RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 RPS10P5Q9NQ39 176 aa9.3□□□□□ -0.92
CHMP4A-211ENST00000609024 NDUFC2O95298 119 aa9.29□□□□□ -0.92
CHMP4A-211ENST00000609024 CLLU1Q5K131 121 aa9.28□□□□□ -0.92
CHMP4A-211ENST00000609024 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.26□□□□□ -0.93
CHMP4A-211ENST00000609024 H0Y8G0 127 aa9.26□□□□□ -0.93
CHMP4A-211ENST00000609024 RPL37P61927 97 aaKnown RBP9.26□□□□□ -0.93
CHMP4A-211ENST00000609024 LEPROTO15243 131 aa9.25□□□□□ -0.93
CHMP4A-211ENST00000609024 CHCHD1Q96BP2 118 aaKnown RBP9.25□□□□□ -0.93
CHMP4A-211ENST00000609024 H7C2G1 150 aa9.24□□□□□ -0.93
CHMP4A-211ENST00000609024 SPRR1BP22528 89 aa9.24□□□□□ -0.93
CHMP4A-211ENST00000609024 CD164Q04900 197 aa9.24□□□□□ -0.93
CHMP4A-211ENST00000609024 RHEBQ15382 184 aa9.24□□□□□ -0.93
CHMP4A-211ENST00000609024 PRO1933Q9H354 126 aa9.24□□□□□ -0.93
CHMP4A-211ENST00000609024 DHRS4-AS1Q9P1J3 65 aa9.24□□□□□ -0.93
CHMP4A-211ENST00000609024 NPC2P61916 151 aa9.23□□□□□ -0.93
CHMP4A-211ENST00000609024 J3QQQ9 107 aa9.22□□□□□ -0.93
CHMP4A-211ENST00000609024 LGALS3P17931 250 aaKnown RBP9.22□□□□□ -0.93
CHMP4A-211ENST00000609024 NMUP48645 174 aa9.22□□□□□ -0.93
CHMP4A-211ENST00000609024 TSPEAR-AS2P59090 65 aa9.22□□□□□ -0.93
CHMP4A-211ENST00000609024 HERVK_113P61574 105 aa9.22□□□□□ -0.93
CHMP4A-211ENST00000609024 TAL2Q16559 108 aa9.22□□□□□ -0.93
CHMP4A-211ENST00000609024 Q6Q795 121 aa9.22□□□□□ -0.93
CHMP4A-211ENST00000609024 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.94
CHMP4A-211ENST00000609024 Q1RN00 199 aa9.2□□□□□ -0.94
CHMP4A-211ENST00000609024 DEFB105AQ8NG35 78 aa9.2□□□□□ -0.94
CHMP4A-211ENST00000609024 FLGP20930 4061 aaPredicted RBP9.2□□□□□ -0.94
CHMP4A-211ENST00000609024 HSBP1O75506 76 aa9.19□□□□□ -0.94
CHMP4A-211ENST00000609024 PLNP26678 52 aa9.18□□□□□ -0.94
CHMP4A-211ENST00000609024 AKR1D1P51857 326 aa9.18□□□□□ -0.94
CHMP4A-211ENST00000609024 C1orf195Q5TG92 126 aa9.16□□□□□ -0.94
CHMP4A-211ENST00000609024 CFC1P0CG37 223 aa9.15□□□□□ -0.94
CHMP4A-211ENST00000609024 Q5XG85 94 aa9.15□□□□□ -0.94
CHMP4A-211ENST00000609024 TEX49A0A1B0GTD5 131 aa9.14□□□□□ -0.95
CHMP4A-211ENST00000609024 COX7BP24311 80 aa9.14□□□□□ -0.95
CHMP4A-211ENST00000609024 SOSTDC1Q6X4U4 206 aa9.14□□□□□ -0.95
CHMP4A-211ENST00000609024 DPM2O94777 84 aa9.12□□□□□ -0.95
CHMP4A-211ENST00000609024 LEPROTL1O95214 131 aa9.12□□□□□ -0.95
CHMP4A-211ENST00000609024 SMIM29Q86T20 159 aa9.12□□□□□ -0.95
CHMP4A-211ENST00000609024 SPANXCQ9NY87 97 aa9.12□□□□□ -0.95
CHMP4A-211ENST00000609024 TCL1BO95988 128 aa9.11□□□□□ -0.95
CHMP4A-211ENST00000609024 ADAMTSL4-AS1Q5T5F5 129 aa9.11□□□□□ -0.95
CHMP4A-211ENST00000609024 A0A0J9YXY3 114 aa9.1□□□□□ -0.95
CHMP4A-211ENST00000609024 EIF4EBP3O60516 100 aaPredicted RBP9.09□□□□□ -0.95
CHMP4A-211ENST00000609024 IGKCP01834 107 aa9.09□□□□□ -0.95
CHMP4A-211ENST00000609024 ELOF1P60002 83 aaKnown RBP9.09□□□□□ -0.95
CHMP4A-211ENST00000609024 C10orf91Q5T1B1 145 aa9.09□□□□□ -0.95
CHMP4A-211ENST00000609024 ATP11AUNQ6ZP68 121 aa9.09□□□□□ -0.95
CHMP4A-211ENST00000609024 SPANXDQ9BXN6 97 aa9.09□□□□□ -0.95
CHMP4A-211ENST00000609024 C6orf99Q4VX62 202 aa9.08□□□□□ -0.96
CHMP4A-211ENST00000609024 PMCHL2Q9BQD1 86 aa9.07□□□□□ -0.96
CHMP4A-211ENST00000609024 LINC00308Q8TCZ7 52 aa9.06□□□□□ -0.96
CHMP4A-211ENST00000609024 HSPB8Q9UJY1 196 aa9.06□□□□□ -0.96
CHMP4A-211ENST00000609024 PCP2Q8IVA1 136 aa9.05□□□□□ -0.96
CHMP4A-211ENST00000609024 LINC00518Q8N0U6 118 aa9.05□□□□□ -0.96
CHMP4A-211ENST00000609024 A0A0G2JQZ4 141 aa9.04□□□□□ -0.96
CHMP4A-211ENST00000609024 USH2AO75445 5202 aa9.04□□□□□ -0.96
CHMP4A-211ENST00000609024 SNAPINO95295 136 aa9.03□□□□□ -0.96
CHMP4A-211ENST00000609024 APOC3P02656 99 aa9.03□□□□□ -0.96
CHMP4A-211ENST00000609024 FABP4P15090 132 aa9.03□□□□□ -0.96
CHMP4A-211ENST00000609024 NDUFA5Q16718 116 aa9.03□□□□□ -0.96
CHMP4A-211ENST00000609024 SSPOA2VEC9 5147 aa9.03□□□□□ -0.96
CHMP4A-211ENST00000609024 C20orf202A1L168 122 aa9□□□□□ -0.97
CHMP4A-211ENST00000609024 E9PLD3 99 aa9□□□□□ -0.97
CHMP4A-211ENST00000609024 SVBPQ8N300 66 aa9□□□□□ -0.97
CHMP4A-211ENST00000609024 TRBV7-6A0A0J9YX20 115 aa8.99□□□□□ -0.97
CHMP4A-211ENST00000609024 A0A1B0GWB2 263 aa8.99□□□□□ -0.97
CHMP4A-211ENST00000609024 F8WEM9 126 aa8.99□□□□□ -0.97
CHMP4A-211ENST00000609024 TIMM17BO60830 172 aa8.98□□□□□ -0.97
CHMP4A-211ENST00000609024 IGLV5-48A0A075B6I7 105 aa8.97□□□□□ -0.97
CHMP4A-211ENST00000609024 SERF1AO75920 110 aa8.97□□□□□ -0.97
CHMP4A-211ENST00000609024 OBSCN-AS1Q96MR7 158 aa8.97□□□□□ -0.97
CHMP4A-211ENST00000609024 TRBV20-1A0A075B6N2 111 aa8.96□□□□□ -0.98
CHMP4A-211ENST00000609024 Q75L30 129 aa8.96□□□□□ -0.98
CHMP4A-211ENST00000609024 NHP2Q9NX24 153 aaKnown RBP8.96□□□□□ -0.98
CHMP4A-211ENST00000609024 LITAFQ99732 161 aa8.95□□□□□ -0.98
CHMP4A-211ENST00000609024 KRTAP9-8Q9BYQ0 159 aa8.95□□□□□ -0.98
CHMP4A-211ENST00000609024 A4D1N5 150 aa8.93□□□□□ -0.98
CHMP4A-211ENST00000609024 A6NDN8 102 aa8.93□□□□□ -0.98
CHMP4A-211ENST00000609024 ZNF815PA8K554 130 aa8.93□□□□□ -0.98
CHMP4A-211ENST00000609024 FCGBPQ9Y6R7 5405 aaPredicted RBP8.93□□□□□ -0.98
CHMP4A-211ENST00000609024 COPS9Q8WXC6 57 aa8.92□□□□□ -0.98
CHMP4A-211ENST00000609024 TRGC2P03986 189 aa8.91□□□□□ -0.98
CHMP4A-211ENST00000609024 SYNE2Q8WXH0 6885 aaKnown RBP8.91□□□□□ -0.98
CHMP4A-211ENST00000609024 YPEL4Q96NS1 127 aa8.9□□□□□ -0.98
CHMP4A-211ENST00000609024 Q96NJ1 140 aa8.89□□□□□ -0.99
CHMP4A-211ENST00000609024 LINC00310P59036 64 aa8.88□□□□□ -0.99
CHMP4A-211ENST00000609024 Q6JHZ5 121 aa8.87□□□□□ -0.99
CHMP4A-211ENST00000609024 KRTAP19-1Q8IUB9 90 aa8.87□□□□□ -0.99
CHMP4A-211ENST00000609024 MACF1Q9UPN3 7388 aaKnown RBP8.86□□□□□ -0.99
CHMP4A-211ENST00000609024 TRBV7-7A0A0K0K1E9 115 aa8.86□□□□□ -0.99
CHMP4A-211ENST00000609024 SCGB1D4Q6XE38 83 aa8.86□□□□□ -0.99
CHMP4A-211ENST00000609024 SLC7A5P1Q8MH63 180 aa8.85□□□□□ -0.99
CHMP4A-211ENST00000609024 CLEC2BQ92478 149 aa8.85□□□□□ -0.99
CHMP4A-211ENST00000609024 FAM236DA0A1B0GTK5 79 aa8.84□□□□□ -0.99
CHMP4A-211ENST00000609024 FAM236CP0DP71 79 aa8.84□□□□□ -0.99
CHMP4A-211ENST00000609024 LINC00846Q9NV44 126 aa8.84□□□□□ -0.99
CHMP4A-211ENST00000609024 TRAV13-2A0A0B4J235 113 aa8.82□□□□□ -1
CHMP4A-211ENST00000609024 SYS1-DBNDD2H3BUS1 97 aa8.82□□□□□ -1
CHMP4A-211ENST00000609024 LST1O00453 97 aa8.82□□□□□ -1
CHMP4A-211ENST00000609024 VAMP3Q15836 100 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms