RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 KCNQ1DNQ9H478 68 aa13.78□□□□□ -0.2
USF2-216ENST00000607959 RYR3Q15413 4870 aa13.78□□□□□ -0.2
USF2-216ENST00000607959 PKHD1P08F94 4074 aa13.77□□□□□ -0.2
USF2-216ENST00000607959 LST1O00453 97 aa13.77□□□□□ -0.21
USF2-216ENST00000607959 PCP4P48539 62 aa13.77□□□□□ -0.21
USF2-216ENST00000607959 ZNF73O43830 326 aaPredicted RBP13.76□□□□□ -0.21
USF2-216ENST00000607959 PHF5AQ7RTV0 110 aaKnown RBP13.76□□□□□ -0.21
USF2-216ENST00000607959 KRTAP11-1Q8IUC1 163 aa13.76□□□□□ -0.21
USF2-216ENST00000607959 MTURNQ8N3F0 131 aa13.74□□□□□ -0.21
USF2-216ENST00000607959 A0A087WYN8 130 aa13.74□□□□□ -0.21
USF2-216ENST00000607959 SMCPP49901 116 aaPredicted RBP13.74□□□□□ -0.21
USF2-216ENST00000607959 ATXN8Q156A1 80 aa13.74□□□□□ -0.21
USF2-216ENST00000607959 C21orf62-AS1Q17RA5 79 aa13.74□□□□□ -0.21
USF2-216ENST00000607959 LINC00336Q6ZUF6 198 aa13.74□□□□□ -0.21
USF2-216ENST00000607959 H0YGX0 51 aa13.73□□□□□ -0.21
USF2-216ENST00000607959 KRTAP10-1P60331 282 aa13.72□□□□□ -0.21
USF2-216ENST00000607959 FAM30AQ9NZY2 134 aa13.72□□□□□ -0.21
USF2-216ENST00000607959 DIRC1Q969H9 104 aa13.72□□□□□ -0.21
USF2-216ENST00000607959 A0A1B0GVY2 172 aa13.71□□□□□ -0.21
USF2-216ENST00000607959 KRTAP4-16G5E9R7 235 aaPredicted RBP13.71□□□□□ -0.21
USF2-216ENST00000607959 SPRR1AP35321 89 aa13.7□□□□□ -0.22
USF2-216ENST00000607959 DPH3Q96FX2 82 aa13.7□□□□□ -0.22
USF2-216ENST00000607959 PRYO14603 147 aa13.7□□□□□ -0.22
USF2-216ENST00000607959 PLAC8Q9NZF1 115 aa13.69□□□□□ -0.22
USF2-216ENST00000607959 LRP1BQ9NZR2 4599 aa13.68□□□□□ -0.22
USF2-216ENST00000607959 ELOF1P60002 83 aaKnown RBP13.68□□□□□ -0.22
USF2-216ENST00000607959 TRBV7-6A0A0J9YX20 115 aa13.67□□□□□ -0.22
USF2-216ENST00000607959 DYNC1H1Q14204 4646 aaKnown RBP13.67□□□□□ -0.22
USF2-216ENST00000607959 TRACP01848 142 aa13.66□□□□□ -0.22
USF2-216ENST00000607959 OCIAD2Q56VL3 154 aa13.66□□□□□ -0.22
USF2-216ENST00000607959 LINC00575Q6W349 94 aa13.66□□□□□ -0.22
USF2-216ENST00000607959 Q6ZSA8 131 aa13.66□□□□□ -0.22
USF2-216ENST00000607959 C9JAW5 83 aa13.65□□□□□ -0.22
USF2-216ENST00000607959 COX7BP24311 80 aa13.65□□□□□ -0.22
USF2-216ENST00000607959 LINC00528Q8N1L1 170 aa13.65□□□□□ -0.22
USF2-216ENST00000607959 LINC01600Q96MT4 127 aa13.64□□□□□ -0.23
USF2-216ENST00000607959 ETDBQ3ZM63 59 aa13.63□□□□□ -0.23
USF2-216ENST00000607959 REG3GQ6UW15 175 aa13.63□□□□□ -0.23
USF2-216ENST00000607959 B5MCH6 92 aa13.62□□□□□ -0.23
USF2-216ENST00000607959 SLC25A20O43772 301 aa13.62□□□□□ -0.23
USF2-216ENST00000607959 UBE2BP63146 152 aa13.61□□□□□ -0.23
USF2-216ENST00000607959 CIRBP-AS1Q8TBR5 109 aa13.6□□□□□ -0.23
USF2-216ENST00000607959 A0A1B0GX51 115 aa13.59□□□□□ -0.23
USF2-216ENST00000607959 Q6ZRX8 168 aa13.58□□□□□ -0.23
USF2-216ENST00000607959 Q9BRP9 147 aa13.58□□□□□ -0.24
USF2-216ENST00000607959 ETDCA0A1B0GVM5 59 aa13.57□□□□□ -0.24
USF2-216ENST00000607959 hADV29S1A0JD25 119 aa13.57□□□□□ -0.24
USF2-216ENST00000607959 HAMPP81172 84 aa13.57□□□□□ -0.24
USF2-216ENST00000607959 SCXQ7RTU7 201 aa13.57□□□□□ -0.24
USF2-216ENST00000607959 ANKRD29Q8N6D5 301 aa13.57□□□□□ -0.24
USF2-216ENST00000607959 K7ERU9 68 aa13.55□□□□□ -0.24
USF2-216ENST00000607959 TEN1Q86WV5 123 aa13.55□□□□□ -0.24
USF2-216ENST00000607959 H3BT86 120 aa13.53□□□□□ -0.24
USF2-216ENST00000607959 DNAL4O96015 105 aa13.53□□□□□ -0.24
USF2-216ENST00000607959 BAALC-AS2P0C853 105 aa13.52□□□□□ -0.25
USF2-216ENST00000607959 PRLHP81277 87 aa13.52□□□□□ -0.25
USF2-216ENST00000607959 FAM19A1Q7Z5A9 133 aa13.52□□□□□ -0.25
USF2-216ENST00000607959 Q6ZQY7 126 aa13.51□□□□□ -0.25
USF2-216ENST00000607959 ERC2-IT1O76042 136 aa13.51□□□□□ -0.25
USF2-216ENST00000607959 INAFM2P0DMQ5 153 aa13.51□□□□□ -0.25
USF2-216ENST00000607959 SMCR5Q8TEV8 140 aa13.51□□□□□ -0.25
USF2-216ENST00000607959 APOBP04114 4563 aaKnown RBP13.5□□□□□ -0.25
USF2-216ENST00000607959 PSORS1C2Q9UIG4 136 aa13.5□□□□□ -0.25
USF2-216ENST00000607959 SRRM2Q9UQ35 2752 aaKnown RBP13.5□□□□□ -0.25
USF2-216ENST00000607959 KRTAP13-1Q8IUC0 172 aa13.49□□□□□ -0.25
USF2-216ENST00000607959 BCE1O60756 84 aa13.48□□□□□ -0.25
USF2-216ENST00000607959 ORMDL1Q9P0S3 153 aa13.48□□□□□ -0.25
USF2-216ENST00000607959 DHRS4-AS1Q9P1J3 65 aa13.48□□□□□ -0.25
USF2-216ENST00000607959 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.47□□□□□ -0.25
USF2-216ENST00000607959 PPDPFLQ8WWR9 84 aa13.47□□□□□ -0.25
USF2-216ENST00000607959 SNCGO76070 127 aa13.45□□□□□ -0.26
USF2-216ENST00000607959 H0Y9J4 135 aa13.45□□□□□ -0.26
USF2-216ENST00000607959 VPS25Q9BRG1 176 aa13.45□□□□□ -0.26
USF2-216ENST00000607959 LINC01547P58512 204 aaPredicted RBP13.43□□□□□ -0.26
USF2-216ENST00000607959 ST20-AS1Q8NBB2 130 aa13.43□□□□□ -0.26
USF2-216ENST00000607959 J3QR89 54 aa13.41□□□□□ -0.26
USF2-216ENST00000607959 XGP55808 180 aa13.41□□□□□ -0.26
USF2-216ENST00000607959 HIGD2AQ9BW72 106 aa13.41□□□□□ -0.26
USF2-216ENST00000607959 UBE2AP49459 152 aa13.4□□□□□ -0.26
USF2-216ENST00000607959 C1orf137Q5JT78 98 aa13.4□□□□□ -0.26
USF2-216ENST00000607959 TEX49A0A1B0GTD5 131 aa13.39□□□□□ -0.27
USF2-216ENST00000607959 VPS13BQ7Z7G8 4022 aa13.39□□□□□ -0.27
USF2-216ENST00000607959 TMEM256-PLSCR3K7ERE1 68 aa13.38□□□□□ -0.27
USF2-216ENST00000607959 Q8N377 158 aa13.37□□□□□ -0.27
USF2-216ENST00000607959 IGLV5-48A0A075B6I7 105 aa13.35□□□□□ -0.27
USF2-216ENST00000607959 DEFB105AQ8NG35 78 aa13.35□□□□□ -0.27
USF2-216ENST00000607959 OBSCN-AS1Q96MR7 158 aa13.34□□□□□ -0.27
USF2-216ENST00000607959 IGLV7-43P04211 117 aa13.32□□□□□ -0.28
USF2-216ENST00000607959 A0A1B0GV72 72 aa13.31□□□□□ -0.28
USF2-216ENST00000607959 ZNF861PO60384 105 aa13.31□□□□□ -0.28
USF2-216ENST00000607959 FAT1Q14517 4588 aa13.3□□□□□ -0.28
USF2-216ENST00000607959 H3BQ85 93 aa13.29□□□□□ -0.28
USF2-216ENST00000607959 C3orf22Q8N5N4 141 aa13.29□□□□□ -0.28
USF2-216ENST00000607959 EPPK1P58107 5090 aaKnown RBP13.28□□□□□ -0.28
USF2-216ENST00000607959 SMIM29Q86T20 159 aa13.27□□□□□ -0.28
USF2-216ENST00000607959 NDUFV3P56181 108 aaKnown RBP13.27□□□□□ -0.29
USF2-216ENST00000607959 LAMTOR3Q9UHA4 124 aa13.25□□□□□ -0.29
USF2-216ENST00000607959 GHRHP01286 108 aa13.25□□□□□ -0.29
USF2-216ENST00000607959 C14orf132Q9NPU4 83 aa13.25□□□□□ -0.29
USF2-216ENST00000607959 SMR3BP02814 79 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms