RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 C3orf84H3BNL1 204 aa11.18□□□□□ -0.62
TNIP1-220ENST00000610535 LINC00336Q6ZUF6 198 aa11.18□□□□□ -0.62
TNIP1-220ENST00000610535 FP248Q71RG6 208 aaPredicted RBP11.18□□□□□ -0.62
TNIP1-220ENST00000610535 LINC00474Q9P2X8 69 aa11.18□□□□□ -0.62
TNIP1-220ENST00000610535 EGFEM1PQ0D2K5 195 aa11.16□□□□□ -0.62
TNIP1-220ENST00000610535 KRTAP26-1Q6PEX3 210 aa11.16□□□□□ -0.62
TNIP1-220ENST00000610535 DEFB105AQ8NG35 78 aa11.16□□□□□ -0.62
TNIP1-220ENST00000610535 TMEM254Q8TBM7 123 aa11.16□□□□□ -0.62
TNIP1-220ENST00000610535 C15orf56Q8N910 161 aa11.15□□□□□ -0.62
TNIP1-220ENST00000610535 IGKV4-1P06312 121 aa11.14□□□□□ -0.63
TNIP1-220ENST00000610535 Q6ZRP5 223 aa11.14□□□□□ -0.63
TNIP1-220ENST00000610535 SMIM26A0A096LP01 95 aa11.12□□□□□ -0.63
TNIP1-220ENST00000610535 NDUFC1O43677 76 aa11.11□□□□□ -0.63
TNIP1-220ENST00000610535 COL6A5A8TX70 2615 aa11.11□□□□□ -0.63
TNIP1-220ENST00000610535 KPRPQ5T749 579 aaPredicted RBP11.11□□□□□ -0.63
TNIP1-220ENST00000610535 ANK2Q01484 3957 aa11.11□□□□□ -0.63
TNIP1-220ENST00000610535 TENM3Q9P273 2699 aa11.1□□□□□ -0.63
TNIP1-220ENST00000610535 OXLD1Q5BKU9 147 aa11.09□□□□□ -0.63
TNIP1-220ENST00000610535 OCR1Q9BZK8 76 aa11.08□□□□□ -0.64
TNIP1-220ENST00000610535 FAM229BQ4G0N7 80 aa11.08□□□□□ -0.64
TNIP1-220ENST00000610535 Q8N377 158 aa11.08□□□□□ -0.64
TNIP1-220ENST00000610535 RETNQ9HD89 108 aa11.08□□□□□ -0.64
TNIP1-220ENST00000610535 SERTAD4-AS1Q5TG53 156 aa11.06□□□□□ -0.64
TNIP1-220ENST00000610535 MPLKIPQ8TAP9 179 aa11.06□□□□□ -0.64
TNIP1-220ENST00000610535 HIGD2AQ9BW72 106 aa11.06□□□□□ -0.64
TNIP1-220ENST00000610535 IGKV2D-24A0A075B6R9 120 aa11.05□□□□□ -0.64
TNIP1-220ENST00000610535 ESRGQ1W209 222 aa11.05□□□□□ -0.64
TNIP1-220ENST00000610535 PRYO14603 147 aa11.05□□□□□ -0.64
TNIP1-220ENST00000610535 C1orf43Q9BWL3 253 aa11.05□□□□□ -0.64
TNIP1-220ENST00000610535 PRO0628Q9UI54 55 aa11.05□□□□□ -0.64
TNIP1-220ENST00000610535 ERC2-IT1O76042 136 aa11.04□□□□□ -0.64
TNIP1-220ENST00000610535 Q6ZTC4 211 aa11.04□□□□□ -0.64
TNIP1-220ENST00000610535 MRAPQ8TCY5 172 aa11.04□□□□□ -0.64
TNIP1-220ENST00000610535 C7orf33Q8WU49 177 aa11.04□□□□□ -0.64
TNIP1-220ENST00000610535 A0A0U1RQV1 116 aa11.04□□□□□ -0.64
TNIP1-220ENST00000610535 NKAPP1Q8N9T2 125 aa11.03□□□□□ -0.64
TNIP1-220ENST00000610535 KCNQ1DNQ9H478 68 aa11.03□□□□□ -0.64
TNIP1-220ENST00000610535 SYCNQ0VAF6 134 aa11.03□□□□□ -0.64
TNIP1-220ENST00000610535 FAM30AQ9NZY2 134 aa11.02□□□□□ -0.64
TNIP1-220ENST00000610535 RPL37AP8A6NKH3 93 aa11.02□□□□□ -0.65
TNIP1-220ENST00000610535 ATP5EP56381 51 aaPredicted RBP11.01□□□□□ -0.65
TNIP1-220ENST00000610535 NBEAL1Q6ZS30 2694 aa11.01□□□□□ -0.65
TNIP1-220ENST00000610535 IGLV5-48A0A075B6I7 105 aa11□□□□□ -0.65
TNIP1-220ENST00000610535 SMIM29Q86T20 159 aa11□□□□□ -0.65
TNIP1-220ENST00000610535 FUSP35637 526 aaKnown RBP eCLIP11□□□□□ -0.65
TNIP1-220ENST00000610535 A0A1W2PNM2 257 aa10.99□□□□□ -0.65
TNIP1-220ENST00000610535 BRK1Q8WUW1 75 aa10.99□□□□□ -0.65
TNIP1-220ENST00000610535 PKIGQ9Y2B9 76 aa10.98□□□□□ -0.65
TNIP1-220ENST00000610535 FAM168BA1KXE4 195 aa10.98□□□□□ -0.65
TNIP1-220ENST00000610535 ST20-AS1Q8NBB2 130 aa10.98□□□□□ -0.65
TNIP1-220ENST00000610535 Q9BRP9 147 aa10.98□□□□□ -0.65
TNIP1-220ENST00000610535 H3BNG1 76 aa10.97□□□□□ -0.65
TNIP1-220ENST00000610535 PRB2P02812 416 aaPredicted RBP10.96□□□□□ -0.66
TNIP1-220ENST00000610535 KRTAP10-11P60412 298 aa10.95□□□□□ -0.66
TNIP1-220ENST00000610535 Q6ZRX8 168 aa10.95□□□□□ -0.66
TNIP1-220ENST00000610535 C1orf137Q5JT78 98 aa10.94□□□□□ -0.66
TNIP1-220ENST00000610535 KRTAP24-1Q3LI83 254 aa10.94□□□□□ -0.66
TNIP1-220ENST00000610535 BAHCC1Q9P281 2608 aa10.93□□□□□ -0.66
TNIP1-220ENST00000610535 LINC01556Q5JQF7 62 aa10.93□□□□□ -0.66
TNIP1-220ENST00000610535 LRCOL1A6NCL2 159 aa10.93□□□□□ -0.66
TNIP1-220ENST00000610535 KRTAP4-16G5E9R7 235 aaPredicted RBP10.92□□□□□ -0.66
TNIP1-220ENST00000610535 DHRS4-AS1Q9P1J3 65 aa10.92□□□□□ -0.66
TNIP1-220ENST00000610535 MGAM2Q2M2H8 2515 aa10.92□□□□□ -0.66
TNIP1-220ENST00000610535 ETDCA0A1B0GVM5 59 aa10.91□□□□□ -0.66
TNIP1-220ENST00000610535 TNP2Q05952 138 aa10.91□□□□□ -0.66
TNIP1-220ENST00000610535 IGLV1-50A0A075B6I6 118 aa10.9□□□□□ -0.66
TNIP1-220ENST00000610535 KRTAP7-1Q8IUC3 87 aa10.9□□□□□ -0.66
TNIP1-220ENST00000610535 CASC10Q5T4H9 136 aa10.89□□□□□ -0.67
TNIP1-220ENST00000610535 Q8NBF4 154 aa10.89□□□□□ -0.67
TNIP1-220ENST00000610535 DEFB131BA0A096LNP1 70 aa10.88□□□□□ -0.67
TNIP1-220ENST00000610535 A0A0G2JQZ4 141 aa10.88□□□□□ -0.67
TNIP1-220ENST00000610535 A0A1W2PNN7 141 aa10.88□□□□□ -0.67
TNIP1-220ENST00000610535 F8WDY8 70 aa10.88□□□□□ -0.67
TNIP1-220ENST00000610535 DSCR10P59022 87 aa10.88□□□□□ -0.67
TNIP1-220ENST00000610535 K7EQZ3 153 aa10.87□□□□□ -0.67
TNIP1-220ENST00000610535 SPRR1AP35321 89 aa10.86□□□□□ -0.67
TNIP1-220ENST00000610535 CMYA5Q8N3K9 4069 aa10.86□□□□□ -0.67
TNIP1-220ENST00000610535 TLX1NBP0CAT3 122 aa10.85□□□□□ -0.67
TNIP1-220ENST00000610535 PRR4Q16378 134 aa10.85□□□□□ -0.67
TNIP1-220ENST00000610535 A0A1B0GW54 56 aa10.84□□□□□ -0.67
TNIP1-220ENST00000610535 UBE2BP63146 152 aa10.84□□□□□ -0.67
TNIP1-220ENST00000610535 SPRR4Q96PI1 79 aa10.84□□□□□ -0.67
TNIP1-220ENST00000610535 PLA2G2DQ9UNK4 145 aa10.84□□□□□ -0.67
TNIP1-220ENST00000610535 LCE6AA0A183 80 aa10.83□□□□□ -0.68
TNIP1-220ENST00000610535 DEFB116Q30KQ4 102 aa10.83□□□□□ -0.68
TNIP1-220ENST00000610535 DNAH10OSP0CZ25 163 aa10.82□□□□□ -0.68
TNIP1-220ENST00000610535 C11orf45Q8TAV5 145 aa10.82□□□□□ -0.68
TNIP1-220ENST00000610535 MRPL55Q7Z7F7 128 aaKnown RBP10.8□□□□□ -0.68
TNIP1-220ENST00000610535 IGLV5-37A0A075B6J1 123 aa10.8□□□□□ -0.68
TNIP1-220ENST00000610535 hDV103S1A0JD37 113 aa10.8□□□□□ -0.68
TNIP1-220ENST00000610535 C1orf64Q8NEQ6 169 aa10.8□□□□□ -0.68
TNIP1-220ENST00000610535 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.79□□□□□ -0.68
TNIP1-220ENST00000610535 ZCCHC13Q8WW36 166 aaKnown RBP10.79□□□□□ -0.68
TNIP1-220ENST00000610535 LINC00476Q8WZB0 136 aa10.78□□□□□ -0.68
TNIP1-220ENST00000610535 LINC00588Q9Y4M8 146 aa10.76□□□□□ -0.69
TNIP1-220ENST00000610535 HCG22E2RYF7 251 aa10.75□□□□□ -0.69
TNIP1-220ENST00000610535 PSCAO43653 123 aa10.75□□□□□ -0.69
TNIP1-220ENST00000610535 WFDC13Q8IUB5 93 aa10.75□□□□□ -0.69
TNIP1-220ENST00000610535 REG3GQ6UW15 175 aa10.74□□□□□ -0.69
TNIP1-220ENST00000610535 IGFL1Q6UW32 110 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms