RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 PHF5AQ7RTV0 110 aaKnown RBP6.53□□□□□ -1.36
CSMD1-217ENST00000602723 C10orf142B7Z368 130 aa6.53□□□□□ -1.36
CSMD1-217ENST00000602723 CYP4F30PQ9H0H9 118 aa6.53□□□□□ -1.36
CSMD1-217ENST00000602723 Q6ZRP5 223 aa6.52□□□□□ -1.37
CSMD1-217ENST00000602723 H3BNG1 76 aa6.52□□□□□ -1.37
CSMD1-217ENST00000602723 TYMSOSQ8TAI1 123 aa6.52□□□□□ -1.37
CSMD1-217ENST00000602723 Q96NJ1 140 aa6.51□□□□□ -1.37
CSMD1-217ENST00000602723 FAM229AH3BQW9 127 aa6.51□□□□□ -1.37
CSMD1-217ENST00000602723 K7EQZ3 153 aa6.51□□□□□ -1.37
CSMD1-217ENST00000602723 UQCR11O14957 56 aa6.5□□□□□ -1.37
CSMD1-217ENST00000602723 RTL8CO15255 209 aa6.5□□□□□ -1.37
CSMD1-217ENST00000602723 FAM168BA1KXE4 195 aa6.5□□□□□ -1.37
CSMD1-217ENST00000602723 A8MUN3 132 aa6.5□□□□□ -1.37
CSMD1-217ENST00000602723 DNAH12Q6ZR08 3092 aa6.49□□□□□ -1.37
CSMD1-217ENST00000602723 LITAFQ99732 161 aa6.49□□□□□ -1.37
CSMD1-217ENST00000602723 CRIPTQ9P021 101 aa6.48□□□□□ -1.37
CSMD1-217ENST00000602723 MIR22HGQ0VDD5 57 aa6.46□□□□□ -1.37
CSMD1-217ENST00000602723 NBDYA0A0U1RRE5 68 aa6.46□□□□□ -1.38
CSMD1-217ENST00000602723 KLKP1Q107X0 134 aa6.45□□□□□ -1.38
CSMD1-217ENST00000602723 Q8NAQ8 132 aa6.45□□□□□ -1.38
CSMD1-217ENST00000602723 LINC00588Q9Y4M8 146 aa6.45□□□□□ -1.38
CSMD1-217ENST00000602723 DNAH10OSP0CZ25 163 aa6.45□□□□□ -1.38
CSMD1-217ENST00000602723 A0A0C4DFX4 3053 aa6.45□□□□□ -1.38
CSMD1-217ENST00000602723 ITPR2Q14571 2701 aa6.44□□□□□ -1.38
CSMD1-217ENST00000602723 MRPL34Q9BQ48 92 aaKnown RBP6.44□□□□□ -1.38
CSMD1-217ENST00000602723 APLNQ9ULZ1 77 aa6.44□□□□□ -1.38
CSMD1-217ENST00000602723 PRR15Q8IV56 129 aa6.43□□□□□ -1.38
CSMD1-217ENST00000602723 KCNQ1DNQ9H478 68 aa6.43□□□□□ -1.38
CSMD1-217ENST00000602723 CD164Q04900 197 aa6.42□□□□□ -1.38
CSMD1-217ENST00000602723 KTN1-AS1Q86SY8 53 aa6.42□□□□□ -1.38
CSMD1-217ENST00000602723 NBEAL2Q6ZNJ1 2754 aa6.41□□□□□ -1.38
CSMD1-217ENST00000602723 LINC00336Q6ZUF6 198 aa6.41□□□□□ -1.38
CSMD1-217ENST00000602723 IGFL1Q6UW32 110 aa6.4□□□□□ -1.38
CSMD1-217ENST00000602723 H7BZZ5 65 aa6.4□□□□□ -1.39
CSMD1-217ENST00000602723 LINC00528Q8N1L1 170 aa6.4□□□□□ -1.39
CSMD1-217ENST00000602723 APCP25054 2843 aa6.39□□□□□ -1.39
CSMD1-217ENST00000602723 OBSCN-AS1Q96MR7 158 aa6.39□□□□□ -1.39
CSMD1-217ENST00000602723 C8orf17Q9NRJ1 99 aa6.39□□□□□ -1.39
CSMD1-217ENST00000602723 A0A1B0GVX0 72 aa6.39□□□□□ -1.39
CSMD1-217ENST00000602723 UTP20O75691 2785 aaKnown RBP6.39□□□□□ -1.39
CSMD1-217ENST00000602723 NSD1Q96L73 2696 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-217ENST00000602723 DSCR10P59022 87 aa6.38□□□□□ -1.39
CSMD1-217ENST00000602723 CFAP54Q96N23 3096 aa6.38□□□□□ -1.39
CSMD1-217ENST00000602723 IGLV1-50A0A075B6I6 118 aa6.38□□□□□ -1.39
CSMD1-217ENST00000602723 C9orf129Q5T035 196 aaKnown RBP6.36□□□□□ -1.39
CSMD1-217ENST00000602723 LINC00304Q8N9R0 145 aa6.35□□□□□ -1.39
CSMD1-217ENST00000602723 COX6B2Q6YFQ2 88 aa6.35□□□□□ -1.39
CSMD1-217ENST00000602723 LCA10Q71F78 164 aa6.34□□□□□ -1.39
CSMD1-217ENST00000602723 KMT2BQ9UMN6 2715 aaPredicted RBP6.34□□□□□ -1.39
CSMD1-217ENST00000602723 EIF4EBP3O60516 100 aaPredicted RBP6.34□□□□□ -1.39
CSMD1-217ENST00000602723 C15orf56Q8N910 161 aa6.33□□□□□ -1.4
CSMD1-217ENST00000602723 TRANK1O15050 2925 aa6.33□□□□□ -1.4
CSMD1-217ENST00000602723 CDC42SE1Q9NRR8 79 aa6.33□□□□□ -1.4
CSMD1-217ENST00000602723 CSNK1G2-AS1Q8NCQ2 148 aa6.33□□□□□ -1.4
CSMD1-217ENST00000602723 SPANXA2-OT1Q8N9U9 137 aa6.32□□□□□ -1.4
CSMD1-217ENST00000602723 Q8N377 158 aa6.32□□□□□ -1.4
CSMD1-217ENST00000602723 C9orf92A6NGG3 77 aa6.32□□□□□ -1.4
CSMD1-217ENST00000602723 GOLGB1Q14789 3259 aaKnown RBP6.32□□□□□ -1.4
CSMD1-217ENST00000602723 ITPR1Q14643 2758 aa6.31□□□□□ -1.4
CSMD1-217ENST00000602723 A0A0D9SG42 100 aa6.31□□□□□ -1.4
CSMD1-217ENST00000602723 A0A0G2JQZ4 141 aa6.31□□□□□ -1.4
CSMD1-217ENST00000602723 A0A1W2PNN7 141 aa6.31□□□□□ -1.4
CSMD1-217ENST00000602723 KLK9Q2XQG4 91 aa6.3□□□□□ -1.4
CSMD1-217ENST00000602723 ZNF861PO60384 105 aa6.3□□□□□ -1.4
CSMD1-217ENST00000602723 UBR5O95071 2799 aaPredicted RBP6.3□□□□□ -1.4
CSMD1-217ENST00000602723 PRR34Q9NV39 138 aa6.29□□□□□ -1.4
CSMD1-217ENST00000602723 J3QL48 77 aa6.28□□□□□ -1.4
CSMD1-217ENST00000602723 FAM104AQ969W3 186 aa6.28□□□□□ -1.4
CSMD1-217ENST00000602723 KRTAP24-1Q3LI83 254 aa6.28□□□□□ -1.4
CSMD1-217ENST00000602723 C5orf42Q9H799 3197 aa6.28□□□□□ -1.4
CSMD1-217ENST00000602723 LUZP6Q538Z0 58 aa6.27□□□□□ -1.41
CSMD1-217ENST00000602723 LINC01554Q52M75 96 aa6.26□□□□□ -1.41
CSMD1-217ENST00000602723 PLA2G2DQ9UNK4 145 aa6.26□□□□□ -1.41
CSMD1-217ENST00000602723 PCNTO95613 3336 aa6.26□□□□□ -1.41
CSMD1-217ENST00000602723 Q8N1X5 172 aa6.25□□□□□ -1.41
CSMD1-217ENST00000602723 IGSF10Q6WRI0 2623 aa6.24□□□□□ -1.41
CSMD1-217ENST00000602723 TLX1NBP0CAT3 122 aa6.24□□□□□ -1.41
CSMD1-217ENST00000602723 Q1T7F1 81 aa6.24□□□□□ -1.41
CSMD1-217ENST00000602723 ANAPC11Q9NYG5 84 aa6.24□□□□□ -1.41
CSMD1-217ENST00000602723 IGLV5-48A0A075B6I7 105 aa6.24□□□□□ -1.41
CSMD1-217ENST00000602723 DSPP15924 2871 aaKnown RBP6.23□□□□□ -1.41
CSMD1-217ENST00000602723 IGLV5-37A0A075B6J1 123 aa6.23□□□□□ -1.41
CSMD1-217ENST00000602723 WWC2-AS2Q96NR7 200 aa6.23□□□□□ -1.41
CSMD1-217ENST00000602723 KRTAP10-11P60412 298 aa6.22□□□□□ -1.41
CSMD1-217ENST00000602723 SPRR4Q96PI1 79 aa6.21□□□□□ -1.41
CSMD1-217ENST00000602723 RBM12B-AS1Q9P1G2 102 aa6.21□□□□□ -1.41
CSMD1-217ENST00000602723 MGAQ8IWI9 3026 aa6.21□□□□□ -1.42
CSMD1-217ENST00000602723 GIG44P09565 113 aaPredicted RBP6.21□□□□□ -1.42
CSMD1-217ENST00000602723 A0A1W2PNM2 257 aa6.19□□□□□ -1.42
CSMD1-217ENST00000602723 OCR1Q9BZK8 76 aa6.19□□□□□ -1.42
CSMD1-217ENST00000602723 IGLV7-43P04211 117 aa6.19□□□□□ -1.42
CSMD1-217ENST00000602723 A0A087WTM6 91 aa6.19□□□□□ -1.42
CSMD1-217ENST00000602723 PSORS1C2Q9UIG4 136 aa6.19□□□□□ -1.42
CSMD1-217ENST00000602723 LINC00612Q8N6U2 182 aa6.18□□□□□ -1.42
CSMD1-217ENST00000602723 K7EIL1 84 aa6.18□□□□□ -1.42
CSMD1-217ENST00000602723 LAMA2P24043 3122 aaKnown RBP6.17□□□□□ -1.42
CSMD1-217ENST00000602723 C9orf163Q8N9P6 203 aa6.17□□□□□ -1.42
CSMD1-217ENST00000602723 CNBPP62633 177 aaKnown RBP6.17□□□□□ -1.42
CSMD1-217ENST00000602723 Q75L30 129 aa6.16□□□□□ -1.42
CSMD1-217ENST00000602723 C19orf73Q9NVV2 129 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms