST00000611016 CEP350Q5VT06 3117 aa9.92□□□□□ -0.82
TNXB-208ENST00000611016 ITPR3Q14573 2671 aa9.89□□□□□ -0.83
TNXB-208ENST00000611016 CDC42SE1Q9NRR8 79 aa9.89□□□□□ -0.83
TNXB-208ENST00000611016 HELZ2Q9BYK8 2649 aaKnown RBP9.88□□□□□ -0.83
TNXB-208ENST00000611016 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.87□□□□□ -0.83
TNXB-208ENST00000611016 KTN1-AS1Q86SY8 53 aa9.87□□□□□ -0.83
TNXB-208ENST00000611016 WIPF1O43516 503 aa9.86□□□□□ -0.83
TNXB-208ENST00000611016 FAM229BQ4G0N7 80 aa9.85□□□□□ -0.83
TNXB-208ENST00000611016 C5orf42Q9H799 3197 aa9.85□□□□□ -0.83
TNXB-208ENST00000611016 LCA10Q71F78 164 aa9.85□□□□□ -0.83
TNXB-208ENST00000611016 Q8N1X5 172 aa9.85□□□□□ -0.83
TNXB-208ENST00000611016 PRR26Q8N8Z3 221 aa9.83□□□□□ -0.84
TNXB-208ENST00000611016 LINC01554Q52M75 96 aa9.82□□□□□ -0.84
TNXB-208ENST00000611016 OCR1Q9BZK8 76 aa9.81□□□□□ -0.84
TNXB-208ENST00000611016 CHD7Q9P2D1 2997 aa9.8□□□□□ -0.84
TNXB-208ENST00000611016 ATRQ13535 2644 aa9.8□□□□□ -0.84
TNXB-208ENST00000611016 IGLV7-46A0A075B6I9 117 aa9.79□□□□□ -0.84
TNXB-208ENST00000611016 Q6ZSA8 131 aa9.79□□□□□ -0.84
TNXB-208ENST00000611016 Q1T7F1 81 aa9.79□□□□□ -0.84
TNXB-208ENST00000611016 MAST4O15021 2626 aa9.78□□□□□ -0.84
TNXB-208ENST00000611016 CFAP46Q8IYW2 2715 aa9.76□□□□□ -0.85
TNXB-208ENST00000611016 CR1P17927 2039 aa9.75□□□□□ -0.85
TNXB-208ENST00000611016 A0A0D9SG42 100 aa9.74□□□□□ -0.85
TNXB-208ENST00000611016 PLAC8Q9NZF1 115 aa9.71□□□□□ -0.86
TNXB-208ENST00000611016 SPRR1AP35321 89 aa9.68□□□□□ -0.86
TNXB-208ENST00000611016 SPRR1BP22528 89 aa9.66□□□□□ -0.86
TNXB-208ENST00000611016 Q75L30 129 aa9.66□□□□□ -0.86
TNXB-208ENST00000611016 M0R2T5 61 aa9.65□□□□□ -0.86
TNXB-208ENST00000611016 Q5XG85 94 aa9.65□□□□□ -0.87
TNXB-208ENST00000611016 HRES1P13985 223 aa9.63□□□□□ -0.87
TNXB-208ENST00000611016 A0A1B0GU33 70 aa9.63□□□□□ -0.87
TNXB-208ENST00000611016 ZCCHC13Q8WW36 166 aaKnown RBP9.63□□□□□ -0.87
TNXB-208ENST00000611016 MMP24-AS1A0A0U1RRL7 71 aa9.62□□□□□ -0.87
TNXB-208ENST00000611016 LUZP6Q538Z0 58 aa9.61□□□□□ -0.87
TNXB-208ENST00000611016 CHD9Q3L8U1 2897 aa9.61□□□□□ -0.87
TNXB-208ENST00000611016 PCNTO95613 3336 aa9.6□□□□□ -0.87
TNXB-208ENST00000611016 LINC01558Q9Y6Z2 57 aa9.6□□□□□ -0.87
TNXB-208ENST00000611016 CENPEQ02224 2701 aa9.59□□□□□ -0.87
TNXB-208ENST00000611016 Q8NDZ9 215 aa9.58□□□□□ -0.88
TNXB-208ENST00000611016 KRTAP1-5Q9BYS1 174 aa9.58□□□□□ -0.88
TNXB-208ENST00000611016 LINC00483Q53H64 154 aa9.57□□□□□ -0.88
TNXB-208ENST00000611016 DMAC1Q96GE9 116 aa9.56□□□□□ -0.88
TNXB-208ENST00000611016 CSAG1Q6PB30 78 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms